Oenanthe melanoleuca (Eastern black-eared wheatear): 130259818
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Entry
130259818 CDS
T09236
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03030
DNA replication
oma03410
Base excision repair
oma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130259818 (POLE)
03410 Base excision repair
130259818 (POLE)
03420 Nucleotide excision repair
130259818 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oma03032
]
130259818 (POLE)
03400 DNA repair and recombination proteins [BR:
oma03400
]
130259818 (POLE)
Enzymes [BR:
oma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130259818 (POLE)
DNA replication proteins [BR:
oma03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
130259818 (POLE)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
130259818 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
130259818
NCBI-ProteinID:
XP_056360507
LinkDB
All DBs
Position
15:13310929..13340870
Genome browser
AA seq
2295 aa
AA seq
DB search
MGLRDGAEPEAARRGWRPGGHRELADGAGSGRDDGPALSAVKRLERAQRTDRLDALFGFE
RPAEPGERTGWLINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYQPYFYIATQKG
CEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKDIS
PAVRKNREQDQASDVYTTMLSSALSGGSLSTDEEGASKKIANQMDNIVDMREYDVPYHVR
LSIDLKIHVAHWYNVRYRGSTFPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDADTD
QIMMISYMIDGQGYLITNREIVSENIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHI
QETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWV
KRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYM
KYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDG
HVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLVQHVEKTLQHAIEEEEGLPLD
QVTNFQEVCDEIKAKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATC
AACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGAPRAFHELS
REEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGL
HKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEM
AGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVTIS
YPGAMLNILVKEGFTNDQYQELQDPASLTYTTRSENSIFFEVDGPYLAMILPASKEEGKK
LKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVAD
YWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKD
AGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWD
YYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFVSEG
KKQVLASRPVEGAPSSQVGDIEDFGAVKIPQPLVPIANKRKRIPAAEESQQLSQDLELSQ
SWREILGPPPPLGTTKEEHLVWLRFQQKKWELQARQRKERRKRRRLEDDGGGAGGGAVRD
ALSKGLGSYLRQRARSILDLPWQLVQIAETGQPGLFRLWAVIGSDLHCIKLIPRVFYVNQ
RIPKPEEGTAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHVNEINADLSAPDIEGVYETQ
VPLLFRALVRLGCVCMVSRQLVRHLAGREADTFSIEHLEMRSLAQFTYLEPGSIRHIYLY
HSCQGSKALLGLFIPSQRKAAVFVLDKVRSNQMPNLTTLFSVERAALLGKVGEELLPPDK
HTFEVRAETDPKAIYRGVQRLLLGYKDERRGPTLVAVQSNWDLKRLASGIPSIEEFPLVP
IRLADDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGSD
LFFSRHLCRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLELD
IQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCSN
AFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFL
QLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRC
WEFLLWMDPANYGGIRGKVDSRIHYGEKDTSKRQALEEESEEEEEEEVAREEEEEEGDPD
VEELLENSWNIAQFLPQAGSCQSYFLMIVSAYIVAVYHSMKGELRRNTPGSTPIKRRSTS
QVSQEALGELRAMPGMITFSQDYVANELTQSFFTITQKIQKKMAGSRNATEPSDMFPVLP
GSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSY
VLPEVICRNCNFCRDLDLCKDPSLSQDRLVLPGWQCPNCHVQYDIDAIEMALVEALQKKL
MAFVLQDLVCKKCRAVKEAHMPVYCSCAGDFTLTISSQAFMDHVSVFQNIARHYGMAYLL
ETIEWMLHTNLQLQQ
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcgggacggcgctgagcccgaggcggcgcgtcgggggtggcggccgggcggg
