Oenanthe melanoleuca (Eastern black-eared wheatear): 130259981
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Entry
130259981 CDS
T09236
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
KO
K08524
retinoid X receptor alpha
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03320
PPAR signaling pathway
oma04148
Efferocytosis
oma04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130259981 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130259981 (RXRA)
03320 PPAR signaling pathway
130259981 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130259981 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oma03310
]
130259981 (RXRA)
Transcription factors [BR:
oma03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130259981 (RXRA)
Nuclear receptors [BR:
oma03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
130259981 (RXRA)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
130259981
NCBI-ProteinID:
XP_056360835
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Position
17:complement(3588940..3691839)
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AA seq
467 aa
AA seq
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MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNSVTSTEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMLMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacacttcctgccgctggatttctccaaccaagtgaattccacgtcgctg
aactcgcccacgagccgggggcccatggccacgccgtccctgcacccgtccatcgggccg
ggcatcggctcctcgctgggctcgccaggccagctgcactcgcccatcagcaccctcagc
tcgcccatcaacggcatggggccccccttctccgtcatcagctcccccatgggcccacac
tcgatgtccgtcccctccacgcccagcctggggtttggaaccagcagcccgcagctcaac
tctcccatgaactccgtcaccagcacagaagacatcaagccacccctggggctcaacgga
gtcctcaaagtgccagcacacccctcagggacgatggcctccttcaccaagcacatatgt
gccatctgcggggacagatcttcgggtaaacattacggggtttacagctgtgagggctgc
aaagggttcttcaagcgcacggtgaggaaggacctgacctacacgtgccgggacaacaag
gactgcctgatcgacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgt
ctggccatgggcatgaagagagaagccgtgcaggaggagaggcagcggggcaaggaccgc
aacgagaacgaggtggagtccacgagcagcgccaacgaggacatgcccgtggagaagatc
ctggaggctgagctggctgtggagccaaagactgagacctacatcgaggcaaacatgggc
ctgacacccagctcgcccaacgaccctgtgacaaacatctgccaggcagcagacaagcag
ctcttcaccctggtggagtgggccaagaggatcccccacttctctgagctgcccctggat
gaccaggtcatcttgctcagagcaggctggaacgagctgctgatcgcctccttctcgcac
cgctccatcgccgtcaaggacgggatcctgctggccacggggctgcacgtgcacaggaac
agcgcccacagcgccggcgtgggggccatcttcgacagagtactgacagagctggtgtcc
aaaatgagggacatgctgatggacaagacagagctgggctgcctgcgagccatcgtcctc
ttcaaccctgactccaaggggctgtcgaacccggcggaggtggaggcgctgcgggagaag
gtgtacgcgtcgctagaggcttactgcaaacacaaataccccgaccagcccggcaggttt
gccaagctgctgctgcgcctgccagccctgcggtccatcggcctgaaatgcctggagcat
cttttcttcttcaagctaataggcgacacgcccatcgacaccttcctgatggaaatgctg
gaagcgccgcaccaaatgacttaa
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