Oenanthe melanoleuca (Eastern black-eared wheatear): 130260368
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Entry
130260368 CDS
T09236
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130260368 (TNRC6C)
03036 Chromosome and associated proteins [BR:
oma03036
]
130260368 (TNRC6C)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130260368 (TNRC6C)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130260368 (TNRC6C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
RRM_1
UBA
RRM_occluded
UBA_HERC2
UBA_Ucp12
RRM_ACIN1
THOC7
Motif
Other DBs
NCBI-GeneID:
130260368
NCBI-ProteinID:
XP_056361651
LinkDB
All DBs
Position
18:complement(7676061..7774106)
Genome browser
AA seq
1963 aa
AA seq
DB search
MEEKKKKKQEEKKKKEGAQKKAAEQKTKVPEAVKSSLSQPQAAGTGPSTSTSTLSSSSNG
KRAAANGQQPAASRYLPREVPPRFRQQEHKQLLKRGQPLPAGAAASPPPPPPPPPPPQQG
QQHPSKTQPDLSHSGLGDHYENSHWGQQPAFRSEGNCSWDKVIIDRTDKEAWPSITGAET
ESASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGANGALVQSTSNQSALG
AGGANGNGGSARVWGVAAGSSSGLAHCSASGGDGKMDNMMGDGRSQNCWGASNSNAGINL
NLNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQE
STEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAII
PPHLQGLPGANGTAVSQVSGGSGEGMGSSVWGMSPGNPAAGNSNSGFSQGNGDTVNSALS
AKQNGSSSAVQKEGNGANAWDSGPPSGPGVLAWGRGGGGVGSVHSGAWGHPSRSASNGVN
GEWGKPPNQHSNSDINGKGSTGWESSSVTSPNPAMQQGNEQMNSWAKAAASGTTASEGSN
DSGGSQNEGSTGREGAGEGRRRDKGMIDQGQVQLPRNDLDPRVLSNTGWGQTPVKQNTAW
EFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMNSTNTSSVSGWVNSPPAAVPTN
TGWGDNNNKAPNGPGGWGESASSTTVNNAAAAKSGHAWSGTANQEDKSPTWGEPQKPKSQ
NWGDGQKSNPSWTSGGGDWTDSSSVPGHLGDGKKNGSGWDSDSRSGSGWNDSTKSGTSGW
GNGTNSKANTGTSWGESLKPGPQQNWANKPQDNNVSNWGGAASVKQTGSGWVGGPVPAKQ
KENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNPIIQSSTTTNTT
TTSTIINTNMVEPQPSHQSSAQPNRSPLLGPAGWGEMPAVHTKSEASWGEPSSPSAAVDN
GTSAWGKPPSSGTGWGENPAEPAGTYGRTNAPAAAPALCKPASKSMQEGWGSGGDEVNLS
TSQWEDEEGDMWNNTASQESSSSCNSWGNAPKKGLQKPKTNPRLSLGTFWRTERKRLLKD
FVIEKLHRDLLKGMKTSSKQDEAWIMNRLIKQLTDMGFPREPAEEALKSNSMNLDQAMSA
LLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPPISKESSMDRPTFLDKLTLSFSNQDGGLV
EEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASGLGMQNLNSSRQIPSGNLGMFGNSGAA
QARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLSPAQLTSPINN
PQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQVARTINNMQQQIQQHQR
QLAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPHPQAPGLPDLQTKEQQSSPNTFAPYPL
AGLNPNMNVNNMDITGGLSVKDTSQSQSRLPQWTHPNSMDNLSSAASSLDQNSSKHGAIP
GGLSIGPPGKSSLDDSYGRYDLIQNSESPASPPVAVPHSWSRAKSDSDKISNGSSINWPP
EFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGSSPTSSQNATL
PSSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKSTWSSGPISHTQASLSHELWKVPRNT
TAPTRPPPGLTNTKPSSTWGASPLGWTSSSYSSGSAWSTDSSGRTSSWLVLRNLTPQIDG
STLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEE
EVNRFLAQGQALPPTSSWQSNTGSTPSRLGSSGSSHGLVRPDAGHWNPPCLGGKGSSDLL
WGGVPQYSSSLWGPPSADDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaaggtgctcagaaa
aaggctgctgaacaaaaaaccaaagtgccagaagctgttaagagcagtttaagccagccc
