Oenanthe melanoleuca (Eastern black-eared wheatear): 130259389
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Entry
130259389 CDS
T09236
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
130259389 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oma01001
]
130259389 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oma04054
]
130259389 (CIITA)
Enzymes [BR:
oma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130259389 (CIITA)
Protein kinases [BR:
oma01001
]
Serine/threonine kinases: Other
TAF1 family
130259389 (CIITA)
Pattern recognition receptors [BR:
oma04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130259389 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_9
LRR_8
LRR_14
NB-ARC
nSTAND_NTPase5
RsgA_GTPase
NPHP3_N
AAA_19
nSTAND3
nSTAND6
Motif
Other DBs
NCBI-GeneID:
130259389
NCBI-ProteinID:
XP_056359621
LinkDB
All DBs
Position
14:complement(10084392..10112112)
Genome browser
AA seq
1104 aa
AA seq
DB search
MDSVFVPENGYLDLLHSDIDPLHLCTFFDPKSSGDEEGDFSTDLEFDASNYEQVNNVDFP
YENGDGFYPCSNTTDAYAKIAELVEYVLKDQQEKQVEDIFAGNLILDDIAAENTEKFPDI
KMQTCLKRTFLGSAAESYCDASEPKYKKIVEDPAAPAGNGSFFPMHLNSHPVSCTSLTNQ
HMSFSVPASHGLERSLLIPGLSEPLTSECLPVSVKGYQENPGLAGPPQQIFNFVLENGTS
DVIMYPVLTSSMETFISPSFPVNLCDLEKFQEVQDSIIPSEELLKKPGQVETFCSSLKDY
FRDTCKSVTMEQEVNLDHLFIDGTLVQSQSETKTGKNSAKAMEKELVTCSLQEKEKLAID
RSQIFQIPQRKDLETKVIVVLGKAGMGKSILIQKICQDWSNGEFSQFEFVFWFDCKQISL
PEKQYSLKELLLDFFVKPQEGSKEIFEYILQNPDKVLLIFDGFKGLHDHENFPRCSASQP
EKDSCSIKEMLSGLIQKKILNGCTLLFTARPKDKLYQYMSKVDKAIEIVGFSPQQRELYI
TKYFEESSYCDSALKLIKECEYLFSHCYSPVMCRFVCFLCETVLEMGEKSLPSTLTEVFL
KFFHQKIMFMQTDVTTTKNQESLATLARVAWCLGEKHQSAMKSDHFPSEEVKEFALKYGF
FLPFAFPRHSDSEEEEFGSTFSDFVIQNFLCALHLFLAEELKDRNLTKYLSFLSKKKKPY
NWLDLMPRFLAGLVFLQGDPYFWSLSNEDEKQSTKKQKTLLKYIRRLQINTLCPERLLEL
LHCVYETQNNYLLQHVALRLESDLSFLGIVLTPPDVHVLHSILKRSRKEFSLDLRNSSID
IQGLQALVSLKNVISFRASLSDTVGLWKSLEQTKDYELLKASTEKFVLDPFKAKTIKDIS
DLSNLVEMQEKMRNCVQEASGCTSYEIPAIRNLRKLEFALGPACGLQGLLKLVKILAAFP
SLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDLGAENLATALPSLSS
LKTLSLYNNNICDFGAENLAKVLPAMTSLRVIDVQYNKITGVGAQQLTDSLQKCPHIKNL
LMWNPTIPYGVLEHLQQLDSRISV
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggattcagtattcgtgcctgaaaacggctaccttgatttactgcacagtgatattgat
ccattgcatctgtgtactttctttgatcctaaatcatctggagatgaagaaggtgacttc
tctacagatcttgaatttgatgccagcaactatgaacaggtaaataatgtggatttccca
tatgaaaatggagatgggttctacccctgttccaacaccacggatgcttatgctaaaata
gctgaattagtagaatatgtgctcaaggatcagcaggagaagcaggtcgaagacattttt
gcagggaaccttattttggatgacattgctgctgaaaacactgagaaatttcctgacata
aagatgcagacatgtcttaaacgaactttcctagggtctgcagcagagagttactgtgat
gcttcagaacccaaatataagaaaattgtggaagaccctgcagcacctgcagggaatggc
agtttctttcctatgcatctcaacagccacccagtgagctgcacctccctaactaaccag
cacatgtccttttctgttcctgcttcccatgggctggaaagaagcctcctaattcctgga
