Oenanthe melanoleuca (Eastern black-eared wheatear): 130258619
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Entry
130258619 CDS
T09236
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130258619 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oma03400
]
130258619 (UIMC1)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
130258619 (UIMC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Motif
Other DBs
NCBI-GeneID:
130258619
NCBI-ProteinID:
XP_056358134
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Position
13:6264198..6303745
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AA seq
813 aa
AA seq
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MPRRKKPAEGLESRGQDGEEEEEENRNPANAKKKRTFADAFIVISDSDGEQESKEESGLQ
KKRTKQLDRTKFAAKRKIAQMTEEEQFALALQMSEQEAREVNYQEEEEEELLRKAIAESL
SSCQPSDSLSATPQLSVEELDSQGQSQPAENEGSEVLGGLACCPDTPPSDCSSHSQSSRA
DGNGQMDVARSPLVVLRRLSQKIVENSLVSSIIMSPGKGQPVTRSSEKSSSPAKSDSSNM
LPSTLGEDFMSLSPTFGKVASGGSWRLTPRRLFNSPSSSSEAAGHEPKEQLLPSTGDSVG
EAGAGSSAALWKSRSTEQCDSPRRSGGGAGTKHSSQPGHTAKVCASTEQAEQNEGSGSTL
DLCMPTAVEEKHKQEEARNTVHYYWGIPFCPKGVDPNQYTKVILCQLEVYQKSLKQAQRQ
LLHKKEFGNPVVPSSSLSQNELGKGEEISRENGVADGTEDGDTEGQESENITWLHPSKRK
EAESPGHSMEEEKNSTSDDEPTTSYCQPCQVLPAEDVPEDGEPMQIAQSISTMTPLGSKR
SPDIATENSAEEEISICPETQPSPLEAVEEERGELCSDSRDAPMQVGGDEDAGRTVSECS
PTAAGRVSCPMCDHGFPADEIEVHAMYCNGTAPPEPGQDAPVLTRRQREARNKAASGGSS
PPSLDIDKCEKCYLCKSLVPLLQYQRHVDSCLQAARQAQGTRRLRRAKDTGRQERGLLRM
LELSESKSEGADTGTPLTGLGDQQSSPTLSAADGESSADSPISLQHLPFHVSPAKPSISL
EAMDGVVDSGPRMALHAGSQQRPKGCRRRRHKF
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaaggaagaagcctgcagagggcctggagtctcgaggtcaggatggggaggaa
gaggaggaggagaataggaacccagccaatgccaagaagaagcgcacttttgcggatgca
tttattgttatatctgacagcgatggagagcaggagtcaaaggaagagagtggattgcaa
aagaagagaacaaagcagctggatcgaaccaagtttgctgctaaaagaaaaattgcacag
atgactgaagaggaacaatttgcactggccctgcaaatgagtgagcaagaggctagagaa
gtgaactatcaggaagaggaagaggaggagctcttgaggaaggccattgctgagagcctt
agtagttgtcagccctcagactcattgtctgcaactcctcagctgtcagtggaagaactg
gattcacagggccagagccagcctgctgagaacgaaggctctgaggtcctgggaggcctg
gcatgctgccctgacacccctccctctgactgcagctcccactcacagagctccagagct
gatgggaatggacagatggatgtcgcccggagccccttggtagtgttgaggaggttaagc
cagaaaatcgttgaaaactcactagtatccagcataatcatgtctccggggaagggccag
cctgtgacaaggtcaagtgaaaagtcttcctcaccagcaaaaagtgattcgagtaacatg
ttacccagcactctcggagaggacttcatgtctttgagtcccacctttggcaaggtggct
tccggaggctcctggcgactgacacctcggagactgttcaacagcccctccagctcttct
gaggcagcaggccacgaaccaaaagagcaactcctgcccagcactggtgattctgttgga
gaagctggtgctgggagctcagccgcactctggaagagcaggagcacagaacagtgtgac
agccccaggaggagtggtggaggagcaggtaccaaacacagctcacagcctgggcacact
gccaaggtctgtgcttccacagagcaagcagagcagaatgaggggtctggcagtaccctg
gatctttgcatgccgactgcggtggaggagaagcacaaacaggaggaggcaagaaacaca
gtgcactattattggggcatccccttctgccccaaaggggtggaccccaaccagtacacc
aaagtcatcttgtgtcagctggaggtttaccagaagagcctgaagcaggctcagaggcag
ctattgcataagaaagagtttggtaacccggttgtgcccagttcttccttgagccaaaat
gagcttgggaaaggagaagagataagcagggagaatggggtagctgatggtacagaagat
ggagacacagaggggcaggagtctgaaaacatcacctggctccacccttcaaagaggaag
gaggcagagagtccagggcacagcatggaagaagagaagaactccacttctgatgatgaa
ccgactaccagctactgccagccctgccaggtactgcctgcagaggatgtgcctgaagat
ggggaacccatgcaaattgcacagagcatctccacaatgaccccacttggcagtaaaagg
agcccagatattgccacagaaaactctgctgaagaagagatctctatttgcccagagaca
cagccaagcccactggaagctgttgaggaggagagaggagagctctgttcagacagcaga
gatgcacctatgcaggttggtggggatgaagatgctggcaggactgtgtctgagtgcagc
cctacagctgctggccgtgtgtcgtgcccgatgtgtgaccacggcttcccagcggatgag
atcgaggtgcacgccatgtactgcaacggcaccgcgccgccggagcctggccaggacgct
ccagtgctcacccggcgtcagagagaggcaagaaataaagctgctagtggcggaagcagc
ccaccatctttagacattgacaagtgtgagaagtgctacctctgtaagtcactggtgcca
ctgctgcagtatcagaggcacgtggacagctgccttcaggctgctaggcaagctcaggga
accaggaggctgcgaagagccaaggacactggaagacaggagagaggactcctcagaatg
ctggagctctcggagagcaagtctgaaggtgctgacacggggactcccctcactggatta
ggagaccaacagtcctctcccacactctcagctgctgatggagagtcgtcggcagacagc
cccatctcccttcagcaccttcctttccatgtctcccctgcgaaacccagcatctccttg
gaagccatggatggtgtggtggactcggggccgcgcatggctctccatgcgggcagccag
caacggcccaagggctgccgccggagaaggcacaagttctga
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