caagctgcgggtaccggtcccagtacttccaccagcactctcagcagcagcagcaatggc
aagcgcgcggctgccaacgggcagcagcctgcggcgtcccgctacctgccccgcgaggtg
cctccccgcttccgccagcaggaacacaagcagctcctaaagagggggcagccactgccc
gccggggctgcagccagccctcctcctcctcctcctcctcctcctcctcctcagcaggga
cagcagcatcccagcaagacccagccagatctcagccacagtggattgggagaccattat
gagaattcccactggggacagcagcccgctttcaggagtgaaggcaactgcagctgggat
aaagtgataatagacaggactgacaaggaagcgtggccttccattaccggagctgagact
gagtctgcctcagaatgtactacagacactgactctgcctccaactgtggctcagagaac
agtagcatggctacagggagtgcccaaggcaacttcactggacatacaaagaaaactaat
ggcaataatggcgccaacggagcactcgtccaaagcacttctaaccagagtgcccttgga
gctggtggagcaaacggcaacggcggctcggccagggtgtggggggtggctgcaggctcc
agctctggcctagctcactgctctgccagtggtggggatggaaagatggacaacatgatg
ggagacggtagaagtcagaactgctggggtgcttccaactcgaatgctggcattaatctt
aaccttaaccctaatgccaatccagctgcctggcctgtacttggacatgaaggaactgtg
ggagcaggcaacccttccagtatttgcagtccagtcagtgccataggtcagaacatgggc
aaccagaatgggaacccaacaggcaccttaggtgcttggggaaacttgctgccgcaagag
agcacagaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaac
cttaacactgatggaccaaataacactaaccccatgaactcttcaccaaaccctatcaat
gcaatgcagacaaacggactgccgaactgggggatggccgtgggcatgggggccatcatc
ccgccccacctgcaaggccttcctggtgctaacggaacagcggtttctcaagtcagcggg
ggcagtggtgaaggaatgggcagttcagtatgggggatgtccccaggtaatcctgccgca
ggaaacagcaattctgggttcagtcaggggaatggagacactgtgaactcagcattaagt
gctaaacaaaacggatccagcagcgctgtgcagaaggaagggaacggagcgaacgcgtgg
gactcggggcccccctccggccccggggtcctggcgtggggcaggggcgggggcggggtt
ggcagcgtgcactctggggcctggggccaccccagccgcagcgccagcaacggtgtcaac
ggggagtggggcaagcccccaaaccagcattccaatagcgacatcaatgggaaaggatca
acagggtgggagagctcgagcgttaccagtccaaatcctgccatgcagcagggcaatgaa
caaatgaactcttgggccaaagctgcagcatctggcaccacggctagtgaaggaagcaat
gacagcggtgggagtcaaaatgaaggcagtactgggagggagggggctggagagggcagg
aggagagacaaagggatgattgaccaagggcaagttcagttgccaagaaatgaccttgac
cccagggtcctgtccaatacggggtggggacagacccctgtgaagcaaaacactgcctgg
gaatttgaagagtccccaaggtctgaacggaagaatgacaatggaactgaggcctggggt
tgtgcagctactcaatcttcaaactcaggggggaagaacgatgggtccatcatgaacagt
acaaatacctcttcagtatctgggtgggtcaactctccaccggcagctgttccaacaaat
acaggttggggagacaataacaacaaagcaccaaatggcccaggggggtggggagagtca
gcaagctctactactgttaataatgctgctgctgccaaaagcggccacgcttggagtggg
accgcaaatcaggaggacaaatcacctacctggggtgaacctcagaaacccaaatctcaa
aactggggagatggacagaaatcaaatccgagctggacttcgggaggtggagactggaca
gattcatcatctgttcctggacacttgggtgatgggaagaagaatggatctggatgggat
tctgatagtagatcggggtctggctggaatgattccacaaagtctgggaccagtgggtgg
gggaacggcacaaacagcaaggctaatacaggtacaagttggggggaatctttaaagcca
ggcccccaacaaaattgggctaataaaccccaggacaacaatgtgagtaactggggagga
gctgcttctgtaaaacagacggggtcagggtgggttggtgggccagtgccagccaaacaa
aaagagaactgtgaggcaactggctgggaagagccatctccaccgtccattcgccgcaag
atggaaatcgatgatggtacctcagcttggggcgacccaaattacaacaacaacaagact
gtaaacatgtgggatagaaataatcctataattcagagcagtaccacaaccaacaccacc
accactagcaccattatcaacaccaacatggttgaacctcagccatcgcaccagtcaagt
gcccagccaaaccggtccccgctgcttggcccagcaggctggggagagatgcctgctgtc
