Oenanthe melanoleuca (Eastern black-eared wheatear): 130260531
Help
Entry
130260531 CDS
T09236
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oma04990
]
130260531 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
oma04990
]
Other domain-containing proteins
Patched domain-containing proteins
130260531 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
130260531
NCBI-ProteinID:
XP_056362023
LinkDB
All DBs
Position
1:98737886..98776631
Genome browser
AA seq
914 aa
AA seq
DB search
MVLRGPWGSCGGPGAALALLRALRTRMLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVL
ISILLGASFSRYQVEESVEHLLAPTHSLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYG
RVIITSFRKANMLDQHHTDLILKLHSAVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIV
HVLEELKAARSSNRTNFAITYPITHLKDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYY
LQAINSLNDMVAEKWESIFCDTVELFQKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLIT
SLVLVVTLAILCCSMQDCVRSKPWLGLLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPF
VMLGHGLYGTFEMLSSWRKTREDQHVKERTAAVFADSMLSFSLTTAMYLVTFGIGASPFT
NIEAARIFCCNSCIAIFFNYLYVLSFYGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKP
AWYRFLLTARFSEDTDDSEETNTYESHLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISF
ALMGYLQVSEGSDLSNIVATATRTIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQED
VLEYTKGFVRISWFESYLNYLRKLNISTGLPKKNFTDMLRNSFLKTPQFAHFSEDIIFSK
KYNNEVDVVASRMFLVAKTMETKREELYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYAS
SVGAPLQNSCISALFLLFFSAFLVADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISV
LCLIYGINYTIDNCAPLLSTFVLGKEFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAA
VPSNLTRTLFRCLFLIALVTFFHCFAILPVILTFLPPSKKKRKEKKNPENREEIECVEMV
DMDSTRVVDQITTV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgcggggaccgtgggggagctgcgggggccccggcgcggcgctcgctctcctg
cgcgccctccgcactaggatgttgcggcaggtcttgcacagggggctggggacgtccttc
tcccggctcggccacttcgtcgccagccacccggtgttcttcgcttcggcgcccgtgctc
atctccatcctgctgggcgccagcttcagccgctaccaggtggaggagagcgtggagcac
ctcctggcccccacgcacagcttggccaagatcgagaggaacctggtggacagcctcttc
ccggtgaaccgctccaagcaccggctctactccgacctgcagacgcctgggaggtacggc
cgggtgatcatcacctccttccgcaaggccaacatgctggaccagcaccacaccgatctc
atcctcaagttgcactctgcagtgaccaggatccaagttcaaagacctggtttcaattac
acgtttgcccatatatgtatcctgaacaatgacaagacatgcatagtggacgacatagtg
catgtactggaggaattaaaggctgctcgttcttctaatcgaactaattttgcaatcact
tatccgattactcacttaaaggatggcagggaagtgtacaatgggcaccagctcggtggg
gttactgtgcacagcaaggaccgggtgaagtctgcagaagccattcagctcacctactac
ttgcaggcaatcaactccttgaatgacatggtggcagagaagtgggaatccattttttgt
gacactgttgaacttttccagaaatccaacaggaaagtcaaaatgtatcctttcacttcc
tcttcgctgaaggaggatttccagaagacgagcagggtgtcagaacgctacctgatcaca
agcttggtccttgtggtcaccttggccattctctgctgctccatgcaggattgtgtccgc
agcaaaccctggctgggcctgctgggattgctgacagtgacccttgccaccctgactgct
gctgggatcatcaatctcactggtgggaaatacaattccaccttcctgggaatccccttc
gtcatgttaggtcatgggttgtatgggacttttgaaatgttgtcctcctggagaaaaact
agagaagaccaacacgttaaagagaggactgcagctgtttttgcagactccatgctctcg
ttttctctcaccactgccatgtacctggtcacttttggaataggtgccagccccttcact
aacattgaagcagccagaattttctgctgcaattcctgtattgcaattttcttcaactac
ctctatgtactctccttttatggttccagcctggtgtttactggctacatagaaaacaac
taccagcatagtatcttctgcagaaaggtaccaaagccagaggtattgcaagagaagcct
gcatggtataggtttcttctgacagccagattcagcgaggacacggatgattcagaggaa
acgaacacttacgagagtcatctcctggtgtggttcctgaaacgctattattgtgactgg
ataacaaacacttatgtcaagccttttgtagttctcttttaccttgtttatatttccttt
gccttaatgggctacctgcaggtcagtgaggggtcagacctgagcaacatcgtagcgact
gcgactcggaccatcgagtacacgactgcccagcagaagtatttcagcaactacagcccg
gtcatcgggttctacatctacgagtccatcgagtactggaacaccagtgtccaggaggac
gtgctggagtataccaagggctttgtgaggatatcttggttcgaaagctacttaaattac
cttaggaaactcaacatatctactggattgccgaagaagaatttcactgatatgttgagg
aactccttcctgaagacccctcagtttgcccatttttcagaggatatcatcttttccaag
aagtacaacaatgaagttgatgttgtggcctccaggatgttcttggtggccaagacaatg
gaaaccaagagggaagaactttatgacctcctggagactctgaggaagctctctctcacc
tccaaggtgaaattcatagttttcaatccatcatttgtgtacatggatcgttatgcctct
tcagtgggagcccccttacaaaactcctgcattagtgctttatttctgctcttcttctct
gcattcctggtggcagactctctgatcaatgtgtggctcactctaactgttgcctcggtt
gaatttggagttataggttttatgaccttgtggaaagtggaactagattgtatttctgtg
ttgtgcttaatttacggaattaattatacaattgacaactgtgctccactgttgtcaacc
tttgtcctgggcaaagagttcacaagaactaaatgggtgaaaaatgccctggaagtgcat
ggggtagctattttgcagagctacctctgctatattgttggtctgattcctcttgcagct
gtgccttcaaatctgacccgtacactgttcaggtgcttgtttttaatagcattagtcacc
ttctttcactgctttgccattttacctgtgatactgactttcctgccaccctccaagaag
aagaggaaagagaagaagaatcctgaaaaccgtgaggaaatagagtgtgttgaaatggtg
gatatggatagcacccgagtggttgaccaaattacaacagtctaa
DBGET
integrated database retrieval system
