Oenanthe melanoleuca (Eastern black-eared wheatear): 130260180
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Entry
130260180 CDS
T09236
Symbol
LAMC3
Name
(RefSeq) laminin subunit gamma-3 isoform X1
KO
K06247
laminin, gamma 3
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04510
Focal adhesion
oma04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130260180 (LAMC3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130260180 (LAMC3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
Alpha-2-MRAP_C
CdaS_N
Motif
Other DBs
NCBI-GeneID:
130260180
NCBI-ProteinID:
XP_056361319
LinkDB
All DBs
Position
17:complement(5048566..5067420)
Genome browser
AA seq
1578 aa
AA seq
DB search
MAQPPGLCLLALLALGLALGTGGSSACRDPRGQPRRCMPDFENAAFGRAVRASNTCGSPP
EDYCLHMGAHHGSALCHRCDASDPRRHHNASLLTDFHSQEESTWWQSQSMAFGIQYPNSV
NITLHLGKAYEITYVRLKFHTSRPESFAIYKRSRAGGPWVPFQFYSASCEKTYGKRPRQF
LRPGEDEQVAFCSDEFSDISPLSGGNVAFSTLEGRPSAYNFDGSPALQEWVTVTDLLISL
NRLNTFGDDIFKDPKVLQSYYYAISDFSVGGRCKCNGHASECAEDEAGQLLCVCQHHTAG
PDCQRCQPFYQDRPWARGTAEAANECLPCNCSGRSEECFYDRELFRSSGHGGHCLNCRDN
TAGPHCESCRQNYYRWEPQGACQPCHCHPAGSLQPQCDNSGTCVCKANVTGWKCERCKDG
YHSLSEGGCRPCTCDPAGSVGTCDPNTGHCTCKERVEGHLCNRCQPGWFNLQPHNPIGCS
SCFCYGHSSACRAADGYEEIHIRSDFSHGLEGWTATAPGTTDLPLHWAGREIITEWDGEQ
PVDFLAPDKFLQDQRLSYGQLLSLLLGVENRTRTETGVPLLQVQLLLEGEGMEITMSSSK
SQPQHGKQAVTFRLHEAEEGAEPLLSAFSFQRLLSNLTALRLRVSPGPGRGRLSLSQVQL
TSARPGPGSRAGWVEECTCPMGYTGQFCQSCAPGFKRDIPFGSPFISCVPCTCNQHGDCH
PLTGHCRCLHNTEGPSCERCSPGFYGNPFAGRADDCKPCPCPGRSPCTEVPGSGEVVCTH
CPPGQRGKRCELCDDGFFGDPLGQRGPVHPCEPCQCHGNVDLNAVGNCDPVSGRCLRCLY
NTMGEHCERCRPGFYGDALAPSPAGKCAPCDCNPKGSDPGLEGCDPGTGQCHCLPHVTGR
ACGQCQPGYYGLEPTVGCRSCECHPTGSRESGCHVLTGQCSCQPGVTGKKCDRCQHGFFG
FSARGCRACNCSPLGSTTPQCHENSTCLCHPGFVGYKCDQCQANFFLDPLSSRCQQCPAC
YGLVKDEAEQLKARLQEMEEWLQKPGCDSHPGQSAMLGDAARGDGLPSPHLLRGAWATLL
VQVGQLAGALNTAQGRLSNASQASSCSDHGPPKTCTLLSEIRAVLHSAQQEILHAADTLA
TMIPQEIPQQPTNWSHWALEAQALSKSHKESMAQVEAVVRRALSVSNASSELLQNLLQGN
TTRDMQRELENGYEEIQQAQEELGAGVAEAAVEARRALTAVEQAHADLAERLLQVAALGQ
QVLSMQAGDLAQDVAVLEQAAAAQELLAQQAVEASHTLAAGLSLELQRTHAFKQLQDQAG
SAHDTATMAVSRGKAVLSDAKSLLASLEGMKKVLGHRKSQAALRRRMATVQDRVMVDAQR
KIKQAEKTLGNSLSISTAAQRRAGEAEQVSEESAKRARAVLQGSKQTLRHASQLATRANK
TQQELSRQEHMAEKLRGDLEEAQQVGSEVSEMAKSLQEARGSLLSDIETLNDLLNRLGNL
EQDTEVDAVLSAGRLQLEQLWQRLATPGALAGQLSQLQQEAARQQEKIQAFESDLAEIRA
DKQNLEDILRSLPESCSK
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcctcccgggctctgcctgctggccctgctggcgctggggctggcgctgggg
