Oenanthe melanoleuca (Eastern black-eared wheatear): 130259096
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Entry
130259096 CDS
T09236
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130259096 (RAI1)
Transcription factors [BR:
oma03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
130259096 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
130259096
NCBI-ProteinID:
XP_056359035
LinkDB
All DBs
Position
14:6880223..6954165
Genome browser
AA seq
1917 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYTVQENSPYPARYSGDESLQAWGGQPQALPG
GVAKYEDNLMKKTVALAGGRPYHEPAATSLPFRTHFQQQPQQQQQQQQQQQQQQPPALPY
PKLQRQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQP
PLERPLGSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPQPPQPPQPPQPPQ
PMQGRHHASETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSV
GRSPSYSSTPSPLMPNLENFQYSQQPLSAGAFPAGIADHSHFMPLLNPSPTDGTSPDTQS
GNCKNLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKTAVPQKKGIKTPART
PEQLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLYCN
QNRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHATLPLETFTKYVSNERDC
PRLLLSALSQEELASEIIVLQDAINEKADKAWANLPMLGKETTKSSFQLENHRPSLDSMV
KGAWPSQGDSSTLTEPLKLDKASGASTGKDFSEEVYEGPQVEFAATESKDVLKDTAPLAF
NSKPSIPAATSSAGATGYSCYSNTTANSVASENAMEHFEWPEESLGEACLRWKDLQATDL
PKGLFPSKLVSSCKEKKNACSLELCDGEEPAKSEPIQDFGQQVMEEEEETLTYDEATKAD
SERWLQDTRHCCSAGDFSEIPIISSPDLKESDLEAEEYSSLCELAGSEQKSVTYDASPPK
PSEMPAVLSSSEVPVSAEETVSTVEKESSASTPRLSGQSVILLGPAVGTETKVKSWFKSS
LPHIQPEEENGGGETSHLEAADAESASTVMVKQQLMPENVLGKMEPVSRGKSLRNKRVHC
RLPEGDGPGSTVLSPFNELPAASSVAGASLGPDGQTEVPSKSTQSQTPRFPAEGLPARMC
TRSFTALAEPRAPAPLEGLKAPAHQEKLGKKPGCGVKQRVAFKTRKRNSRPAPRVVQNAS
DATLLVPSLVAAEEVAGPTPLEVDAVESGERDQRSMILRSRTKTQEVFYTKRQRGKRAAD
VRLKNCKAPKKLISNNHLPPAFKLSAPGSPHKEGKVGARMKLPKAGPGVGGKMSERPLHS
LKRKSTFISPIPTKKRNLVLRSNSGGVKEEKPEGPPSLFKKMPVAKKVKSKLPPKNSGEA
ILKPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFTCK
PAATAVAATVAAYGSSLSPAGAERERVVKHGGVAVAVGDARLPKLAAAQKLPTIPVAEPL
CRNPNGRAPKGKPGGGKKLPHEGCQGEACGSTPGTQSSPNMVAKNLGLLPKKRNRKGKAA
ALGMAKAPLSPALPPPLPRERVAGPGGAEEAPREKKPKTEEKEAGSSDGAPEGRSAAGSA
RGPKARANHSNYNGYSKRQRKRLGHGKAKAVPARCKSRGKRRRQPQQAPLLHPAEPEIRL
KYISCKRLRADSRAPPFAPYVRVERRGEFSTTCTVVNTPGDEARLQRGPAGPAPRPRAAL
PASSTMHLGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKAR
AEGPGEDSTAPERAARGAEGGCGKAARPEAAAEAAKQSALRSSPRGMFRRLQSCYCCDER
TEGEEAAEKPRRHECHKAESPPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEAVK
AAADLKCSSCQQAGATVGCCQKGCPHTYHYACAIDTGCLLTEESFSLRCPKHKRQPV
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcagctgccgtacgcaggc
tatgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcagggcagcag
ctgcagggcaggccggccttttccaattacaccgtgcaggagaacagcccttatccggcc
cggtattccggggacgagagcctgcaggcctggggtggccagccacaggcactgcccggc
ggtgtggccaagtatgaggacaacctgatgaagaagacagtggcgctggcgggtgggcgg
