Oenanthe melanoleuca (Eastern black-eared wheatear): 130258550
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Entry
130258550 CDS
T09236
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oma04515
]
130258550
Cell adhesion molecules [BR:
oma04515
]
Cadherins
Protocadherins
130258550
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
130258550
NCBI-ProteinID:
XP_056358001
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Position
13:18575063..18578460
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AA seq
814 aa
AA seq
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MAIARQVLCLSAFLALPLARAEPIRYSVAEEAESGSLVGKLAEDAGLTPPQLSARRARLL
SEDGRQHLRLDRGSGRLLVAGRLDREELCAHSATCMLPFELLLSDPLQFFRVEVTLNDIN
DHSPVFSEERVIFDVLETSEIGSRFPLEGARDLDIGSNAVQAYSISPKNEYFRVSQGRRN
DDDKYVELVLEKALDREEQAEMSFSLIAVDGGSPPRSGTTEVKIVILDVNDNAPSFTKDV
YIAQVLENMPEGSLVLTVLATDQDAGVYRDISYQLSQAEGQSHSAFVIDPRTGEIKQTKP
LDFEEAETHELRVRARDGGGLSAICKVLVEVVDVNDNAPELTVSSFSSPLPENTVPGTVV
ALFTVRDRDSGANGKISCALDDQLFFSLRPAYKNYYELVTVSALDREHTARYVLSVTAAD
AGSPPLTSTHTFTVDISDVNDNAPVFNQTSYTMYVRENNAPTVFVGAVSAADADVGLNAK
VTYSLAPVAAAERPSCSCISVNSENGHVFVLRPLDYERLRQNEVTVSASDAGSPPLRANV
TVRLVVLDENDNAPLVLYPAQDSSPASSELVPVSAEPGYLITKVVAVDADSGQNSWLSYH
LLRATEPGLFSVGVQSGEVRLKRPVTERDSVKHKLLVLVRDNGKPPLSATAALSALLLKD
FSDVRLPHSSPPADEQGDSLTTYLIISLVFVSLLFLISSALFVARKVCKSKELKAAHVLS
GAHNLQSGLADAAAAGTLPRAYCYEISLTTGSGNSEFQFLKPILPSLPAQHCATGQGPQE
QQQDFPCVPVSTEDMAPDNAGTLSARQFNALAFN
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctctgctttcctggcgctgccgctcgctcgc
gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtcggcaag
ctggcggaggacgcggggctgacgccgccgcagctgtcggctcgccgcgcccgcctgctc
tcggaggacggccggcagcatttgcgcttagaccgcggctccggccgcctcctcgtggcg
gggaggctcgaccgggaggagctgtgcgcccactcggccacctgcatgctccccttcgag
ctgctgctctccgaccccctgcagttctttcgggttgaggtgactctgaacgatatcaat
gaccattcgcccgttttttccgaggaacgagtaatatttgatgtcctggaaacgagcgag
ataggctctcgtttcccactggagggtgctcgggatctcgatatcggcagcaatgcagtg
caggcatacagcatctctccaaaaaacgagtattttagagtttctcaagggagacggaat
gatgatgacaaatatgttgaactggtgttggaaaaggcgctagatagggaggagcaggca
gagatgagtttcagtctcattgctgtagatgggggctctccacccaggagcggcaccacc
gaagtgaaaattgtcattctagatgtaaatgacaatgctcccagcttcacaaaagacgtg
tatattgcacaagttctggagaacatgccagagggctcattggttctgactgtgctggca
acagatcaggatgcaggagtttacagggacatctcatatcaactcagccaggcagaggga
cagagccactcagcatttgtgattgatcccagaactggtgaaattaaacaaacaaaaccc
ctggacttcgaggaagcagagactcatgaactccgtgtcagagccagagatggtgggggg
ctttcagcaatctgcaaagtgctggtggaggtggtggatgtgaatgacaatgccccagag
ctgacggtcagctccttcagcagtcccctccccgagaacacagtgcccggcaccgtggtt
gccctgtttacggtcagggaccgcgattctggtgccaacgggaagatctcgtgtgccctg
gacgatcagctcttcttctccctgcggccagcctacaagaattactatgagctggtgaca
gtgagcgcgctggaccgcgagcacacggctcgctacgtgctcagtgtcacagcagcagat
gcgggctcgcctcctctcacaagcacgcacaccttcaccgtggacatctcggacgtcaat
gacaacgcgcccgtcttcaaccagacgtcctacaccatgtacgtgcgggagaacaacgcg
cccacggtgtttgtgggagccgtgagcgctgcagatgctgacgtggggctcaatgccaag
gtgacctattcgctggccccggtggcggcggcagagcggccctcgtgctcctgcatctcg
gtgaactctgagaacggacacgtgtttgtgctgcggcccctggactacgagcgcttgcgg
cagaacgaggtgacggtcagcgcctctgacgcgggctctcctcccctgcgagccaacgtc
accgtgcgcctcgtggtgctggacgagaatgacaatgcaccgctcgtgctctacccggcc
caggacagcagcccagcgtccagcgagctcgtgcccgtgtcggccgagccgggctacctc
atcaccaaagtggtggccgtcgatgccgactccggacagaactcctggctctcgtaccac
ctgctcagggccaccgagcccggcctgttcagcgtgggtgtgcagagcggcgaggtgcgt
ctcaagaggccggtgacagagagggacagcgtgaagcacaagctccttgtcctggtccgg
gacaacggcaagcccccgctgtcagccacggcagctctgagcgcgctcctgctcaaggac
ttctccgacgtgcgcctcccgcacagcagcccgcccgcagacgagcagggcgactccctg
accacctatttaatcatttccttggtctttgtctcgctcctcttcctcatctcctccgcg
ctctttgtggctcgcaaggtgtgcaagagcaaggagctgaaggctgcccatgtgctttct
ggtgcccacaacttgcagagcggcctggccgatgcagccgctgcagggaccctgccccgc
gcctattgctacgagatcagcctcaccacgggctcgggcaacagcgagttccaattcctc
aagcccatcctgcccagcctgccagcacagcactgcgccacgggccagggcccccaggag
cagcaacaggatttcccctgtgtccctgtcagcacagaggacatggcaccagacaatgct
gggactctctctgcacgacagttcaacgctcttgccttcaattag
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