Oenanthe melanoleuca (Eastern black-eared wheatear): 130259601
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Entry
130259601 CDS
T09236
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04142
Lysosome
oma04144
Endocytosis
oma05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130259601 (CLTCL1)
04142 Lysosome
130259601 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130259601 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130259601 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oma04147
]
130259601 (CLTCL1)
Membrane trafficking [BR:
oma04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
130259601 (CLTCL1)
Exosome [BR:
oma04147
]
Exosomal proteins
Proteins found in most exosomes
130259601 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
130259601
NCBI-ProteinID:
XP_056360046
LinkDB
All DBs
Position
15:8290115..8322852
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGNYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMEHSLLQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQLCGLHIVIHADELEELISYYQDRGYFEELIGLLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTEEEDFQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDKL
DASESLRKEEEQVNEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaatactgcccattcgcttccaggagcacttccagctccaaaatttgggcatt
aatccagcaaacattggattcagcaccctaacgatggaatctgacaagttcatctgcata
agggagaaagtaggagagcaggcacaagtagtgataattgacatgagtgatccaacaaca
cccatcagacgtccaatttctgcagaaagtgccatcatgaatccagcctctaaagtaata
gcactaaaagctgggaaaacacttcagatctttaacattgagatgaaaagtaaaatgaaa
gcccacacaatggcagaggaagtgatcttctggaaatggatatcggtgaatacagttgcc
ttggtgacagagacagcggtataccactggagcatggagggagaatcacaaccccaaaag
atgtttgatagacatgctagtcttgcaggctgccaaatcatcaattacagaacagatgaa
caccaaaaatggctgctgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctgtactcggttgatagaaaagtctcccaacctatagaaggccatgcagcagct
tttgcagaattcaaaatagagggaaatgccaaaccttctaccctcttctgttttgctgta
aggagtcctgcaggaggcaagctgcacataatcgaagtaggtcagccagctactggaaat
cagccatttgttaagaaagctgttgatgtgtttttcccacctgaggcacaaacagacttt
cctgtggcaatgcagattggaattaagcatggtgttatttatctgatcacaaagtatgga
tatatccacatgtatgatttggagtctggagtgtgcatctacatgaaccgtattagtgct
gatactatctttgtcacagctcctcatgaacctacctcaggcattattggtgtgaacaaa
aaaggacaggtgctttctgtatgtgtagaggaagacaacatagtgaattatgctacgaat
gttctccagaatcctgacttgggactgcgaatggctatacgtagtaatctagctggggca
gaggagttatttgccagaaagtttaacacgctgtttgctcaaggaaactatgctgatgct
gctaaggtagctgcatctgcaccaaagggaattctgcgtaccagtgatacaattaggaag
ttccagagcgtaccagctcagcctgggcaggcctctcccctgctccagtactttggaata
ttgcttgaccaggggcagctgaacaagtttgaatctttggagctctgtcgtcccgtcctg
cagcagggccgcaaacagcttctggagaagtggctgaaggaggacaagctggagtgctca
gaggagctaggagacttggtgaagacggctgatccaacccttgcactcagcgtctacctt
cgggctaatgtgccaaacaaagtgattcagtgcttcgctgaaaccggtcaattccagaaa
atagtgctgtatgctaagaaggttggctataccccagactggatcttcctgctgagaagt
gtgatgagagtcagtccagaacaaggcctgcagttctctcagatgctggtacaggatgag
gagccgctggctaacattaaccagattgtggatgtgtttatggagcacagtcttctgcag
cagtgcacatcctttttgttggatgccctgaaaaacaaccgccctgcagaaggccacctt
caaacccgcctcctggaaatgaatttgattcatgccccacaggttgcagatgccattctc
ggaaaccaaatgtttacacactatgatcgtgctcatgttgcccagctgtgtgaaaaggca
ggcttgctccagcgagctttggaacactacacggatctctatgatattaaacgtgcagtt