ccgtaccatgagccagcggccacctcgctgcccttccggactcacttccagcagcagcca
caacagcagcagcagcagcagcaacagcagcagcagcagcagccgcccgcactcccctac
cccaagctgcagaggcagaaactgcccaacgatgtctcctcacccatgcccttctcacag
agccctcatttcgggcagcactcccagtccttccctgcctcctccacctactcctcagtg
ccggggggcagccagccggcacactcctacaagagctgcacagcgccctcggggcagccg
ccgctggagcggcccctgggcagcgctgccagcctggcccctggcccccgtgtgcccaac
ctgcacggctaccagcccaaccgcattggctacgagcagcccccgcagccgccaccgcag
cccccgcagccaccaccaccgcagcccccacagccaccgcagcccccacagcccccgcag
cccatgcaggggcggcatcacgcctcagagaccctccactaccaaaacctggccaagtac
caacattacaaccagccaggccagacctactgccagggtgacgcgccgcccgtccggaca
ccggagcagtactaccagaccttcagccccagcgccagccactcaccggctcgctccgtc
ggcaggtccccgtcctacagctccactccctcccctctgatgcccaacctggagaacttc
caatacagccagcagccgctgagtgccggtgccttcccggcgggcattgctgaccacagc
catttcatgccgctgctgaacccttctcccactgacgggacgagccccgacactcaatct
gggaactgcaaaaacttgcagaaggagaagctgcctgaaaacctgctgtcagacctgagc
ctgcagagcctgacagcactcacctcccaggtggagaacatctccaacactgtccagcag
ctgctgctctccaagacggctgtgccccagaaaaagggcatcaagaccccagcgaggacc
cccgagcagctcaaggggcagcactgcagtcctgagagcagcacctactctgcagagcag
gtggggacccccctgtctgacccactgagcaccccccagtctgtccacgctgagacacag
gacactgactatctcagtgggtcagaggaccagctagagaggagtttcctgtattgcaac
cagaaccgcagccctgcccgtgtcaacagcaactccaaggcaaagcctgagtcagtgtcc
acctgctctgtgacctccccagatgacatgtctaccaaatcagatgactccttccagagt
atccatgccaccctgcccctggagaccttcaccaagtatgtgagcaatgaacgggactgt
ccccgactgctcctcagcgccctgtcccaggaggagctggcttctgagatcatcgtccta
caggatgccatcaacgagaaggcagacaaagcctgggccaacttgcccatgctgggcaag
gagaccaccaagtcctccttccagctggagaaccaccggcccagcctggactccatggtg
aagggtgcctggcccagccagggtgactccagcacgctcactgagcccctcaagctggac
aaagcttcaggggccagcacagggaaggactttagtgaggaggtgtatgagggtccccag
gtggagtttgcagccacagaaagcaaggatgtgctcaaggacactgctccactggccttc
aactccaagcccagcatccccgcagcgacgtcaagtgcgggagccactggctacagctgc
tactcaaacaccaccgccaactcggtggcgtctgagaatgccatggagcattttgagtgg
ccagaggagagcctgggtgaggcctgcctgcggtggaaggatctccaagccactgacctc
cccaagggcttgttccccagcaaattggtgagctcctgcaaggagaaaaaaaacgcctgc
agcttggagctgtgtgatggagaggagccagccaagagcgagccgatccaggactttggc
cagcaggtgatggaggaggaggaggagacattgacctacgatgaagcaacaaaggcagac
agcgagaggtggctgcaggacacccggcactgctgctcagctggggactttagtgagatc
ccaatcatctcctcgccagatctgaaggagtcagacttggaggcagaggagtattcctca
ctctgtgagctggctggctcggagcagaagtcagtgacgtacgatgcctcaccacccaag
ccctcggagatgccagctgtgctgtcctccagcgaggtgcctgtgtctgccgaggagacc
gtcagcacagtggagaaggagagctcagcttccaccccacgcctctctggccagtctgtc
atcctgctgggccctgctgtgggcacagagaccaaggtgaagagctggttcaaatcctcc
ctgccccacatccagcctgaagaggagaatggcggaggggagacgtctcacctggaggca
gccgatgctgaatctgcctcaacggtcatggtgaagcagcaactgatgcctgaaaatgtg
ctggggaagatggagcctgtctcacggggcaagagcctccgcaacaagagggtccactgc
cggctgccggagggggatggccccggcagcaccgtgctgagtccattcaatgagctgcca
