Oenanthe melanoleuca (Eastern black-eared wheatear): 130258595
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Entry
130258595 CDS
T09236
Symbol
GABRP
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04080
Neuroactive ligand-receptor interaction
oma04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130258595 (GABRP)
04082 Neuroactive ligand signaling
130258595 (GABRP)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oma04040
]
130258595 (GABRP)
Ion channels [BR:
oma04040
]
Ligand-gated channels
GABA-A
130258595 (GABRP)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130258595
NCBI-ProteinID:
XP_056358086
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Position
13:775028..798537
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AA seq
541 aa
AA seq
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MLDNESCLPAGKPTRSSWGSAVGPVLTCNSRGQELQAFILENLKRIPSPCEDQPWLHCTE
TRDRAGTPRQAEQIQKQSPDMFRRCFSFFGLCLFLPTQRSSLGHGSSLHGRGTTSLPGFE
NLTMGYNKYLRPYFGGEPVQIAMSLDIASISSISESDMLCQQVPGHTSQLCCVPQDFTAT
ISLRQRWTDPRLVFHGNRSFTLDSRLLELLWVPDTYIVESKRSFLHDVTVGNRLLRLFSN
GTVLYALRITTTVACNMDLSKYPMDTQTCRLQLESWGYDESDVTFTWLRGNDSVRGMETL
RLSQYRLERYHTLLSRSQQETGSYPRLILQFELRRNILYFILETYMPSTLLVMLSWVSFW
ITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFSFIFGALVEYA
VAHYSSSQKCAAKGPEEGPANELAEEMEEVNITNVLNNSITSYKQKISFTSIEISSDNVN
CSDLTMKSHEKIKCVLRNKMHRIIGYFTIQNPGNVDRYAKLLFPLFFMVINVFYWAYYLY
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgctagataatgagagctgtcttcctgctggcaaaccgaccaggagctcctggggaagc
gccgtgggaccggtgctcacctgtaacagcagaggacaagagcttcaggcatttattttg
gaaaatctgaaaaggatccccagcccctgcgaggaccagccctggctgcactgcacagag
accagagacagagcagggaccccgagacaagcagaacaaatacagaaacaatctccggac
atgtttcgcagatgtttttcttttttcggtctgtgtcttttccttccaacccaaaggagc
tctctgggccatggatccagcctgcatggcaggggcacaacatcgctccctggatttgag
aacctcaccatggggtacaacaaatacctccggccctactttggtggagaacctgtgcaa
attgcaatgagtctggacattgcaagtatttctagcatatctgagagtgacatgctgtgc
cagcaggtgcctggacacacatcccagctctgctgtgtcccccaggatttcacagccacc
atctccctgcggcagcgctggacagaccctcgcctggtcttccatggcaacaggagcttc
acgctggattctcgcctgctggagctgctctgggtgcccgacacctacatcgtggagtcc
aaaaggtccttcctgcacgatgtcaccgtgggcaaccgcctgctcaggctgttctctaat
ggcactgtcctgtatgccttaagaatcactactactgttgcctgtaacatggacctgtca
aaataccctatggacacacaaacgtgccgactgcagctagaaagctggggctacgatgag
agcgatgtcaccttcacctggctgcgggggaacgactcggtgcgcggcatggagacactg
cggctgtcccagtacaggctggagcgctaccacacgctgctctcccggtcccagcaggag
acaggcagttacccacgactgatattacagtttgaactgagaagaaatatcctttacttc
attttggagacctacatgccctccactctgctcgtcatgttgtcctgggtttctttctgg
atcaccctggactcagtgcctgcaagaacctgcattggagttacaacagtgctttctatg
acaactctgatgattggctcacgaagttccctttcaaaaaccaactgtttcattaaggcc
attgatgtttatcttggcatctgcttcagcttcatctttggtgcccttgtggaatatgca
gtggctcactacagctcatcacagaagtgtgcagctaaagggccagaagaggggcctgca
aatgaactggctgaagaaatggaagaagttaacatcaccaacgtcctcaacaattccatc
accagctataaacagaaaatcagcttcacaagcattgagatttccagtgataatgttaac
tgcagtgacttgaccatgaaaagtcatgagaaaatcaagtgtgtcttgagaaacaaaatg
cacaggattattggttatttcacaattcagaaccctggcaatgtggaccgctacgccaaa
ttgctttttcctttgtttttcatggtgatcaatgtgttttattgggcttattatctatat
ttttag
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