KEGG   Oenanthe melanoleuca (Eastern black-eared wheatear): 130259673
Entry
130259673         CDS       T09236                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
oma  Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130259673 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oma03041]
    130259673 (SF3A1)
Spliceosome [BR:oma03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    130259673 (SF3A1)
 Complex B
    130259673 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    130259673 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 130259673
NCBI-ProteinID: XP_056360220
LinkDB
Position
15:complement(12499282..12512029)
AA seq 790 aa
MPAGPVQAVPPAQPAPPAESKPPEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVAR
NGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQS
AQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLT
QLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLLKLKKEAENPKEVLDQV
YYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEE
LGARILIQERYEKFGESEEVEMEVESDEEDEKQEKADEPPAQLDQDTQVQDMDEGSDDED
EGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPAS
KMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETA
IGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKE
KIGPSKPNEIPQPPPPSSASNPPASAQPITSVPRPPTMPPPVRAAVVSAVPVMPRPPMTS
VVRLPPGSVIATPMPPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPS
PAPMPPVHPPPPMEDEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLN
GQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHL
ALKERGGRKK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgcccgccggacccgtgcaggctgtgcctccggcgcagcccgcgccccccgccgagagc
aaaccgccagaagaggagccaaaagaggaagcagcaccagccaagcctgtggtgggaatt
atttaccctcctccagaggtcaggaatattgtggacaagactgccagctttgtagccaga
aatggtccagaatttgaagcccgaattcgtcagaatgaaataaataaccccaagttcaac
ttcttgaaccccaacgacccttaccatgcctactaccggcacaaggtcagcgagttcaag
gagggcaaagcccaggagccctcagctgccatccccaaggtcatgcagcagcagcagagt
gcccagcagcagctcccacagaaggtgcaggcgcaggtgatccaggagaccgtggttccc
aaggagcccccgcccgagttcgagttcatcgcggaccctccgtccatctcggccttcgac
ctggacgtggtgaagctcacggcgcagttcgtggcccgcaacgggaggcagttcctcacc
cagctcatgcagaaggagcagaggaattaccagtttgatttccttcgcccccagcacagc
ctgttcaactacttcaccaagctggtggagcagtacacaaagatcttgatcccaccgaag
ggtttgctcctcaagctcaagaaggaggcagaaaatcccaaggaagtcctggatcaggtc
tattacagagtggagtgggccaagttccaggagcgagagagaaagaaggaagaggaggag
aaggagaaggagcgtgttgcttatgcccagattgactggcacgactttgtggttgtggaa
acagttgacttccagcccaacgagcaagggaatttccctcctcccaccactccagaagag
ctgggagctcgaatcctgatccaggagcgttatgagaagtttggggaaagtgaggaggtg
gagatggaggtggaatcagatgaggaagatgaaaagcaagagaaagcagatgagcctcca
gcccagctggatcaggacacacaagtgcaggatatggatgagggatcagatgatgaagat
gaaggtcagaaggttcctcctcctccagaaactccgatgcctcccccactccctcccaca
ccagatcaggtcattgtgcggaaagattacgatcccaaagcctcaaaaccgttaccgccc
gccccggctccggatgagtacctggtgtctcccatcactggagaaaagattcctgccagt
aaaatgcaggagcacatgaggattgggctcctggatccacggtggctggagcagcgggat
cgatccatccgggagaagcagagtgatgacgaggtctatgccccaggtttggatattgag
agcagcctgaagcagctggctgagcgtcgtactgatatctttggtgtagaagagactgcc
attggtaaaaagattggtgaagaagagatccagaaaccagaggaaaaggtgacctgggat
ggccactcgggcagcatggcccgcacacagcaggctgctcaggccaatatcactctgcaa
gagcaaattgaagccatccacaaggccaaaggactggtgccagaggatgacagcaaggag
aagatcgggcccagcaaacccaatgagataccccagccaccccctccttcctcagcctcc
aacccccctgccagcgcccagcccatcacatctgtacctcggccacccactatgccccct
cccgtccgtgccgccgtggtttccgccgtgcccgtcatgccccgtccccccatgacgtcc
gtggtgcggctgccgccgggctccgtcatcgccacccccatgcctcccatcatccacacc
ccgcgcatcaacgtggtgcccatgcccccctcggcgccccccatcatgagcccccgcccg
ccccccatgatcgtccccacagcctttgtccctgctcctcccgtggctccggtcccgtcc
ccggcgccgatgcctccggttcaccccccgccgcccatggaggatgagcccgtctccaag
aaactgaagagtgaggacagcctgattccagaggaggaattcctgcgcaggaacaagggc
ccggtcacggtcaaagtccaggttcccaacatgcaggacaagacagaatggaagctgaat
ggccaagtgctggtgttcaccctgcccctgtcagaccaggtgtctgttataaaggttaag
atccatgaggccacagggatgccagctgggaagcagaagctgcagtatgagggcatcttc
atcaaggattccaactccctggcttattacaacatgacgagtggctctctgattcacctg
gcactcaaagagagaggaggcaggaagaaatag

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