gcagccagcagtgtggccggtgcctccctagggccagacggacagacggaggtaccgagc
aagagcacccagagccaaacaccccggtttccagccgaaggtctgccagcacgcatgtgc
acccgctccttcaccgccctggccgagccccgcgcccctgccccgctggagggactgaag
gcacccgcgcaccaggagaagctggggaagaagcccggctgtggcgtgaagcagcgagtg
gctttcaaaaccaggaagcgtaacagccggccggcccccagagtggtccaaaatgccagc
gatgccaccctcctggtgcccagcttggtggcagcggaggaggtggcagggccgacaccg
ctggaggtggatgcggtggaatccggggagagggatcagcggtcaatgatcctgcgttcc
cggacaaagacacaggaggtgttctacaccaagcggcagaggggcaagcgggcagctgat
gtccggctgaagaactgcaaggcgcccaaaaagctcatatccaacaaccacctcccacct
gccttcaagctgtcagcaccaggcagcccccacaaggagggcaaggtgggtgccaggatg
aagctgcccaaagcagggccgggcgttgggggcaagatgtcagagcggccactgcactca
ctgaagagaaagtccaccttcatctcccccattcccaccaagaagaggaacctggtcctg
cggagcaacagcggtggtgtgaaggaggagaagccagagggtccccccagcctcttcaag
aagatgccggtggccaagaaggtgaaatccaagctgccccccaagaactctggcgaagcc
atcctgaagccccccctgccaaaggaggcccctgatgtctgcatcaagatcacctcccgg
gcggccttccaggaggccaccaagaccaaagtgctgcctccccgcaagggccgtggcctc
aagctggaggccatcgtccagaagatcacctcacccaacctgaagaagttcacctgcaaa
ccagcggcgacagcggtggcagccacagtagctgcctatggctcctccctgagcccggct
ggggcagagcgggagcgggtggtgaagcacggtggcgtggctgtggctgtgggcgatgcg
cggctgcccaagctggccgcagcacagaagctgcccacgatcccggtggctgagccgctg
tgccggaaccccaatggccgagcaccaaaggggaagccgggtggtgggaagaagctgcct
catgagggctgccagggcgaggcttgtgggtcaacgcctgggacccagtccagcccaaac
atggtggcgaagaacctggggctcctgcccaagaagagaaaccgcaagggcaaagcagca
gcgctgggcatggccaaggcacccctaagccctgcactgccaccaccactaccccgggag
cgtgtagccggcccgggtggtgcggaggaggcgcctcgggagaagaaaccaaagactgag
gagaaggaggcggggagcagcgatggcgcccctgagggacgctccgccgccggatcggcg
cgggggccgaaggcgcgggccaaccactccaactacaacggctactccaaaaggcagcgg
aagcggctgggccacggcaaggccaaggcggtgccggcgcggtgcaagagccgcgggaag
cggcggcggcagccccaacaggccccgctgctgcaccccgccgagcccgagatccgcctc
aagtacatctcctgcaagcggctgcgggcggacagccgcgccccgcccttcgccccctac
gtccgcgtggagcggcgcggagagttcagcaccacctgcaccgtcgtcaacacacccggc
gacgaggcgcggctgcagcggggaccggccgggccggctccgcggccgcgggcggccctg
cccgcctcctccaccatgcacttggggccggtggtgtcgaaggcgctgagcgccgcgtgc
ctggtctgctgcctctgccgcaaccccgccaactacaaggacctgggggacctctgcggg
ccctactaccccgaggactgcctgcccaagaagaaatcgcggctgaaggagaaggcgcgg
gcggaggggccgggcgaggactccaccgcgcccgagcgggcggcccgcggggctgagggc
ggctgcgggaaggcggcgcggcctgaggcggccgccgaggcggccaagcagagcgcgctg
cgctccagcccgcggggcatgttccgtcggctgcagagctgctactgctgtgacgagagg
acagagggcgaggaggcggccgaaaagccccggcggcacgaatgtcacaaggccgagtcc
ccgccgcaggagccggcgggcgacacgcaggagcactggctgcacgaggcctgtgccgta
tggaccgctggggttttcctggtggcggggaagctctatgggctgcaggaggctgtcaag
gcggctgccgacctgaagtgctcgagctgccagcaagcgggagccaccgtgggctgctgc
cagaaggggtgtccccacacctaccactacgcgtgtgccatcgacacaggttgcttatta
actgaggagagcttctctctgagatgtcccaaacataagaggcagccggtgtag
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integrated database retrieval system
