Oenanthe melanoleuca (Eastern black-eared wheatear): 130259253
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Entry
130259253 CDS
T09236
Symbol
AP5Z1
Name
(RefSeq) AP-5 complex subunit zeta-1
KO
K19025
AP-5 complex subunit zeta-1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
130259253 (AP5Z1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oma03400
]
130259253 (AP5Z1)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
130259253 (AP5Z1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Neil1-DNA_bind
Motif
Other DBs
NCBI-GeneID:
130259253
NCBI-ProteinID:
XP_056359349
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Position
14:5788808..5798748
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AA seq
808 aa
AA seq
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MFTAAAESFLRQAREIQEEELQRYTARVSALLQGPEPGPEAVDGLQRLHLTVAATKYPRK
LDGKFVELLQTVLCSPKSPEQIQLLCAAILREMSPCNDLILSCDEIQDTKLLSLVSSILL
AQENKGEVAAVGQRVVKVLERRLPEGQSARFLLPVLANVISLSPESLTEEQTNVVSKKLA
DWLRYASIQQGMAQPSGGFFSSPRTKQPAPVTEVDGAVATDFFTVLSVAQHYTQDQWLNV
QTFSMLRNWLLCYGGKELNTLNPDDKAGVDRSVTSLVPTTARAGQLLPPRERLRDKAFEY
CQRLAEQSNRRPLKKEDGDLQKACLIEAVKIMDIICKQDSSYVCRAVSFLKILHSRICGD
ATYARALLPIAQFFLNHSKLAAVDSDAIYKHLFTDIPAQLFHNLSLAFEFVQFCKDNSQL
FTDSSSIFRQSFPNLFKFLAWNSPPLISEFVDLLPFLLDPGTAIETFHLLLDLPCLTAAL
DIQLKAAALPASEKAGGDPAGKPATCLEAFRHPLYKGTFQYLLRTKAAPLDAPESLVPLR
QLLGSLAGSPRVVQCAETVPVLLELFFRVVAEFADGSLINQLVVLLLQRSDQLYEIPAFK
EDVYRVLGSQLAVLCGLRPALVVELSTEILEFSGAVSNIQSKEAIFTHMVWAVGEYLSVC
YDKRCTVEQITRFFESLEAVLFEITQLRPQASTPSCAPRAISVLMATLTKLAARSQDLIP
RVSMFLSKMRTFVQSPAVTSVYSEEDLEEILIRATELMNLLKMPSVAQFVFTPPLASTRF
QREVNDSLPLALRMVTQFLEPAPGSMPV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggcggctgccgagagcttcctcaggcaggcgagggagatccaggaggaggag
ctgcagagatacaccgcccgcgtgtccgccctgctgcagggccccgagccgggccccgag
gccgtggacgggctgcagaggctgcacctcaccgtggccgccaccaagtacccccgcaag
ctcgatggcaagtttgtggagctgttgcagacagtgctgtgctcacccaaaagtcctgag
cagattcagctgttatgtgctgccatcctgagagagatgtcaccttgcaatgatcttatc
ctctcctgtgatgagattcaggatacaaagctcttgagcctggtatcctccatccttctg
gctcaggaaaataaaggtgaagtggcagctgtggggcagcgtgttgtgaaagtccttgaa
agaagactgcccgagggtcagagtgctcggttcctccttcctgtcctggcaaatgtcatc
agcctttcaccagaatctctaacagaagaacaaaccaatgttgtcagtaaaaagctggct
gactggctgaggtatgcaagcattcagcaaggaatggctcaaccctctggaggcttcttc
tccagtcccagaaccaaacagcctgctcctgtcacagaggtggatggtgctgttgccaca
gatttcttcacagtgctctcagtggctcagcactacacacaggaccagtggctcaatgtg
cagaccttctccatgctgagaaactggctgctgtgctatgggggcaaggagctgaacacc
cttaatccagatgacaaagcaggagtggacaggtctgtgacatccttggtccccaccaca
gccagggctgggcagctgcttccccccagggagcgtctgcgggacaaagccttcgagtac
tgccagcgcctcgccgagcagagcaaccgccggcccttgaagaaagaggatggagacctg
caaaaagcttgtctcattgaggcagtgaaaatcatggacatcatctgcaaacaggactcc
tcctacgtgtgccgtgctgtctccttcctgaaaatcctgcacagcaggatctgtggggat
gccacttatgccagggcactgctgcctattgcccagttcttcctgaaccacagcaaactg
gcagctgtggactcggatgccatctacaaacacctcttcactgatatcccagctcagctc
ttccacaacctgtcattggccttcgaatttgtccagttctgcaaagacaacagccagctc
ttcacagactcctccagcatattcaggcagagcttcccaaatctcttcaagttcctggcg
tggaacagcccacctctgatctctgagtttgtggaccttctcccatttctgctggatcca
ggcacagccattgagaccttccatttgctgcttgacctgccctgtttgacagcagctctg
gacatccagctgaaggcagctgctcttcctgcctccgagaaggctgggggtgacccagct
gggaaaccagccacgtgtctggaggcctttcgccatcccctctacaagggcacgttccag
tatctcctccgcaccaaggctgctcccctggatgccccggagagtctggttccacttcgg
cagctgctgggatccctggctggcagcccaagggtggtgcagtgtgctgagactgttcct
gtcttattggagctctttttcagggtggtggcagagtttgcagatgggtctctgattaac
cagctggtggtgctgctgctgcagaggagtgaccagctctatgagatcccagcgtttaaa
gaggatgtgtacagggtgctgggctcacagctggcagtgctctgcgggctgcgccctgct
ctcgtggtggagctgtccacggagatcctggagttctcgggagcagtcagcaacatccag
agcaaggaggccatcttcacccacatggtgtgggctgtgggcgagtacctgtcggtgtgc
tacgacaagcgctgcacggtggagcagatcacgcgcttcttcgagagcctggaggccgtg
ctctttgagatcacccagctccggccacaggccagcacccccagctgtgccccccgtgcc
atcagtgtcctcatggccaccttgaccaagctggctgcccgcagccaggacctgatcccc
agagtgtccatgttcctgtccaagatgaggacatttgtgcagagccctgctgtaacctct
gtttactctgaagaagaccttgaggagatccttatacgggcaactgagctcatgaacctg
ctgaaaatgcccagcgtggctcagtttgtgttcacccctcccctggccagcacacggttt
cagagggaggtgaatgactccctccctttggccctgaggatggtcacccagttcctggag
cctgctccaggctccatgccagtgtga
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