Oenanthe melanoleuca (Eastern black-eared wheatear): 130260059
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Entry
130260059 CDS
T09236
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130260059 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oma03041
]
130260059 (PRPF4)
Spliceosome [BR:
oma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130260059 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD_LRWD1
WD40_like
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
130260059
NCBI-ProteinID:
XP_056361042
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Position
17:9995070..10003660
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AA seq
529 aa
AA seq
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MATARAPAARSAARPPEPPKAKAAEEGEAPPAKRAPIFYGSLEEKERERLAKGEAGLLGK
EGMKAALEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDSEVKACLR
ALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTWYHEGPRS
LKTARLWLANYSLPRAAKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCSQIGDDRP
LSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKD
VSLASCAADGSVKLWNLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLE
AQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGI
NFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVRFEPNHGNFLLTGAYDNT
AKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgctcgggctccggcggcgcgcagcgcggcgcggccccccgagccccccaag
gccaaggctgccgaggagggcgaggcgcccccggccaagcgggcgcccatcttctacggg
agcctggaggagaaggagcgcgagcgcctggccaagggcgaggcggggctgctgggcaag
gagggcatgaaggctgccctggaggctggcaacatcaacatcagctctggggaggtgttt
gacctcgaggaccacatgagcgagcggcaggccgaggtgctggcggagttcgagcgccgc
aagcgcgcccggcagatcaacgtgtccacggacgactcggaggtgaaggcgtgtctgagg
gccctgggcgagcccatcacgctcttcggggaggggcctgccgagcgcagggagaggtta
aggaacatcctctcagtggtcggcacagatgcattaaaaaagaccaggaaagatgatgac
aggtcaaaaaagtccaaagaagagtatcagcaaacctggtaccacgagggcccacgcagt
ctgaaaacagccaggctgtggctggccaactactcactccccagggcagcgaagcggctg
gaggaggccaggctgctcaaggagatccccgaggccaccaggacatcccagaggcaggag
ctgcacaaatccctgaggtccttgaacaatttctgcagtcagatcggggatgatcgccca
ctgtcctactgccacttcagccccaactccaaactgctggccacagcctgctggagtggg
ctgtgcaagctctggtctgtgcctgactgcaacctggtccacaccttacgaggacacagc
accaacgtgggggcaatcgtgttccaccccaaggccacagtgtccctggacaagaaggat
gtgagcctggcctcctgtgcagctgatggctctgtcaaactctggaacctggaaagtgac
gagccggtggcagacatcgagggacacagcatgcgcgtggcgcgcgtcatgtggcacccg
tccggccgcttcctgggcaccacctgctacgaccactcgtggcgcctgtgggacctggag
gcgcaggaggagatcctgcaccaggaggggcacagcaagggcgtctatgacatcgccttc
cacaccgacggctccctggccggcaccggaggcctggatgcctttggccgggtgtgggac
ctgcgcacaggccgctgcatcatgttcctggaggggcacctgaaggagatctacgggatc
aacttctccccaaacgggtaccacgtggccacgggcagtggggacaacacgtgcaaggtg
tgggacctgcggcagaggaaatgcatctacaccatccctgcccaccagaacctggtcacc
ggcgtcaggttcgaacccaaccatgggaatttcctgctcacgggcgcctacgacaacacg
gccaagatctggacccaccctggctggtccccactgaagaccctggcagggcacgagggg
aaggtgatggggctggacatctccctggatgggcagctcattgccacctgctcctacgac
agaaccttcaagctctggacagccgagtag
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