Oenanthe melanoleuca (Eastern black-eared wheatear): 130259373
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Entry
130259373 CDS
T09236
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03420
Nucleotide excision repair
oma03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
130259373 (ERCC4)
03460 Fanconi anemia pathway
130259373 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oma03032
]
130259373 (ERCC4)
03400 DNA repair and recombination proteins [BR:
oma03400
]
130259373 (ERCC4)
DNA replication proteins [BR:
oma03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130259373 (ERCC4)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
130259373 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
130259373
NCBI-ProteinID:
XP_056359589
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All DBs
Position
14:9496988..9514339
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AA seq
902 aa
AA seq
DB search
MAALLEHESQIFLELFHRDGLVVCARGLGIDRLLLRFLRLYCEPASLVLVLNTSPAEEEY
FIDQLRSDGVVHLPRRVTNEIANNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMKNLFVGKLY
LWPRFHVAVHSFLEKHKPEVVEIHVAMTPAMLAIQTAILDILNACLRELKRYNPALEVED
LSLENAIAKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKVLRTLLLYLTQYDCVTFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRMADEKLNQKGKGSGSEKRDAKKETEL
KKELVLESNPKWEALREVLKEIENENKSSDNLGGPGQVLICASDDRACAQLREYIITGAE
AFLTRLYNKTFGKDEKAGELWIKDRKAEGNAKPDTGPQAKKAKLTASSKQNKHKKQQDRT
IIQMIGKTEEEKREDVEVEDKPELSGSQEGNTEETIPEDFDVNLPSDCYYGIFKDPLTII
HPLQGCGDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYGGST
EEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLLRDARPASVSADTRKAGG
QEQKGVQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISDLIG
SLNNGRLYAQCVSMCRYYKRPVLLIEFDPNKSFSLIPRGSLQPEISSNDVTSKLTLLTLH
FPKLRILWCPSPHATAELFEELKQNHPQPDAETAMAITADSEILPESDKYNPGPQDFLLK
MPGVNAKNCRALMTHVKSIAELVTLSKDELAKILGNATNATQLFDFIHLTYAEALAKGKS
KR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagagccagatcttcctggagctgttccaccgcgacggg
ctcgtcgtgtgcgcccgcgggctcggcatcgaccgcctgctgctgcgcttcctgcgcctc
tactgcgagcccgccagcctcgtgctcgtgctcaacaccagccccgccgaggaggagtat
tttattgatcagctgaggtcagatggagttgttcatctccctcgacgcgttactaatgaa
attgcaaataatactcgatatgaattttatacacaaggaggagtcatctttgcaacaagt
cggatccttgtggtagatttcctcactgacagaattcctgccaatctcattaccggcatt
ttggtgtacaaagcacacagaatcattgagtcctgtcaggaagcgttcatcttgcgactt
tatcgccagaagaacaagcaaggctttattaaagcttttacagataatgcagttgcattt
aacactggcttttgtcatgtggaaagagtaatgaaaaatctttttgttgggaagctttat
ctgtggccaagatttcatgtagcagtacactcctttttagagaagcataaacctgaagtg
gtggaaatacacgtggcaatgacccctgctatgcttgctatccagactgcaatcctggac
attctgaatgcatgtctgagggaactcaaacgttataacccagctcttgaagtagaagat
ctatctttagagaatgctattgctaaaccttttgacaagacgatacgtcactatttagat
cctctctggcatcagcttggagctaagacaaagtctttggtccaggatttgaaggtccta
cgtactttgctactgtatctaacccagtatgattgtgtcactttccttaatcttctggag
tcactgaaagcaagtgaaaaagcttttggtgagaattcaggctggctgttccttgactcc
agtacttcaatgtttgtgaatgctcgagctcgagtttatcgcatggcagatgagaaactg
aatcagaaaggcaaaggctcaggctctgaaaaacgtgatgcaaagaaggaaactgaactg
aaaaaggaattggttctagaaagtaacccaaaatgggaagctttgagagaagtactgaaa
gagattgaaaatgagaataagagcagtgacaaccttggtggtccagggcaagtgctcatt
tgtgccagtgatgaccgagcctgtgcacagctcagggagtatattattactggagcagaa
gcttttttaacaagactatataacaaaaccttcggaaaggacgagaaagctggagaattg
tggattaaggacagaaaagccgaaggaaatgccaaaccagacacagggcctcaggccaaa
aaagccaaactcacagcttcttcaaaacaaaataaacacaagaagcagcaagaccggact
ataatccaaatgatagggaaaactgaggaggaaaaaagagaggacgtcgaggtggaagac
aaaccagaattaagtggtagccaagaaggcaacactgaagagaccattcctgaagatttt
gatgtgaacttgccctcagattgttactatgggattttcaaggacccactgacgattatc
cacccgctgcagggctgtggggatccctacgcactcactcgggtgctgcatgaagtggaa
cccagatatgttgtgttgtatgatgcagaactcacttttgttcggcagctggaaatctac
aaggcaagcagacctgggaagcctttgagagtttatttcctcatatatgggggctccaca
gaagagcagcgctaccttacagctctgagaaaagagaaggaggccttcgaaaaactcatt
cgagagaaggccagcatggttgttcctgaagaaagagaaggaagagatgaaacaaactta
gacctcctcagagatgctagacctgcctctgtgtctgctgacacacgcaaagcaggcgga
caggaacagaagggtgtccagcaaaccataatcgtggatatgcgggaattccgtagtgag
cttccatcactgatccatcgccgtgggatcgacattgagcctgtgacgttggaagttggg
gattatattctaacccctgacatctgtgtggagcggaagagcatcagcgatctaattggt
tccttgaacaatggcaggctgtacgcacagtgcgtgtccatgtgccgctactacaagcgg
ccagttctcctcattgaatttgatcccaacaaatccttctccttgatccctcgaggctct
ttacagccagaaatttccagtaatgatgttacttctaaactaacccttctcacactgcac
ttcccaaagttacgaatcctgtggtgtccttctccccatgctactgctgaactgtttgaa
gaattgaaacaaaaccatccccaacccgacgcagaaacagcgatggccatcactgcagat
tccgaaattcttcctgagtcagacaagtataaccctgggcctcaggacttcttgctaaaa
atgccaggggttaatgcaaagaactgtcgtgccttaatgacccatgttaaaagcattgca
gagctggtgacactgtccaaggatgagctagccaagattttgggtaatgctaccaatgcc
acacaactcttcgattttattcacctgacctatgcagaggcactagccaaaggaaaaagc
aaaagatga
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