Oenanthe melanoleuca (Eastern black-eared wheatear): 130260194
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Entry
130260194 CDS
T09236
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04510
Focal adhesion
oma04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130260194 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130260194 (RAPGEF1)
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Motif
Pfam:
RAPGEF1_N
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
130260194
NCBI-ProteinID:
XP_056361336
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Position
17:4791711..4874329
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AA seq
1225 aa
AA seq
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MSGKIEKADSERSHLSSFTMKLKGKFHSPKIKRTPSKKGKQAELTVKTPEKSVNKNVSWL
EEKEKEVVSALRYFKTIVDKMAIDNKVLEMLPGSASKVLEAILPLVQTDPRIQQSSAISS
CYSRVYQSLANLIRWSDQVMLEGLNSEDKEMVTTVKDVIKAVLDGVKELVRLTIEKQEHP
SPTSPVKPSLPACKSDSPSELPLTDREMEILNKTTNLTQSNELLTDSMDEEVAPPKPPLP
SIRVAENSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRR
LSGGSHSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDQSDHYDPDY
EFLQQDLSNADQIPQQGSSVLSPLPESLGESGSPFHGQTFQLPQGSSPPLEFCSPSGAAQ
PTETPPALPEKKRRSAASQTSENSGCRVSYERHPSQYDNISEDDLQSVAPSVPFTPFAAV
LPFQQGNSSAPVEFIADFAAPDSNSDPEKPPPLPEKKNKHMMAYMQFVEDYSEPQPSMFY
QTPQNEHIYQKKNKYLREVYGINDSFISLDPSQELAPPPALPPKQRQLQASYAASSFSSV
SYCVQQPKVPFTPEDCSATQGLTMSVSNSFLSRHSSFPVHSYKSVFRSYSQDFVPHNQVS
IPPFLSSTSSSCSTPPFPPVHASQSPDLAVPAAASQPPSTVDVPNSSSQESSFNGNAPVC
LPSETSLTDSLQTPSSENASEEAGEGEYVNLYSSGQSNGELPVSEGESPPVKDGHSKDSA
LSSSAMGKEGKDGAERQPQSPDTLESSQLEEEVDELSLIDHSEIMSRLTLKQEGDDGPDV
RGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYEKFCHFPDTFKK
RVSKNTFFVLVRVVDELCLVELTEEILKLLMDLVFRLVCSGELSLARVLRKNILDKVDQK
KMLSYANSIKPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQN
EEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAI
LSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALADVEPPCIPYLGLILQDL
TFVHLGNPDYIDSKVNFSKRWQQFNILDSMRCFQQVHYDIKRNDDIVSFFNDFSDHLAEE
ALWELSLKIKPRNITRRKTDREEKT
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaagatcgagaaagcagattctgagcgttcccatctctcctcgttcacgatg
aagttgaagggcaagtttcattcaccaaaaataaagagaacaccctcaaagaaagggaag
caagctgagctgacagtgaaaacaccagagaagtcagtgaacaaaaatgtatcatggctg
gaggaaaaggagaaggaggttgtcagtgcattgcgctactttaagacaattgtggacaaa
atggcaattgataacaaagtgttagagatgctgccaggctcagcaagcaaagtgctggaa
gccatcctgcccttggtgcaaactgacccacgaatccagcaaagctctgccatctcatcc
tgctacagccgagtgtaccagagcctggccaacctcatccgctggtctgaccaggtgatg
ctggaggggctcaactcagaggacaaggagatggtgacaacagtgaaggatgtcatcaaa
gctgttctggatggagtcaaggagctggtcagactcacgattgagaagcaggagcatccc
tcccccacaagcccagttaaacccagtttgccagcatgtaaatctgacagcccatcagaa
cttccccttaccgaccgggaaatggagatcctcaacaaaacaaccaatttgactcaatcc
aacgagctgctgactgactccatggatgaagaagttgcacctcctaaaccccctctgccc
agcattcgtgtggcagagaacagccctccaccagcactgccccctaaaaaacgtcagtcg
gcgccttccccaaccagagtggctgttgtggcccccatgagccgagctaccagtgggtcc