acggggggctcctccgcctgccgggaccctcgggggcagccccgccgctgcatgcccgac
ttcgagaacgccgccttcggccgggccgtgcgggccagcaacacgtgcgggtcgcccccg
gaggattactgcctgcacatgggagcgcaccacggcagcgccctgtgccaccgctgcgac
gccagcgacccccggcgccaccacaacgcctccctgctcaccgacttccacagccaggag
gagagcacctggtggcagagccagtccatggccttcggcatccagtaccccaactccgtc
aacatcaccctgcacctgggcaaagcctacgagatcacctacgtgcggctcaagtttcac
accagccgccccgagagcttcgccatctacaagcgcagccgcgccggggggccctgggtg
cccttccagttctacagcgcgtcctgcgagaagacctacggcaagcggccgcggcagttc
ctgcggccgggcgaggacgagcaggtggccttctgcagcgacgagttcagcgacatctcc
ccgctcagcgggggcaacgtggccttctccaccctggagggacggcccagcgcctacaac
ttcgatggaagccccgcgctgcaggagtgggtgacagtcaccgacctgctcatctccttg
aaccggctcaacacatttggggacgacatcttcaaggaccccaaggtgttgcagtcgtac
tactatgccatatctgacttctctgttggtggcaggtgcaaatgcaatggccacgccagc
gagtgcgccgaggacgaggccgggcagctgctgtgtgtgtgccagcaccacacggccggc
cccgactgccagcgctgccagcccttctaccaggaccggccctgggcgcgcggcacggcc
gaggcggccaacgagtgtctcccttgtaactgcagcggccgctccgaggagtgtttctac
gaccgggagctgttccggagcagcgggcacgggggacactgcctcaactgccgcgacaac
acggcggggccgcactgcgagagctgcaggcagaactattaccgctgggagccgcaggga
gcctgccagccctgccactgccaccccgcaggctccctgcagccccaatgtgacaactcg
gggacctgcgtctgcaaagccaacgtgacgggctggaagtgtgagcgctgcaaggacggc
taccacagcctcagcgaagggggctgcagaccctgcacctgtgacccggcgggcagcgtg
ggcacctgcgaccccaacacggggcactgcacctgcaaggagagggtggaggggcacttg
tgcaacaggtgccagccgggctggtttaacctgcagccccacaaccccatcggctgcagc
agctgcttctgttacggccactccagcgcctgcagggcggcagatggctacgaggagatt
cacatccgctccgacttcagccacgggctagagggctggactgccacagctccaggcacc
acagacctgcctctgcactgggctggccgggagatcatcaccgagtgggatggagagcag
ccagtggattttcttgcaccagataagtttctgcaggaccagcgcctcagttacgggcag
ctcctgtccctgctgctgggagtggagaacaggacaagaacagaaactggggtgcccctg
ctccaggtccagctgctgctggagggtgaggggatggagatcaccatgtccagcagcaag
agccagccccagcatggaaagcaggctgtcaccttcaggctgcacgaggcagaggagggt
gcagagcctttgctgtcagccttcagcttccagcgcctgctctccaacctgactgccctg
cgcctccgcgtgagccccggccccgggagaggcaggttgtccctgagccaggtccagctc
acatctgctcgccccgggccaggcagccgggcgggctgggtggaggagtgcacgtgtccc
atgggatacaccgggcagttctgccagtcctgcgcacctggattcaagagggacatccca
ttcggcagccccttcatcagctgtgtgccctgcacctgcaaccagcacggggactgccac
cccctcacagggcactgccggtgcttgcacaataccgagggtccctcctgcgagcgctgc
agccccggcttctacgggaaccccttcgcagggcgcgccgatgactgcaagccctgcccc
tgccccggccgctcgccctgcaccgaggtgcccggcagtggggaggtggtctgcacccac
tgccccccggggcagagaggaaagcgctgtgagctctgtgatgacgggtttttcggggac