gttcatactcacctcttgaatcctgagtggcttgtgaacttctttggctctctctcagtt
gaagactctgtggagtgtttgcgtgctatgttgtcagccaacattaggcaaaacctacag
ctctgtgtgcaagttgcttctaaataccatgaacagcttggcactcagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgtaaac
tttagccaggatccagatgttcacttcaagtacatccaggcagcttgcaagactggtcag
ataaaggaagtggaaagaatctgccgtgaaagtaactgctataatccagaacgagtgaag
aactttctgaaggaggcaaagctcacagatcagcttcctctgatcattgtctgcgatcgg
tttgactttgttcatgacttggtgctctacttatatcgcaataatctgcagaagtatatc
gagatctatgtacagaaggtgaatcctagccgtataccagcagtggttggagggctactt
gatgtagattgttctgaagatgtcatcaagaacttgatcatggtggtgagagggcagttc
tccacagatgagctggtggctgaagtggaaaaaagaaatcggcttaagttattgttgcca
tggcttgaatcaaggattcatgaaggctgtgaagaacctgcgactcacaatgctttggcc
aaaatctacattgacagtaataataatccagagcgcttccttcgtgagaatccttactat
gacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgttgct
tatgagagggggcagtgtgatctggaactcataaaggtgtgcaatgagaactccctgttt
aagagcgaggctcgctatctggtgcgcaggaaggaccctgagctttgggcaaatgtgctg
gaagaaaacaacccattcaggcggcagcttattgaccaggttgtccaaacggctttatca
gagacacaggatccagaggaagtttctgtaactgtgaaagctttcatgactgctgatttg
ccaaatgaactgattgagttattggaaaaaattgtcttggataattctgtattcagtgaa
cataggaatctccagaatctgctgatcctgactgccattaaggctgaccgcacccgagtg
atggaatacatcaatcggctggataactatgatgccccagatattgcaaacattgccatc
agtaatgagctgtatgaggaagcctttgctatattcagaaaatttgatgtcaatacttca
gcaattcaggtgctgattgagcatattggcaacttagaccgtgcttatgaatttgcagag
agatgtaatgaaccagcagtgtggagccaactggccagagctcaactccagaaggatttg
gtgaaggaagccattgactcctatataaaggcagatgatccatctgcctacatggaagtc
gttcaggcagctaatagaaatgataattgggaggacctagtcaagttcttacagatggcc
agaaagaaggctagagagtcttatgtagagacagaacttatttttgctttggcaaaaact
aatcgtctgtcagaactggaggagtttattagtggccctaataatgcccatatacaacag
gtcggtgatcgctgttatgaagaggggatgtatgaagcagcaaagcttctctataacaac
gtatccaactttgctcgcctggcatctaccttggtgcaccttggggagtatcaggcagca
gtggacagtggccgcaaagccaatagcacaaggacttggaaggaggtctgcttcgcctgt
gtggatggaaaagaattccgcttggcacagctctgtggcttacacatagtcatccatgct
gatgaacttgaggagctgatcagttactatcaggatcgtgggtactttgaagaactgatt
ggccttttggaagctgctttgggcttagagcgtgctcatatggggatgtttactgaactt
gccatcttatactccaaattcaagcctcagaaaatgagggagcatctggagcttttctgg
tctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctgtatgacaagtacgaggagtatgacaatgcagtaattactatgatgaat
catcccactgatgcctggaaagaaggccagtttaaagacataattgccaaggtggccaat
gtggagctgtactacaaagccttgcagttctacttagactacaaacctctgctgatcaat
gatctcctgcttgtattatctccacggctagatcacaccaggacagtcaattttttctca
aaggttaatcagctacttctagtaaagccttatctgcgttcagtccagaaccacaacaac
aaaggagttaatgaagctctaaacaaccttttaacagaagaggaagatttccagggtttg
agagcttccattgatgcctatgacaactttgataacataacattggctcagcgtctggaa
aaacatgaactaattgaatttaggcgtattgcagcgtacttgtacaagggtaacaaccgc
tggaaacagagtgtggagctgtgcaagaaagaccgtctgtataaggatgccatgcagtat
gctgcagagtccaaagatgcagagctggctgagaagctgctccagtggttcttggaagaa
ggcaagcaagagtgctttgcagcctgccttttcacatgctatgacttgctgcacccagat
gtagtccttgagctggcatggagacataacatcatggactttgcaatgccttacttcatc
caagtgatgagagagtaccttaccaaagttgatggactgttctataaggtggataaactt
gatgcttctgaaagcctaagaaaagaagaggaacaagtaaatgaacccactccaatagta
tttggccagcagttgatgttaacagcaggccccagtgcagtacctccccaggcaaacttc
ccatatggatacacagcaccaggattcacccagccgcctgtttatggtttcaatatgtaa
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integrated database retrieval system
