Oenanthe melanoleuca (Eastern black-eared wheatear): 130259676
Help
Entry
130259676 CDS
T09236
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oma03041
]
130259676 (TFIP11)
Spliceosome [BR:
oma03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130259676 (TFIP11)
Other components
Complex C specific factors
130259676 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
130259676
NCBI-ProteinID:
XP_056360226
LinkDB
All DBs
Position
15:complement(4569540..4580015)
Genome browser
AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGDDGVEMESFEVSDWDLQNEFNPHRQRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVSFVSAGLRKAAAEELSDEDSDDDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFAGGSKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTTQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRISKQLAAPQKEISQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMAEVLSHEEKAI
SNLSKVLDMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKEYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHSGQDLSTDAFHRLMWEIWMPYVR
NIVARWQPRNCGSMVDFLDSWVNVVPVWILDNILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAAGSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcgcacttgtacggcacggacggagacgatggcgtggagatggagagcttc
gaggtgtcggactgggacctgcagaacgaattcaacccgcaccggcagcggcaccgccag
accaaggaggaggcgacctacggcgtgtgggccgagcgcgactcggatgaggagcggccc
agcttcggcgggaagcgctccagggattactctgcccccgtgagctttgtcagtgctggg
ctgaggaaagcagcagccgaggaactctcggatgaggactcagatgatgatgagaagcct
gtgaagcaggaggagattcccaaggagtttgtgcccaagaagttaaaaacaggtggaaat
ttcaagcccagccagaaaggctttgcagggggctccaagtccttcgtggattttggcagc
tgggagagacacactaaaggaattgggcagaagcttctccagaagatgggatatgtccct
ggaaggggtctggggaagaatgctcaaggaatcatcaatcccatcgaggccaagcagagg
aaaggcaaaggtgctgtgggcgcctacggctccgagaggaccacgcagtccttgcaggac
ttccctgtggtggactcagaagaggaagctgaggaggaatttcagaaggagctcagccag
tggcggaaagacccaaatggaggcaagaaaaaacccaagtacagctacaagacagtggaa
gagctgaaagccaagggcaggatcagcaagcagcttgcagcccctcagaaggagatttcc
caggtcaaggtgatcgacatgacgggccgggagcagaaggtttattacagctacagccag
atcagccacaagcacaacatcccagatgacagcccccagcagcccctgggcaaggactcc
aagccccaggggtttgccctgcctgagctggagcacaacctgcagctgctcatcgacatc
acagagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtggtc
aacctgagccacgagatccagaagatggctgaggtgctgtcccacgaggagaaggccatc
agcaacctcagcaaggtgctggacatggtggaggagtgtgagagaaggatgcagccaggc
tgtgagaaccctctgaccctggatgagtgtgcaaagatctttgagaccctgcaggacaag
tactatgaggagtacaggatgtcagacagggtggacctggcagtggccatagtttatcct
ctcatgaaggaatacttcaagaactgggatcccctcaaggactgtacatatggcacagag
atcatagccaagtggaagagccttctggaaaatgatcagctgttatcccacagtgggcag
gacctgtcaacagatgcttttcacagactgatgtgggagatctggatgccatatgtcaga
aacatcgtggcgcggtggcagccaaggaactgcggatccatggtggatttcctggacagc
tgggtgaacgttgttcctgtgtggatactggataacattctggatcagctcatcttcccc
aagctgcagaaggaggtggagagctggaacccactgacggacacggtgcccatccactcg
tggatccacccctggctgccgctgatgcaggcgcggctggagccgctctactcgcccatc
cgcaacaagctggccaacgccctgcagaagtggcaccccagcgactcctctgccaagctc
atcctccagccctggaaggatgtcttcactcctggctcctgggaggctttcatggtcaag
aacatcgtgcctaaactcggtatgtgtctgaatgaactcatcatcaacccccaccagcag
cacatggatgccttttactgggtgattgactgggaggggatgatttctgtctccagcctg
gttgggctgctggagaaacacttcttcccaaagtggctgcaggtgctctgctcttggctc
agtaacagccccaactacgaagagatcaccaagtggtacctgggctggaagtccatgttc
tcagaccaggtgctggcacatccctccatcaaagacaagttcaatgaagcccttgacatc
atgaacagggctgtgtcctccagcgtgggtgggtacatgcagccgggcgcccgggagaac
atcgcctacctgacgcacacggagcggcgcaaggacttccagtacgaggccatgcaggag
cggcgcgaggccgagaacatggcgcagcgcggcatcggcgccgccgccggctccgtgccc
atgaacttcaaggacctcatccagaccaaggccgaggagcacaacatcgtcttcatgccc
gtcatcggcaagaggcacgagggcaagcagctctacaccttcggcaggatcgtcatctac
atcgacaggggcgtggtcttcgtgcaaggggagaagacctgggtgcccacctcgctgcag
agcctcattgacatggccaagtga
DBGET
integrated database retrieval system