cacaccaagagcgaagcttcctggggagagccctcctccccttctgctgcagttgataat
ggcacttcagcctgggggaagccccccagcagtgggaccgggtggggagagaatcctgcc
gagccagcagggacctatggaagaacaaacgctccagctgctgccccagcactgtgcaaa
ccagcttcaaaatctatgcaagaaggctggggcagtggtggggatgaagtgaatctcagt
actagtcagtgggaagatgaagaaggagatatgtggaataatactgcttcacaagagagc
agctcctcctgtaattcctgggggaatgccccgaagaaaggacttcaaaagcccaaaaca
aatccgcgcttgtcccttggtactttctggagaactgaaaggaagagacttcttaaggat
tttgtgatagaaaagctgcacagagatcttttaaagggcatgaagacatctagcaagcag
gatgaggcctggatcatgaaccgtctgataaaacagctcacagacatgggcttccctaga
gagccagcggaagaggccttgaagagcaacagtatgaatcttgatcaggccatgagtgct
ctgctggaaaagaaggtggaaatggacaagcgtggaatgggagtgaccgactataatggg
atggtcaccaaaccccttggctgccgcccaccaccaatctccaaagagtcttccatggac
cgccccaccttccttgacaagctcaccctttctttctccaatcaggatggcggcctagtg
gaagagcccactacttcaccatttttgccttcaccaagcctgaagctccccctttcaaac
agtgcactccctaatcagaccctgggcgggattgcctcagggctgggcatgcaaaacttg
aattcttctagacagataccgagtggcaatctgggtatgtttggcaatagcggagcagca
caagccaggaccatgcaacagccgcagcaaccgccagtgcaacctcttaattcatcccag
cctagtcttcgtgctcaagtgcctcagtttctatcccctcaggttcaagcacagcttttg
cagtttgcagcaaaaaacattggtctcagccctgcacagttaacctcgccaattaataat
cctcagcatatgacgatgttgaaccagctctatcagctgcagctggcgtaccaacgttta
caaatccagcagcagatgttacaggctcagcgtaacgtttccggacccatgagacaacag
gagcagcaagttgcacgtacaatcaataacatgcagcagcagatccagcagcaccagcgc
cagctggcccaggccctgcttatgaagcagcagcctccccctccacatctatctttgcac
ccctctgcaggcaaatcagccatggatagcttttcaccccatccccaggctcccggcctt
cctgacctgcagaccaaagagcaacagtcttcaccgaacacctttgctccttaccctctt
gctggactgaacccgaacatgaatgtaaataacatggacattactggtggtttgtcagtg
aaggacacttctcagtcccagtctcgccttcctcagtggacacaccccaactcaatggat
aatctgtctagtgctgcttcttctcttgaccagaactccagcaagcacggtgctatccct
ggaggtttgagcattggtcctccaggcaagtcctccctcgatgactcctacggccgctat
gatctgatccagaacagtgagtctcctgccagcccacctgtagctgttcctcacagctgg
tcacgtgccaaatctgatagtgataagatttccaatggctccagcatcaactggccacca
gagtttcacccaggagtgccatggaaaggactgcagaatattgatcctgaaaatgaccct
gatgttactcctggcagtgttcctactgggcctaccataaacaccaccatccaggatgtg
aatcgctatctgctcaagagtggagggtcatccccaacatcatctcagaatgccacgctg
ccttcatcgagtgcctggccgcttagtgcctccggctacagtagctctttcagcagcatt
gcatctgcacctagcattgcaggtaaactgtcagacatcaagtccacgtggtcctctggc
ccaatctctcacacccaagcctctctgtcccacgaactctggaaggttcccagaaacact
acagctccaacaagacctcctccaggcttaaccaacaccaagccatcctccacgtggggt
gccagtcccctgggctggaccagctcttcttactcctctggttctgcatggagtactgac
agctcagggagaacaagcagctggctggttcttcggaacctcaccccccagatcgatggc
tccacactgcggacactgtgtttgcagcacggccctctcatcacattccacttgaacctg
acccaagggaatgctgtggtccgatacagttccaaggaggaagcagccaaggcccagaag
tctctgcacatgtgtgtgctgggcaacacgacgatcctggcggagtttgccggcgaggag
gaagtgaaccggttcctggcgcaggggcaggcgctgccgcccacctccagctggcagtcc
aacactggatccacccccagccgcctgggctcctcgggcagctcccacgggctggtgcgc
cccgacgccggccactggaaccccccgtgcctggggggcaagggcagcagcgacctgctc
tgggggggggtgccccagtactccagcagcctttggggaccccccagcgccgacgacggc
agagtcatcgggagccccacgcccctcaacaccctcctgccgggggatctgctcagcggg
gagtccatctag
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