Oenanthe melanoleuca (Eastern black-eared wheatear): 130258552
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Entry
130258552 CDS
T09236
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oma04515
]
130258552
Cell adhesion molecules [BR:
oma04515
]
Cadherins
Protocadherins
130258552
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
130258552
NCBI-ProteinID:
XP_056358002
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Position
13:18585240..18587690
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AA seq
814 aa
AA seq
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MAIARQVLCLSAFLALPLARAEPIRYSVAEEAESGSLVGKLAEDAGLTPPQLSARRARLL
SEDGRQHLRLDRSSGRLLVAGRLDREELCAHSATCMLPFELLLSDPLQFFRVEVTLNDIN
DHSPVFPEERVTFKILETTEPGSRFPLEEAQDLDIGSNTVQAYSISPKNEHFTVFYGTRN
TGKKYLELVLEKALDREEQAEMGFSLIAVDGGSPPRSGTTEIGVFVLDVNDNAPIFTQDE
YIGKVLENTPEGSLVLTVLATDQDAGVNGDISYQITQAVGQRDSAFVIDPRTGEIKLTKP
LDFEESENHEIRVKATDGGGLSAICKVQVEVLDVNDNAPELAVSSFSSPLPENTVPGTVV
ALFTVRDRDSGANGKISCALDDQLFFSLRPAYKNYYELVTVSALDREHTARYVLSVTAAD
AGSPPLTSTHTFTVDISDVNDNAPVFNQTSYTMYVRENNAPTVFVGAVSAADADVGLNAK
VTYSLAPVAAAERPSCSCISVNSENGHVFVLRPLDYERLRQSEVTVSASDAGSPPLRANV
TVRLVVLDENDNAPLVLYPAQDSSPASSELVPVSAEPGYLITKVVAVDADSGQNSWLSYH
LLRATEPGLFSVGVQSGEVRLKRPVTERDSVKHKLLVLVRDNGKPPLSATAALSALLLKD
FSDVRLPHSSPPADEQGDSLTTYLIISLVFVSLLFLISSALFVARKVCKSKELKAAHVLS
GAHNLQSGLADAAAAGTLPRAYCYEISLTTGSGNSEFQFLKPILPSLPAQHCATGQGPQE
QQQDFPRVPVSTEDMAPDNAGTLCARQFNALSFN
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctctgctttcctggcgctgccgctcgctcgc
gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtcggcaag
ctggcggaggacgcggggctgacgccgccgcagctgtcggctcgccgcgcccgcctgctc
tcggaggacggccggcagcatttgcgcttagaccgcagctccggccgcctcctcgtggcg
gggaggctcgaccgggaggagctgtgcgcccactcggccacctgcatgctccccttcgag
ctgctgctctccgaccccctgcagttctttcgggttgaggtgactctgaacgatatcaat
gaccattcgcccgtcttccccgaggaacgagtcacttttaagattctggagacgaccgaa
ccgggctctcgtttcccgctagaggaagctcaggacctcgatattggcagcaacacagtg
caggcgtacagcatttctccaaaaaatgagcactttactgtcttctatgggactcggaat
acaggcaagaagtatcttgaactggtcttagaaaaggcgctagacagagaagagcaggca
gagatgggtttcagtctcattgctgtagatgggggctctcctccaaggagtggcactaca
gaaattggtgttttcgttctagatgtaaatgacaatgctcctatcttcacacaagacgag
tacataggaaaggtactggagaacacaccagaaggttctctggttctgactgtgctggca
acagatcaggatgcaggagttaatggggacatttcctatcaaatcacccaggcagtagga
cagagagactcagcatttgtgattgatcccagaaccggtgaaattaaactcacaaaaccc
ctagactttgaggagtcagagaatcacgaaatccgggtgaaggctacagacggtggggga
ctctcagcaatttgcaaagtgcaggtggaggtgctggatgtgaatgacaatgccccagag
ctggcggtcagctccttcagcagtcccctccccgagaacacagtgcccggcaccgtggtt
gccctgtttacggtcagggaccgcgattctggtgccaacgggaagatctcgtgtgccctg
gacgatcagctcttcttctccctgcggccagcctacaagaattactatgagctggtgaca
gtgagcgcgctggaccgcgagcacacggctcgctacgtgctcagtgtcacagcagcagat
gcgggctcgcctcctctcacaagcacgcacaccttcaccgtggacatctcggacgtcaat
gacaacgcgcccgtcttcaaccagacgtcctacaccatgtacgtgcgggagaacaacgcg
cccacggtgtttgtgggagccgtgagtgctgcagatgctgacgtggggctcaatgccaag
gtgacctattcgctggccccggtggcggcggcagagcggccctcgtgctcctgcatctcg
gtgaactctgagaacggacacgtgtttgtgctgcggcccctggactacgagcgcttgcgg
cagagcgaggtgacggtcagcgcctctgacgcgggctctcctcccctgcgagccaacgtc
accgtgcgcctcgtggtgctggacgagaatgacaatgcaccgctcgtgctctacccggcc
caggacagcagcccagcgtccagcgagctcgtgcccgtgtcggccgagccgggctacctc
atcaccaaagtggtggccgtcgatgccgactccggacagaactcctggctctcgtaccac
ctgctcagggccaccgagcccggcctgttcagcgtgggtgtgcagagcggcgaggtgcgt
ctcaagaggccggtgacagagagggacagcgtgaagcacaagctccttgtcctggtccga
gacaacggcaagcccccgctgtcagccacggcagctctgagcgcgctcctgctcaaggac
ttctccgacgtgcgcctcccgcacagcagcccgcccgcagacgagcagggcgactccctg
accacctatttaatcatttccttggtctttgtctcgctcctcttcctcatctcctcggcg
ctctttgtggctcgcaaggtgtgcaagagcaaggagctgaaggctgcccatgtgctttct
ggtgcccacaacttgcagagcggcctggccgatgcagccgctgcagggaccctgccccgc
gcctattgctacgagatcagcctcaccacgggctcgggcaacagcgagttccaattcctc
aagcccatcctgcccagcctgccagcacagcactgcgccacgggccagggcccccaggaa
cagcaacaggatttcccccgtgtccctgtcagcacagaggacatggcaccagacaatgct
gggactctctgtgcacgacagttcaacgctctttccttcaattag
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