cccctggggcagagaggtcccgtgcacccctgcgaaccctgccagtgccatgggaacgtg
gatctcaacgccgtggggaactgcgaccccgtgtctggccggtgcctgcgctgcctgtac
aacacaatgggcgagcactgcgagaggtgccggccgggcttctacggcgatgcgctggct
cccagccctgctgggaagtgtgcaccttgtgattgcaaccccaagggctcagacccaggg
ctggagggctgtgatcctggcacaggccagtgccactgccttccacacgtgacaggcaga
gcctgtgggcagtgccagcctggctactacggcctggagcccaccgtggggtgcaggagc
tgcgagtgccacccaacagggtcacgggagagcgggtgccacgtgctgacggggcagtgc
tcctgccagccaggcgtcacagggaagaaatgtgatcgatgccagcacggcttcttcggc
ttctctgccaggggctgccgagcctgcaactgctccccactgggctccaccaccccgcag
tgccacgagaacagcacctgcctctgccaccccggcttcgtgggctacaagtgtgaccag
tgccaggccaacttcttccttgacccactgagctcccgctgccagcagtgtcctgcctgc
tacgggctggtgaaggatgaggctgagcagctgaaggccaggctgcaggagatggaggaa
tggctgcagaaacccggctgtgactcccacccaggccagtctgccatgctgggagatgca
gcccgtggagatgggctgcccagcccacacctcctgagaggtgcctgggccaccctcttg
gtacaggtggggcagctggcaggggcactgaacactgcacaaggccgtctcagcaatgcc
agccaggccagcagctgctctgaccacggaccccccaagacctgcaccctgctgtcggag
atcagggctgtgctgcactcagcacagcaggagatcctgcacgctgcagacaccctggct
accatgattccccaggaaatcccacagcagcccacaaactggagccactgggcactggag
gctcaggctctgtccaagagccacaaggagtccatggcacaggtggaggcagtggtcagg
agagcactgagtgtctccaacgccagctctgagctcctgcagaacctgctgcaggggaac
acgacacgggacatgcagagagagctggagaacgggtatgaggaaatccagcaggcacag
gaggagctgggtgctggcgtggcagaggcggcagtggaggccaggagagctttgacagct
gtggagcaggcacatgctgacctggctgagagacttttgcaggtggctgctctggggcag
caggtgctgtcaatgcaggctggagacctggcacaggacgtggcagtgctggagcaggca
gcagcagcccaggagctgttggctcagcaggctgtggaggcatctcacacactggcagct
gggctgagcctggagctgcaaaggactcatgccttcaagcagctgcaggaccaggctggc
tctgcccatgacacagccaccatggctgtgtcccgaggaaaagctgtgctctccgatgcc
aagtccctcctggccagcttggaaggcatgaagaaggtgctggggcatcggaagagtcag
gctgccctgaggagaaggatggccactgtgcaagacagagtgatggtggatgctcagagg
aagattaaacaggcagagaaaacactgggaaactccctgtccatctccactgcagcccag
aggagagctggggaggctgagcaagtctctgaggagagtgccaagagggcacgggctgtg
ctgcaggggagcaaacagaccctcagacacgccagccagctcgccacacgtgccaataag
acccagcaggagctctcccggcaggagcacatggctgagaagctcaggggagacctggag
gaagcacagcaggtggggtcagaggtgagtgagatggcaaaaagtctccaggaagcccgg
ggttcactcctgtccgacatcgagaccctgaatgacctgctgaacagactaggtaacctg
gagcaggacacggaggtggacgcagtgctgagtgctgggaggctgcagctggagcagctg
tggcagcggctggccacaccaggagccctggctggccagctcagccagctgcagcaggag
gcagcacggcagcaggagaagatccaagcatttgagagcgacttggctgagatccgggcc
gacaagcagaacttggaggacattttgaggagcctccctgagagctgctccaagtga
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