agtttacctgttgggatcaacagacaggactttgatgttgactgctatgcccagaggagg
ttgtcaggtggaagccactcctacgggggggagtctcctcgcctgtccccgtgcagcagc
atcggcaaactgagcaagtctgacgagcagctctcgtccctggaccgcgacagcggccag
tgctcccgcaacacaagctgtgaaaccctggatcaatcggatcactatgacccagactat
gaattcctgcagcaggacctctccaacgctgatcagatccctcagcaggggtccagtgtc
ctcagcccattgccagagtccttgggtgagtctggctcccctttccacggacagactttc
cagctcccgcagggcagctctcctccgctggaattctgcagcccctcgggagcagcacag
ccaacagagactcccccagctttgccagagaagaagaggaggagtgcagcctcccagacc
tcagagaactcgggctgcagggtgtcctacgagaggcacccctcccagtacgacaacatc
tccgaggacgacctgcagagcgtcgccccgtcagtgcccttcacgcccttcgctgctgtt
ctgcctttccagcaaggaaactcttcagcaccagtggaattcattgcagattttgctgct
ccagattcgaacagtgacccagaaaagcctccacctctgccagagaagaaaaacaaacac
atgatggcctacatgcagtttgtggaagattactcagagccacagccctccatgttctac
cagacccctcagaacgagcacatctaccagaagaagaacaagtacctcagggaagtctat
gggatcaatgactcctttatcagcttggacccctctcaagagctggcacctcctcctgcc
ctccctccaaagcagaggcagctgcaggcctcctatgctgcctcttctttctcctctgtc
tcctactgtgtccagcagcccaaagtgcccttcacccccgaggactgcagtgccactcag
ggcctcactatgtcagtctctaactcctttctcagccggcacagctccttccctgtgcac
tcgtacaaatctgtgtttaggtcctactcccaggactttgtgcctcacaaccaagtctcc
atacctcctttcctctcttctacctcctcctcctgctccaccccgcctttcccgcccgtc
cacgcatcccagagccccgacctagcggtgcccgctgcagccagccagccccccagcact
gtggatgtgccaaactcctcttctcaggagagcagctttaatgggaatgctcctgtctgc
cttccttctgaaacctctctcactgattctctccagacgccttcgagtgaaaacgccagt
gaggaggctggtgagggtgaatatgtcaatctgtattcctctggccagagcaacggggaa
ctccctgtgtctgaaggagaatctccccctgtcaaagatggccactccaaagactcggct
ttgagcagcagtgccatggggaaggagggcaaagatggtgctgaaaggcagccacagtca
ccagatactttggagtcatcacagctggaggaagaggtagatgagctgtcccttattgac
cacagtgaaatcatgtctagattaacactgaagcaagagggggacgatgggccagatgtc
cgtggtgggtctggagacattctgctggtgcatgccacagagacagacaggaaagatctg
gtgctgtactgtgaagcatttctgactacatacaggacattcattaccccagaagagctc
atcaagaagctgcagtacagatatgagaagttttgccacttcccggacacgttcaagaag
cgggtcagcaagaacaccttcttcgtgctggtgcgagtggtggacgagctctgcctggtg
gaattgacagaggaaatcctcaagctgctgatggacctggtgttcaggctggtgtgcagt
ggggagctcagcctggccagagtgctgcgcaagaacatcctggataaggtggatcagaag
aaaatgctgagctacgccaactccatcaaacctctcgctgccagaggggtggcagccagg
ccagggacactgcatgatttccacagtcatgaaatagctgagcagctgaccctgctggat
gctgaactcttctataaaatcgagatcccagaagttttgctttgggcaaaggaacaaaat
gaagagaagagtcccaatctgacacagttcacagagcactttaataacatgtcctactgg
gtccgttcaataattatgctacaagagaaagcccaggaccgagagaggctgctccttaaa
tttataaagattatgaagcacttacgaaagctgaataattttaattcctatctggccatt
ctttctgcactggattctgcccccatccgaaggctggagtggcagaagcaaacctcagag
ggcctggctgagtactgcaccctgatcgacagctcctcgtccttccgcgcctaccgagct
gccctggccgacgtggagcccccctgcatcccctacctaggcctgattctgcaggacctg
acctttgtccatctgggaaaccctgattacattgacagcaaagtgaacttttccaagcgc
tggcagcagtttaacatcctggacagcatgaggtgcttccagcaagtccattacgacatc
aagaggaacgacgacatcgtgtcattcttcaacgacttcagcgaccacctggctgaggag
gccctgtgggaactgtccctgaaaatcaaacctcgcaacatcaccaggcggaaaacagat
cgggaggagaaaacctag
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integrated database retrieval system
