Oenanthe melanoleuca (Eastern black-eared wheatear): 130259088
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Entry
130259088 CDS
T09236
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oma04121
]
130259088 (RBBP6)
Enzymes [BR:
oma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130259088 (RBBP6)
Ubiquitin system [BR:
oma04121
]
Ubiquitin ligases (E3)
U-box type E3
130259088 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
130259088
NCBI-ProteinID:
XP_056359014
LinkDB
All DBs
Position
14:8647082..8675236
Genome browser
AA seq
1785 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETTFRSRSEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQQQLPP
PPPPPPPPLMRQTITRTLQPLMRPALARQQDPLMIPLASLASRSALSSLGPGPSMAAGLP
VNPSSVVVSDLPPAVSLSLRGEKPDGPFRDADAVLPPLMAAAELSKSSPLSISSLLEEKG
YQVPVLRQPAIPSLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQAPSL
PASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPAPA
NMSSAWVPTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKEL
MEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSR
SPPYQRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRAVPQGE
AEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQP
RPPLNRENFSPERFGPPGTRRENSPYARGRREEYPAGQSHRNRNVAGNYPEKPGREGHGI
KDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNVELLEGARKPREPVPAEDAK
TDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKIEKTKRKVEVAAAPK
KDNIAKPAKASQEKADPDREKSPRTEPPVKKVKEELPKTDSVKTSSSQKDEKAVGTPRKA
HPKVTKDHPETRPAKEEKAKKEHPKEAKAEKPSSKEDKSKKPAEKSKLSDAKLEKRKRKA
EEKADKEHEATSAKAYKPETAELKTSPKGKAEPEGEKGERTPEKDKAAFLNNPSKKIKLN
RETGKKIVSAENVPPGKEAVEKPEPSSSKVKAEKAKGKARRKVTAADGASSTLVDYTSTS
STGGSPVRKPEEKTDTKRTVIKTLEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEED
IKTTTQVPPTVGKPTSVIKPVSAKAPNPLKHSEKESEPLEKIQKAAKEASYESTQHDAKS
SKSSVLSEKSKTKDRDHSLSDKDSSEKRKSSAQPEKEHSERAAEQGNGKAVSQSSKDGRS
SEKHDSGRGSAAKDFTPNRDKKSEHDGSREHSSSKRRDEKSESARRKDSPSRIRDSAAAQ
KSKPREERVEPPKKGPAEAKRSSYSPPRERKPPEHKAGHDPKRPAEEHKPPDKNPAKEKE
KEKEKHVPEVKSNKEKEPAGNKAPVKQDSPEVKVEKESVAGQADKGAAKPKAPASSAARL
SSDLTRETDEAAFVPDYNESDSESNVSAKDEEAAGKTPKEAKEKAVEKAKEEAAAPAPAE
QPEVGRSQSQSSPSVSRSRSHSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKHKK
HKKHKKHMGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcattacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctgcacatctccctgagcgacctcaagcgccagatcatgggccgggagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagaatacaccgatgat
agtgctctgattcccaagaactcatcggtgattgtgaggagaatccccattggaggagtt
aaagctaccagcaaaacttacgttatgactcctaaatcgcacaaaatcctagaaactact
ttcagaagtcgaagtgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgag
gaggataaaataaaagctatgatgacacagtctggccatgaatatgatccagtcaattac
atgaagaaacccgtggggccacctccaccctcatacacctgtttccgctgtggcaaacct
gggcactatataaagaactgtccaacaaatggggacaaaaatttcgagtctgttcccaga
attaaaaaaagcacaggaattccaagaagttttatgatggaggtgaaggaccccaacaca
aagggtgccatgctgaccaacactgggaaatatgcaattccaaccatagatgcggaagct
tatgctataggaaagaaggagaagcctcccttcctacctgaggagccatcctcctcctca
gaagaagatgatcctattccagatgagctgttgtgtctcatttgtaaggatataatgacg
gatgcggttgttattccctgctgtggaaacagttactgtgatgaatgtattagaacagca
ctgctggagtctgaggagcacacatgccctacctgccatcagacagatgtttctcctgat
gctttaatcgccaacaagtttctgcgccaggctgtcaacaacttcaaaaatgaaaccggt
tacacaaaaaggctccgtaagattcagcagcagcagcagcagcagcagcagctgccccca
ccgccccctcctcctcctcccccgctgatgcggcagacgataacgcgcacgctgcagccg
ctgatgcggccggccctggcgcgccagcaggacccgctgatgatcccgctggcctcgctg
gcctcccgctccgccctctcctccctgggccccgggccgtccatggcagctgggctgccc
gtcaacccctcgtctgtggttgtgtctgacctccctccagcagtgtccctctctctccgt
ggggaaaagcccgatgggccgtttcgtgatgccgatgctgttctgcctcctctgatggct
gctgctgagctttccaaatcttcccctttgtcaatcagcagtttgttggaagagaagggc
tatcaggttcctgtcctgagacaaccagcgataccaagtcttctgggccctcaaggacaa
tcaatacccacaactggtcatccaatgagagctggtgcacttcgcaggccaggctgggaa
ctttcaaatcgaggacgcccgcacagtgaccgtgcccaaaggactcaggccccatcactg
ccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtatcctccaccaccc
catgctcttcctcttcctccgggggtaccaccaccacagtttcctcctcagtttccacct
gggcagcctccatccgctgggtacactgtcccccctcccggatatcccccagctcctgca
aacatgtcatcagcttgggtcccaacagcagtgccagcggctcattcaaacaccatccca
acgacacaagcacctcctctctctagggaggagttttacagagagcaacggaggcttaaa
gaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaaggaattg
atggaatataaaaagattcaaaaggagcgtaggcgttcgttttccaggtccaagtctccc
tatagcgcttcatcttactctagaagctcgtacacctactccaagtctcgctcaggttcg
tcgcgctcccgctcctactcgcgctcctttagccgctcccattcccgctcctactcgcgc
tcgccgccgtaccagagacgaggcaaaggcaagagccgcaactaccgctcccgctcgcgc
tcgcacggctaccaccgctcccgctcccgctcgcccccgtaccggcgctaccactcccgc
tccaggtcccccgtcttccggggccagtcccccaccaagcgcgcggtcccgcagggcgag
gccgagcgcgagtacttcaaccgctaccgagaggtgcccccgtacgacatgaaggcttac
tatggccgctcggtggacttcagagacccttttgagaaggagagatacagagagtgggag
aggaactacagagagtggtacgagaagttttacaagggctatgccgtgggcgctcagccg
cggcctccgttgaacagagagaacttctctccagaaaggtttggcccacctgggaccaga
cgagagaattcaccctatgctcggggacggagggaggagtaccctgctgggcagagccac
aggaatcgtaatgtagctggaaactaccctgaaaagcctgggagagagggccatggcatc
aaagatcctacaaaatcaaaagagaaggaggtagaaaatccactgggagatggcaaaggc
aataaacataaaaaacatcggaagaggagaaaaggggatgagaatgaaggatttccaaat
gttgagctgttagaaggggcaaggaaaccaagagagccagttccagcagaagatgctaaa
acagactctctattcatgctgccaagcagggatgatgccacccctgtaagggatgagccc
atggaagcagattccattgctttcaaaccagtgtctgaaaaggagaaaaaagagaaggat
aagccaaaagcaaagattgagaaaacaaagcggaaagtggaagtggcagctgctccgaaa
aaagacaacatagcaaaaccagctaaagcttcccaggaaaaggctgaccccgatcgtgaa
aaatctcctcgaacggagcctcctgtgaaaaaagtcaaggaagagctgccaaagacagat
agtgttaaaacctcttcatctcagaaggatgagaaggctgttggtacaccacggaaggct
catcccaaggtgacaaaggatcacccagaaaccagaccagccaaggaggagaaggcaaag
aaagagcatcctaaagaagccaaggcagagaaaccctccagcaaggaggataagtcaaaa
aaacctgctgagaaaagcaaactttctgatgccaaacttgagaaaaggaaaagaaaagca
gaggaaaaggctgataaagaacacgaagccacttctgcaaaggcctataaacctgaaacc
gcagaattgaaaacatcgcccaagggcaaggctgagcctgagggagagaagggagagcgc
acaccagaaaaggataaagctgcttttcttaacaacccgtccaaaaagattaaactgaac
cgagaaactggaaaaaagattgtgagtgcagaaaacgtgccacctggaaaagaggctgtg
gagaaacctgagcccagcagcagcaaagttaaagcggaaaaggcaaagggaaaagcaagg
aggaaagtgacagcagctgatggtgccagctcaactcttgtggattacaccagcacgagc
tccactgggggaagccctgtcaggaagcctgaggagaagacagacaccaaacgaactgtc
attaagaccctggaggaatataacaacgacataacagcccctgctgaggatgtcattatc
atgatccaggtccctcagtccaaatgggataaagatgactttgagtctgaagaggaagac
atcaaaaccaccacccaggtgcccccaactgtaggaaaacccaccagtgttatcaaacct
gtgagtgcaaaggcaccaaaccccctcaaacactcggaaaaggagtcagagcctctggag
aaaatacagaaagctgcaaaagaggcgagttatgaaagtacccaacacgatgccaagagt
tcgaaaagttctgtgttgagtgaaaaaagtaaaaccaaagaccgggatcattctttgtca
gacaaggacagttctgagaagaggaagagcagtgctcagccagaaaaagagcactcagaa
cgtgcagctgaacaaggaaatggaaaagctgtctctcaatcttccaaagatggcagatct
tcagagaagcatgatagtggccgtggctccgctgcgaaggacttcactcccaaccgagac
aagaagtctgagcacgatggcagcagggaacattcgagctccaagcgcagggacgagaag
agcgagtcagcgcggaggaaagactccccatcccggatcagggactccgcagcagcgcag
aagagcaaacccagagaggagcgtgtggagccgcccaagaagggccctgcagaggccaag
cgcagcagctacagccccccccgggagcgcaaaccccccgagcacaaagctgggcacgac
cccaagcgccccgcggaggaacacaaacctccggataaaaacccggccaaggagaaggag
aaagagaaggagaagcacgtaccagaagtcaagagcaataaggagaaagagccagctggg
aataaagcaccagtgaagcaggactcgccagaagtgaaggtggagaaggagagcgtggcg
ggtcaggccgataagggcgcggcgaagcccaaggcgccggcgagcagcgccgcgcgcctc
tcgtccgacctcacccgcgagaccgacgaggccgccttcgtgcccgactacaacgagagc
gacagcgagagcaacgtgtctgccaaggacgaggaggccgcagggaaaacgcccaaagaa
gccaaggaaaaggctgtggagaaggcgaaggaggaggcggcggccccggctcccgccgag
cagcccgaggtgggcaggagccagagccagagcagccccagcgtcagccgcagccgcagc
cacagcccctccgagagccagacacggagccacagcagcagtgccagctcaggggagagc
caggacagcaagaaaaagaaaaagaagaaagagaagaagaagcacaagaagcacaagaaa
cacaagaagcataagaaacatatgggaaatgaaacagaattggaaaagagccaaaaacac
aaacacaagaagaaaaaatcgaagaagagcaaagataaagagaaagatgaccaaaaagtg
aaatctgtcacgacataa
DBGET
integrated database retrieval system
