Oenanthe melanoleuca (Eastern black-eared wheatear): 130260574
Help
Entry
130260574 CDS
T09236
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130260574 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oma02000
]
130260574 (ABCA5)
Transporters [BR:
oma02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
130260574 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
RsgA_GTPase
AAA_29
AAA_16
AAA_23
MMR_HSR1
nSTAND3
Dynamin_N
ATP-synt_ab
Rad17
Motif
Other DBs
NCBI-GeneID:
130260574
NCBI-ProteinID:
XP_056362083
LinkDB
All DBs
Position
18:2270883..2308300
Genome browser
AA seq
1648 aa
AA seq
DB search
MAPAAPREAGVWRQTRALLFKNCLIKCRTKKSSVQEVLFPLFFLFWLILMSMMHPHRKFD
EVANTDLGPLDTSVLVNFVIGYTPPTALAREIMKKVAFDNFEDGLITEEYLSEEELEEAS
FLKPSNFVGVVFKDSMSYQLRFHDSIAMSSIYTESRATCSSLRKSCESVTYWSSGFTALQ
ACIDAAIIQLKTNHSVWEQLDLTRAMVMGEAAVVEIDNFPRAIILIYLVIAFSPFGYYLA
IHIVAEKERKLKEFLKILGLHDTAFWLSWVLLYVSLIFVMSILMAVIATASSLFPQSSAF
VIFLLFFLYGVSSVFFALMLTPLFKKSKHVGIVEFLATLVFGFVGLNIVLLEDFPKSFVW
ILSPLCQCSFLIGVAQVMHLEDYEDGATFANINAGPYPLCISLILLVLDSIFYLLVAVYL
DQVIPGEFGLRRTPFFFMKPSFWSKHRKNYKELYESSINGSLSFSEIVEPVPAEFQGKEA
IRISCVQKTFRKKGETVEALRNLSFDIYEGQITALLGHSGTGKTTLMNILCGLCPPSDGF
VSVYGHRVSEIEEMLEVRQIAGVCPQADIHFDILTVEENLSIFAAIKGIPQNDLIQEVQK
VLLDLEMQPIRDNQAKKLSGGQKRRLSVGVAVLGNPKVLLLDEPTAGMDPCSRHIVWNLL
RSRKATGVTVFSTHFMDEADILADRKAVISQGMLKCLGSSLFLKSKWGIGYRLSMHIDAY
CHTEATTALIRQHVPSAGLLQHNPEQLVYSLPLRDMDKFPGLFSDLDTHSHLGVITYGVS
MTTLEDVYLKLEVEAEIDQADYSVFHSQQAQDEMDTKSLDDMEQSLLVLSEAKAPAMSNS
ALWKKQVSTIAKVHFLSLKRENKCVRVMLLLFLIFLVVQILLFFIHHIIKNAVAAIRLSP
DLYLLKPGESSHKYRSRLLLQNSTESDISDIVHSLGSMNILWEMFNDSDYVSVAPHSAAL
NVFALEARQNYVFNIIFNSTMVHSLPVLMNIVSNLLLRSLNVTESIQIWSNPLIQDLPDT
IFRLEIYFEAVLLGIIITGMPPYFAMDNAENHKIKAYTQLKIAGLYPSAYWTGQAVVDLP
LFFFILTLMIGSLFAFHYGVYFYVGKFMAVIFCLIGYVPSVVLFTYVVSFTFRKVQNTKE
FWSFIFSVTALLCTVVTEVSFFLDHYLVTTVLHYIFSIFIPIYPLIGCLICFIKVSWKGK
SESGGYHDPWDRLLVAVLAPYLQCVVWLLLLRCFELKNGGRTVREDPFFRKCFSKAKPWK
FPDVPHEENEDEDVKAERLRVKEILSSPRGQEMPAILVSSLHKEFDERKEFLLGRKIKKV
ATKHVSLCVKKGEILGLLGPNGAGKSTLINMLVGEIEPTSGQVLMGDDSLGLSSEDDSVK
FVGYCPQTNPLWPDITLQEHFEIYGAIKGMSQSDVKEVIKRISSVLDLKDHLQKTTKKLG
MGLKRKLCFALSMLGNPRVTLLDEPSTGMDPKAKQHMWRAIRAAFKNKERAAILTTHYME
EADAVCDRVAILVSGQLRCIGTVQHLKSKFGRGYFLEMKLREAADVQQVEYLQSQILHIF
PNASRQDSFASILAYKIPKEDVQSLSHSFSKLEEVKHAFNIEDYSFSQATLEQVFVELAK
EQEEEESSFGTLNSSLWWERTQEDRVIF
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagctgctccaagagaagcaggagtgtggaggcaaacccgagctctgttgttc