caccgggagctggctgacggcgccgggtccggccgtgacgatggccccgcgctgtctgca
gtcaagcgcctggagcgggcgcagcgcacggaccggctggacgcgctgttcggcttcgag
cggcccgcggagcccggtgagcggacgggctggctcatcaacatgcacccgacggaggtg
ctggatgaggaccggcggtcagtgagtgcagtggactactacttcatccaggaggatgga
agccgcttcaaggtggccctaccctaccagccctacttctacattgccacccagaagggc
tgtgagcgggaagtgtcttccttcctctccaagaagttccaagggaagattgcgaagctg
gaaactgtccccaaagaggacttggacctgccaaaccacttggtgggcctgaagaggaac
tacatcaagctgtccttcaacacagtggaggacttggtgaaggtgcggaaggatatctct
cctgctgtgaggaaaaacagggagcaggaccaggccagtgatgtctacacgaccatgctg
tcgagtgctctgagtgggggcagtctaagcacagatgaggaaggagcctccaaaaaaatt
gccaatcagatggacaacattgtggatatgcgggagtatgatgtgccctaccatgttcgc
ctttccatcgacctgaagatccatgtggctcactggtacaacgtgcggtaccggggcagc
accttcccccccgagatcacgcgccgggatgacctcgtggagcggccggatcctgttgtt
cttgcctttgatattgaaacaaccaaactccctttgaagtttcctgatgcagacacagac
cagatcatgatgatctcctacatgattgatggacagggctacctgatcacaaacagggag
attgtctcagagaacattgaagactttgagtttactcccaagccagagtatgagggtcca
ttttgtgtctttaatgaaccagatgaggctcatttaatccagagatggtttgaacacatc
caggagaccaaacccaccatcattgtcacatacaatggagacttctttgactggcccttt
gtggaagcaagagctgcagctcatggaattaatatgtatcaggaaattgggtttcagaag
gacagccagggagagtacaaagcatcccagtgcatccacatggactgtctgaggtgggtg
aagagagacagttacctcccagtgggaagtcacaacctgaaagcagcagctaaagcaaaa
ctgggttatgatccagtggagctggaccctgaggagatgtgccggatggccacggaggag
cctcagaccctggccacctactcagtgtccgatgccgttgctacttactacatgtatatg
aaatatgtgcatcccttcatttttgccttgtgtaccatcattcccatggagcctgatgag
gtgttaagaaaaggatctgggacactgtgcgaggcactgctgatggttcaggcctaccat
gccaacatcatcttccccaacaagcaggagcaagaattcaacaaacttaccgaagatgga
cacgtgctggactctgagacctacgtgggaggccacgtggaagccctggagtctggggtg
ttccgcagtgacattccctgccgcttcagaatgaatcctgctgccttcgacttcctggtg
cagcacgtggagaagaccctgcagcacgccatcgaggaagaggagggtctgcccttggat
caggtcaccaacttccaggaggtttgtgatgaaatcaaggccaaactgaattccctgaag
gatgttcccaacagaattgagtgtcctcttatctatcatctggatgtgggggccatgtac
cccaacatcattttgaccaacaggttgcagccctcggccatggtggatgaggccacatgc
gctgcctgtgacttcaacaagccaggtgccaactgtcagcgccggatgacgtggcagtgg
agaggagaattcatgcctgccagccgcagcgagtatcaccgcatccagcagcagctggag
tcggagaagttccctcccttgttccctgatggagcaccccgtgccttccatgagctctcc
cgggaggagcaagccaagtatgagaaaaagcgcctggcagattactgccgcaaggcgtac
aagaagatccacgtcaccaaggtggaggagcgagtcaccaccatctgccaacgagaaaac
tctttttacgtggacacagtgcgagcgttccgggaccgccgatacgagttcaagggtctg
cacaaggtgtggaagaagaagctctctgcagcagtggagacaggagatgcctctgaagtg
aagcgctgcaagaacatggagatcctctatgactccctgcagctggcccacaagtgcatc
ctcaactctttctacggatacgtcatgcggaaaggagctcgctggtactccatggaaatg
gctggcattgtctgcttcacgggggcaaatatcatcacccaagccagagagctgattgag
cagattgggagacctctggagctggatactgatgggatttggtgcgtccttcccaatagc
ttcccagagaacttcgtcatcaagtcaaccaatatcaagaagccaaaagtaaccatctct
tacccaggtgccatgctgaacatcctggtgaaggagggcttcacaaatgaccagtaccag
gaactgcaggatccagcctcgctcacctacaccacacgctcagagaacagcatctttttt
gaagtggatggtccgtacctggccatgatccttccagcctccaaagaggagggcaagaag
ctgaagaaaaggtatgccgtgttcaacgaggatgggtccctggctgagctgaagggcttt
gaggtgaaacgccggggagaactgcagctggtgaagatattccagtcatctgtgtttgaa
gcctttctgaaaggcagcaccctggaggaggtctatgcttctgtggccaaggtggctgat
tattggctggatgtgctctacagcaaggctgccaacatgcctgattcagagctgtttgag
ctcatctcagagaaccggtccatgtcacgcaaactggaggactacggggagcagaagtcc
acctccatcagcactgccaagcgcctggctgagtttttgggggaccagatggtgaaggat
gcagggctgagctgtcgcttcatcatttccaagaaaccagaagggtctccagtcaccgag
agggctatccctcttgccatcttccaagccgagcccagcgtgcgcaaacactacctccga
aaatggctgaagagcccctcgctgcaggacttcaacatccgtgcgatcctggactgggac
tactacatcgagagactgggcagcaccattcagaaaatcatcaccattcctgcagccctg
