Oenanthe melanoleuca (Eastern black-eared wheatear): 130258582
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Entry
130258582 CDS
T09236
Symbol
PDLIM7
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130258582 (PDLIM7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oma04990
]
130258582 (PDLIM7)
Domain-containing proteins not elsewhere classified [BR:
oma04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
130258582 (PDLIM7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
130258582
NCBI-ProteinID:
XP_056358053
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Position
13:complement(6132384..6149008)
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AA seq
737 aa
AA seq
DB search
MGDMESYKVMLNGPAPWGFRLQGGKDFSMPLSISRLTLGGKAAQAGVGVGDWVLYIDGES
TSAMTHIEAQNRIRACGDRLCLTLSRAQNQLGKPQKVLSLDKQPPQLLESPSTPVCDPVK
LRMLEDIDDSKPHSWTSQSRSFRKLSRLVGANSMEDGEDELVKKPRDARGSSWGTVEQWQ
PPQPLEPPSTPGCDPGKLRMLEDAEDWQPRTGTSQSRSFRKLAQLTGTDGMEDGEDEFIK
KPRDARGSNWGTGPHRQPPQLLEPPGDTVCDPVKLRMLEDIDDSKPHTWTSQSRSFRKLA
RLVGASSMDDGEEEPVKKPRDSHGSSWGTVEQRQPLEPPSTPGCDPGKLRMLEDAEGWQP
RTGTSQSRSFRKLAQLTGTDGMEDGEDEVVKNPRNAHGSSWGTVEQRQPPQPLEPPSTPG
CNPGKLRLIEDAEDWQPRTGTSQSRTFRKLAQLTGTDSSMEDHDDVFVRKPSQVSVPDPS
PGAAMKTEPGLAPRTPSATPSPTSRPPWAVDPSFAERYAPDKTSTVVSKHSQPATPTPMQ
NRSSIVQAAQQAPEGPGRTPLCYKCNKVIRGRYLVALGHYYHPEEFTCCQCRKVLDEGGF
FEEKGSIFCPKCYDTRYAPSCAKCKKKITGEVMHALKMTWHVQCFTCNACKTPIRNRAFY
MEEGQPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCAICQTNLEGKTF
YSKKDKPLCKSHAFSHV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacatggagtcctacaaggtgatgctgaatgggccagcaccctggggcttcagg
ctgcagggagggaaggatttcagcatgccgctctccatctccaggctgactctgggtggg
aaggcggcccaggccggcgtgggagtgggcgactgggtgctgtacatcgacggggagagc
accagtgccatgacacacatcgaggcccagaacaggatccgtgcctgcggggacaggctc
tgcctcaccttgagcagagcccagaaccagctggggaagccacagaaggtgctgagcctt
gacaagcagcccccacagctgctggagtcccccagcacccctgtgtgtgaccctgtgaag
ctgcggatgttagaggacattgacgactcaaagccccacagctggacctcccagtcccgc
tccttccgcaaactgtcccggctggtgggcgccaacagcatggaggatggtgaggacgag
cttgttaaaaagcccagggatgcccgtgggtccagctggggcacagtggagcagtggcag
cccccacagcctctggagccccccagtacccctgggtgtgatcctgggaagttgaggatg
ttagaggatgctgaggattggcagcctcgcaccgggacctcccagtcccgctccttccgc
aaactggcccagctgacgggcacagatggcatggaggatggtgaggatgaatttattaaa
aagcccagggatgcccgtggttccaactggggcacggggccgcatcggcagcccccacag
ctgctggagccccctggtgacactgtgtgtgaccctgtgaagctgcggatgttagaggac
attgacgactcaaagccccacacctggacatcccagtcccgctccttccgcaagctggcg
cggctggtgggcgccagcagcatggatgatggtgaggaagagcccgttaaaaagcccagg
gattcccatgggtccagctggggcacagtggagcagcggcagcctctggagccccccagt
acccctgggtgtgatcctgggaagttgaggatgttagaggatgctgagggctggcagccc
cgcaccgggacctcccagtcccgctccttccgcaaactggcccagctgacgggcacagat
ggcatggaggatggtgaggatgaggttgttaaaaaccccaggaatgcccatgggtccagc
tggggcacagtggagcagcgacagcccccacagcctttggagccccccagcacccccggg
tgcaaccctgggaagctgcgactgatagaggacgctgaggactggcagccccgcactggc
acctcccagtcccgcaccttccgcaaactggcccagctgacgggcacagacagcagcatg
gaggatcatgatgatgtgtttgttaggaaacccagccaggtctccgtgccggacccatcc
ccgggagcagcgatgaagactgagccaggactggcccccaggacccccagtgccaccccc
agccccaccagccgcccgccctgggctgtggacccctcgtttgccgagcgctacgccccg
gacaagacgagcacggtggtgagcaagcacagccagcctgccacgcccacccccatgcag
aaccgcagctccatcgtgcaggcagcccagcaagcccccgaggggcccggccgcacccct
ctgtgctacaagtgcaacaaggtcatcaggggacggtacctcgtggcgctgggacattat
taccaccccgaggagttcacctgctgccagtgcaggaaggtgctggatgagggcggcttc
tttgaggagaaaggttccatcttctgccccaagtgctacgacacgcgctacgcacccagc
tgtgccaagtgcaagaagaagatcactggggaggtgatgcacgcactgaagatgacctgg
cacgtgcagtgcttcacctgcaacgcctgcaaaactcccatccgcaaccgagccttctac
atggaggaaggacagccctactgcgagagagactatgagaagatgtttggcaccaagtgt
cgtggctgtgacttcaagattgatgctggggaccggttcctggaggcgctggggttcagc
tggcatgacacttgcttcgtctgtgcgatctgccagaccaatttggaagggaagacattc
tactccaagaaggacaagccactgtgcaagagccacgctttctcccacgtgtga
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