aagaattgtctcattaagtgcaggactaagaaaagcagtgtccaggaagtgcttttccca
ctgtttttcctgttctggctgatcctgatgagcatgatgcaccctcacaggaaatttgat
gaggtggccaacacagacctgggccccctggacacctcagtgctggtgaattttgtcatt
ggctacaccccccccacggccttggctcgggaaatcatgaagaaagtggcttttgataac
tttgaggatgggcttatcacagaggaatatttgagtgaggaggagctggaagaagcaagt
tttctcaaaccctccaactttgtgggggtggtgttcaaggattccatgtcctaccagctg
aggttccacgactccattgccatgtcctccatctatacagaatccagagccacctgctcc
agcctgaggaagagctgtgagtctgtgacctactggagctcagggttcacagcactgcag
gcctgcattgatgctgccatcatccagctgaaaacaaaccattctgtttgggaacagctg
gatctgaccagagccatggtgatgggagaggctgcagtggtggaaattgataatttccct
cgtgcaatcattttaatttacctggtgattgcattctctccctttgggtattatttggca
attcacatcgtggcagaaaaggagaggaagctgaaggagttcttgaaaattttgggactc
catgacactgccttctggctgtcctgggtgctgctctacgtgagcctgatttttgtcatg
tccatcctcatggcagtgattgccacagcctcgtccctcttcccccagagcagtgccttt
gtcatattcctccttttcttcctctatggagtctcctcagttttctttgccctgatgctg
actcctctgtttaagaaatccaagcacgtggggattgtggagttcctggcaactctggtt
tttggctttgtgggtctcaacattgtcctgctggaggatttccccaaatccttcgtgtgg
atcctcagccctttgtgtcagtgcagcttcctgattggtgttgcacaggtcatgcatctg
gaggattatgaagatggggcaacatttgcaaacatcaatgctggtccttaccctctgtgt
atctctctgattctcctggtgctggacagcatcttctacctgcttgtagctgtctacctt
gaccaggtgatcccaggggagtttgggctgcggcgcacgcccttcttcttcatgaagccc
tccttctggtcaaagcacaggaaaaactacaaggagctctatgagagcagcatcaatggc
agcctgagcttcagtgagattgtggagcctgtgcctgcagagttccagggcaaggaggcc
atcaggatcagctgtgttcagaaaacattcaggaaaaagggagaaaccgtggaggctctg
agaaatttgtcctttgacatctacgaggggcagatcacggcgctgctggggcacagtggc
accggcaagacgacgctgatgaacatcctgtgcgggctgtgccctccctctgacgggttt
gtgtctgtctacgggcacagagtgtctgagatcgaggagatgctggaggtgcggcagatc
gcgggggtgtgtccccaggccgacatccacttcgacatcctgactgtggaggagaacctc
tccatctttgctgccatcaagggcatcccccagaacgatttgatacaggaggtgcagaag
gtgttgctggatttggagatgcagcccatcagggacaatcaagccaaaaaactgagtggg
gggcagaagaggaggctgtcagtgggagttgctgttcttgggaaccccaaggttctgctg
ctggacgagcccacggcggggatggatccctgctcgcgccacatcgtctggaacctgctg
agaagcaggaaagccacgggagtgaccgtgttcagcacccacttcatggacgaggctgac
atcctggcagatcgcaaagctgtgatttcccaggggatgctcaagtgcctcggctcctcc
ctgttcctcaagagcaagtggggcattggctaccgcctcagcatgcacatcgatgcctac
tgccacacggaggccaccacggcgctgatccggcagcacgtgccctcggccggcctgctg
cagcacaaccccgagcagctggtctacagcctgcccctcagggacatggacaagttccca
ggtttgttctctgacctggacacccattcccacctgggggtcatcacctatggggtgtcc
atgaccacgctggaggacgtgtacctgaagctggaagtggaggcagagattgatcaagca
