Oenanthe melanoleuca (Eastern black-eared wheatear): 130259178
Help
Entry
130259178 CDS
T09236
Symbol
MGRN1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04120
Ubiquitin mediated proteolysis
oma04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130259178 (MGRN1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130259178 (MGRN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oma04121
]
130259178 (MGRN1)
Enzymes [BR:
oma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130259178 (MGRN1)
Ubiquitin system [BR:
oma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130259178 (MGRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
130259178
NCBI-ProteinID:
XP_056359180
LinkDB
All DBs
Position
14:complement(13503443..13552212)
Genome browser
AA seq
584 aa
AA seq
DB search
MGSLLSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYITPAPHEPVKTLRSLVNIRKDSLRLVRYKDDVDSPTEENGKQKVLYSL
EFTFDADARVAITIYCQATEEFVGGMAVYSTKNPSLQSETVHYKRGVSQQFSLPSFKIDF
SEWKDDELNFDLDRGVFPVVIRAVVDEGDVVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQ
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
NSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSVDHDEHSHPFK
PFKVSSVSLPSRKPRREVRTSSDNIPPGYEPISLLEALNGLRSVSPSLPSAPLYEEISYS
GVLDGLPPASRPLVPMDRALEAAHQKAKRSKSPDSTLRSPSSPIHEEDEEKLSEDSDSQA
VLSGGELVLRETSSPESVAGEEMEEASSVQQGSRPPSVEDVLQDGGCGESRSLTQPDSDP
PVDVFLPGSSDFTKTFPVRGTGSPTQPLLFEQPRLHLEDEQSLS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgggctccctgctcagccggcgcatcgcgggcgtggaggacatcgacatccaggccaat
tcggcctaccgctacccgcccaagtccggaaactactttgcaagtcacttcttcatggga
ggcgagaagtttgacacccctcaccctgagggttacctttttggtgagaacatggactta
aacttccttgggaatagaccagttcagtttccctatataactccagctccacacgagcca
gtgaagacactgaggagtttggtgaacatccgtaaagactccctccgacttgtgaggtat
aaagatgatgttgacagccctactgaggagaatgggaagcagaaggtcctgtacagcctg
gagttcacctttgatgcagatgcccgtgttgccatcaccatctactgccaggctacagag
gagtttgttggtggcatggctgtatacagcacaaagaatccctctctgcagtccgagaca
gttcattacaagagaggggtaagccagcaattctccctgccttccttcaagattgatttc
tcagagtggaaggatgatgagctgaactttgacttggaccgtggcgtgttccctgtggtc
atccgagcagtggtggatgaaggggatgtggtggttgaggtcactggtcatgcccacgtt
ctcctggctgcatttgaaaagcacgttgatggcagtttttccgtgaagccactaaaacag
aagcagatcgttgaccgggtgagctacctgcttcaggagatctatggcatcgagaacaaa
aacaaccaggagaccaagccttcagacgacgagaacagtgacaacagcaacgagtgcgtg
gtgtgcctgtcggacctgcgggacaccctgatcctgccctgccgccacctctgcctctgc
aactcctgcgccgacaccctgcgctaccaggccaacaactgccccatctgccgcctgccc
ttccgtgccctgctgcagatccgggcagtgaggaagaagccgggggctctgtcaccagtg
tcgttcagccccgtcctggcacagagtgtggaccatgatgagcactctcacccctttaaa
ccctttaaggtgagctctgtctctctgcccagcaggaagcctaggagggaagtaagaaca
agctctgacaacatccccccgggctacgagcccatctccctgctggaggcgctgaacggg
ctgcgctcggtgtcgccgtcgctgccctcggcccctctgtacgaggagatcagctactcg
ggggtgctggacgggctgccccccgccagccgcccgctcgtgcccatggacagagccctg
gaggctgcccaccaaaaggccaagcgcagcaagtctccagacagcacactacggtctccc
tcatccccaatccacgaggaggatgaggagaagctctccgaggactctgactcgcaggcg
gtgctgagtgggggtgagctggtcctgagggagaccagctctccagagagcgtggcaggg
gaagagatggaggaagcctcatcagtgcagcaggggagccgcccgccctcggtggaggac
gtgctgcaggacggcggctgcggcgagagccggagcctgacgcagcccgacagcgacccc
ccggtggacgtcttcctgccaggctcgtccgacttcaccaagacgttccctgtccgcggc
accggcagccccacgcagccccttctcttcgagcagccccgtctgcacctggaggacgag
cagagcctgtcgtga
DBGET
integrated database retrieval system