ttgtcagaacctttgacctcagagtgcctaccagtcagtgtgaaagggtaccaagagaat
ccaggcttggcaggtcctcctcagcagatatttaactttgttcttgaaaatggcacatct
gatgttataatgtatccagtgctgacatcttccatggaaacattcatatctccaagtttt
ccagttaatttatgtgatttagaaaaatttcaagaagttcaagattctataattccttct
gaagaacttttaaaaaaaccagggcaagtggaaactttctgttcatcacttaaggattat
ttccgagacacatgcaaatctgtgaccatggagcaggaagtaaatctggatcacctgttc
attgatggaacacttgttcaaagtcaaagtgaaaccaagactggaaagaatagtgcaaaa
gcaatggaaaaggagctggtaacctgcagcctgcaagagaaagaaaagctagccattgat
agaagccaaatatttcaaatcccacagcgtaaagacttggagactaaagtgattgtggtt
ctgggaaaagcaggaatgggcaaaagcattctcattcagaagatctgccaggactggtcc
aatggagagttttctcagtttgaattcgtattttggtttgactgcaaacaaataagcttg
cctgagaagcaatacagcctgaaggaactgctgcttgatttttttgtaaaacctcaagag
ggaagcaaagagatttttgagtatatattacaaaatcctgataaagtccttctgattttt
gatggttttaaaggattgcatgatcacgagaattttcctcgttgctcagccagccagcct
gaaaaggattcatgcagtataaaggagatgctttcaggactcatccaaaaaaagatactc
aatggctgtactttattattcacagcaagaccaaaagacaaactgtaccagtacatgtcc
aaagtggataaggctattgaaattgtaggattttcccctcagcagagagaattgtacata
accaaatactttgaagaatcatcctactgtgatagtgcactgaaattaatcaaagagtgt
gagtacttgttcagtcattgttacagccctgttatgtgcagatttgtttgttttctctgt
gagacagtgctcgaaatgggagagaaaagtcttccttcaactcttactgaagtcttcctg
aaattttttcaccagaagataatgtttatgcaaacagatgttacaaccacaaaaaatcaa
gagagtcttgctaccctagcccgtgtagcatggtgtcttggagaaaagcaccaaagtgcc
atgaaaagtgatcatttcccttctgaggaggttaaagagtttgctctgaagtatgggttt
ttcctgccatttgcattccccagacattcagatagtgaagaagaggaatttgggagcaca
ttctctgattttgtcattcagaatttcttgtgtgcgcttcacctatttttagcagaagag
ctcaaggatagaaatctaacaaagtacctgtcttttctatccaagaagaaaaaaccttat
aactggttagatttaatgcctcgatttttagctggtttggtgtttctccagggtgacccc
tacttctggtctctttcaaatgaggatgaaaaacaatcaaccaagaaacagaagacactc
ttgaaatatattagaaggctgcagattaatactctctgtccagagagattgctggagctt
ttacattgtgtttatgaaacacagaacaattatcttcttcagcatgtggccttaagactc
gagtcagacttgtcttttctgggcatagttctcacaccacctgatgtccacgtactgcac
tctattttgaaaaggtcaagaaaagagttttccttggatttacgaaacagcagtattgac
atacaagggctgcaagccttggtcagcctaaagaatgtgatatcattcagggcctccctc
agtgacacagtcgggctctggaaatctttagaacagacaaaagactacgaactgctgaaa
gcatccacagagaaatttgttcttgatccctttaaggcaaagacaattaaggacatcagt
gacctctccaaccttgtagagatgcaggagaagatgaggaattgtgtgcaagaagcatct
ggttgcaccagctatgaaattccagccatcaggaacctcagaaaactcgaatttgcgctg
ggtccagcatgtggccttcaaggattgctaaaacttgtgaaaattcttgcagcatttcca
tcacttcagcatttagaccttgatgctctgagtgaaaatggcataggagatgaaggagca
aagagtctatctgaagtctttccaaccctgacatcactggaaacattaaatttatcacag
aataaaataacagatctgggtgcggagaaccttgctacagctctcccttccttgtcttcc
ttaaaaacactaagcttgtacaataacaacatctgtgattttggagcagaaaatctggca
aaggttcttcctgcaatgacatctttaagagtgatagatgttcaatataacaaaataact
ggtgttggagcccagcagctgactgacagcctacaaaaatgtccccatataaagaacttg
ttgatgtggaatcccaccattccctatggagttcttgagcaccttcagcagctggactcc
aggatcagtgtgtag
DBGET
integrated database retrieval system