cagcaggtaaagaacccagtgccgcgggtccgacacccagactggcttcataagaagctc
ctggagaagaatgatgtgtacaaacagaaaaaaatcaatgagctctttgtttcagaaggc
aagaaacaggttcttgccagccggcctgtggagggggcacccagctcacaggtgggtgac
atagaggactttggggctgtcaagatccctcagccacttgttcccattgcaaataagcgg
aagcgcatccctgcagcagaggaaagccaacagctgtcccaggacctggagctgtcccag
tcctggcgggagatcctgggaccacctccaccccttggcaccaccaaggaagagcacctg
gtctggctgcgcttccagcagaagaagtgggagctgcaggctcggcagcggaaggagcgg
cggaagaggcggcggctggaggacgatggcgggggggcagggggaggagcagtgcgtgat
gctctctccaaagggctgggcagttacctgcgccagagagcgcgcagcatcctggactta
ccctggcagctcgtgcagatcgctgagactggccagcctgggctgttccggctgtgggca
gtgatagggagtgacctgcactgcatcaagctgatcccccgtgtcttctatgtcaaccag
cgcatcccaaagcctgaggagggaacagcctacaggaaggtaaacaggatcctgccccgc
tcaaacttagtttataacttgtacgaatactctgtccctgaagacatgtaccaagagcac
gttaacgaaatcaacgcagacctctctgctccagacatcgagggagtgtatgagacacag
gtgccgctgctgttccgtgcgctcgtccgcctgggctgcgtgtgcatggtcagcaggcag
ctcgtgcggcacctggcggggcgagaggctgacaccttcagcatcgagcacctggagatg
cgctcgctggcccagttcacctacctggagccagggagcattcgccacatctacctgtac
cacagctgccagggcagcaaggcgctgctgggcctcttcatcccctcccagcgcaaggct
gccgtcttcgtgctggacaaggtacggagcaaccagatgccaaacctcaccaccttgttc
tcagtggagcgtgcggctctgctgggaaaggtgggcgaggagctgctgcccccagacaaa
cacaccttcgaggtgcgcgctgagaccgaccccaaggccatttacagaggtgttcagcgg
ctgctcttgggctacaaggacgagcgccggggccccacgttggtggctgtgcagtccaac
tgggacctgaagcggctggcgagcggcatccccagcattgaggagttccccttggtcccc
atccggctggcagatgacatcagctactctgtgctggactggcagcgccacgccgcccgc
cgcatgattcgccactacctcaacctagacacctgcctctcccaggcgtttgagatgagc
aggtactaccacatccccattgggaacctccccgatgacatctccaccttcggctctgac
ctgttcttctcgcgccacctttgccgtcacaaccacctgttgtggctgtcccccacggcc
cgccccgacctggggggcaaggaggccgatgacaaccgcctggtcatggagtttgatgag
agagcttcagttgagatcaacaaccctggctgctactccacagtgtgtctggagttggac
atccagagcctggctgtgaacaccgtgttgcagtcccaccacgtgaatgacatggaagga
ggttccagcatgagcattagcttcgatgtgattcagcaggcatccttggaggacatggtg
acagggaaccaagctgccaacatcccagccagctatgatgagactgccctctgctccaat
gctttcaggattttgaagagcatggtggtgagctgggtgaaggagatcacgcagtaccac
aatgtctatgcagacaaccaggtcattcacttttaccgctggctccgctctccttcctcc
ctgctctatgacccagcactgcaccgcacgctccacaacatgatgaagaagcttttcctg
cagctggtggccgagttcaagcgcctgggctcctctgtggtctacgccaacttcaaccgc
atcatcctgtgcaccaagaagcggcgcattgaggatgccatcagctacatggagtacatc
atcaacagcatccactccaaggagatcttccattctctgaccatctcattctcccgctgc
tgggagttcctgctctggatggacccagcaaattatggaggtatcaggggaaaagtggat
tctcgcatccactatggggagaaggacaccagcaagaggcaggcattggaggaggagagc
gaggaagaggaggaggaggaggtggcgagggaagaagaggaggaagaaggggatccagat
gtggaggagctgttggagaacagctggaacattgcgcagttcctgccccaggccggctcc
tgccagagctacttcttgatgatcgtgtcagcctacatcgtggctgtgtaccacagcatg
aagggggaactgcggcgtaacacccctgggagcacgcccatcaagaggaggagcaccagc
caggtgtcccaggaggctctgggggagctgagggccatgcctggcatgatcaccttctca
caagattatgtggccaatgagctcacccaaagcttcttcaccatcacccagaagatccag
aagaagatggctggttcccggaatgctacagagccctcagacatgttcccagtcctgcct
ggctcctacctgccactcaacaacccagctctggagttcatcaaatacgtttgcaaggtc
ctctccctggatgccaacattaccaaccaggtgaacaagctgcgccgggacctgctgcgc
ctcattgaggtgggcgagttctcagaagcagcccagtttcgggacccttgccgctcctat
gtgcttcctgaagtcatctgcaggaactgcaacttctgcagggacctggacctgtgcaag
gacccttctctttcccaggacaggttggtgctgcctggctggcagtgccccaactgccac
gtgcagtatgatatcgatgccattgagatggcactggtggaggccctgcagaagaagctg
atggccttcgtgctccaggacctggtgtgcaaaaagtgtcgtgctgtgaaggaggcacac
atgcctgtgtactgcagctgtgctggagacttcaccctcaccatctcctcccaggccttc
atggaccatgtcagtgtcttccagaacatcgcccggcactatggcatggcctacctgctg
gaaaccattgaatggatgctgcacactaacctccagctccagcagtga
DBGET
integrated database retrieval system