gattacagcgtgttccactcccagcaagctcaggatgagatggacaccaaatccctggat
gacatggagcagagcctgctggtgctgtctgaggccaaggcaccagccatgagcaactca
gccctgtggaagaagcaggtttccaccatagccaaagtgcatttcctcagtctgaaacgg
gagaacaagtgtgtcagagttatgttgttgcttttcctcattttccttgtagttcagatt
ttgttgtttttcatacatcacatcatcaaaaatgctgtggctgccatcagactctcccca
gatctgtacctgctgaagcctggggagagctctcacaagtacaggagtcggctgctgctg
cagaactccacagagtcggatatcagtgacattgtgcactccctggggagcatgaacatc
ctctgggagatgttcaatgacagtgattatgtctcagtggcacctcacagtgcagctctc
aacgtgtttgccctcgaggccaggcagaattatgttttcaacatcatattcaacagcacc
atggtgcattccctgccagttctgatgaatattgtcagcaacctcctgctgcgcagcctg
aacgtgactgagagcatccagatctggagcaaccccttgattcaggatcttccagacaca
attttcaggctggagatctattttgaagctgtgttactgggaatcatcatcactgggatg
ccaccctactttgccatggacaatgcagaaaaccataagatcaaggcttacacccagctg
aagattgcagggctctacccctcagcttactggactggccaggctgtggtggatctgcct
ctgttcttcttcatcctcaccctgatgattggcagcctctttgccttccactatggtgtt
tatttctacgtgggcaagttcatggctgtgattttttgcctgattggttacgtcccctct
gtcgtgctcttcacctacgtggtctccttcaccttcagaaaagtccagaacacaaaggag
ttctggtcatttatattttcagtgacagccttgctctgcacagttgtcactgaagtgtct
tttttcctggaccattacctggtaaccacggtcctgcattatatcttctccatcttcatt
cctatttatcctcttattggctgcctgatctgttttataaaggtctcatggaaaggcaag
agtgagagtggaggataccatgacccctgggacaggctgctggtggcagttctggctccc
tacctgcagtgtgtggtgtggctgctcctgctgcgctgcttcgagctgaagaacggaggg
aggacggtgagagaagatcccttcttcaggaaatgttttagcaaagccaagccctggaag
ttcccagatgtgccccacgaggagaacgaggacgaggacgtgaaggcagagaggctgcgg
gtcaaggagatcctgagcagccccaggggccaggagatgccagcaatcctggtcagcagc
ctgcacaaggagtttgatgaaaggaaggaatttcttctggggaggaaaataaagaaggtg
gccaccaaacatgtttccctctgtgtgaagaaaggagaaatcctaggtttgttgggaccc
aatggagctgggaaaagcacattaattaatatgcttgttggagagattgagccaaccagt
ggacaggttctgatgggagatgactccttggggctgagcagtgaggatgactctgtgaaa
ttcgtggggtactgtcctcaaacaaaccctctctggccagacatcacactgcaggagcac
tttgagatctatggtgctatcaaaggcatgagccagtctgatgttaaagaagtcatcaag
cgcatctccagtgtgctggatctgaaggaccacctgcagaagacgaccaagaagttggga
atggggctgaaacgcaagctctgctttgccctcagcatgctgggcaacccccgggtcacg
ctgctggacgagccctccaccgggatggaccccaaagccaagcagcacatgtggcgggca
atccgagcagccttcaagaacaaggagagagcagcaatcctcaccacacactacatggag
gaggcagatgctgtgtgtgaccgtgtggccatcctggtgtcagggcagctcaggtgtata
ggtactgtccaacacctgaagagcaagtttggcagaggatacttcttggaaatgaaacta
agggaagcagcagatgtgcagcaggtggagtatctgcagagccagattctgcacatcttc
cccaacgccagccgccaggacagttttgcttctatcttggcatataaaattcctaaagaa
gatgtgcagtcgctttcacattctttttccaagctggaagaagtaaaacacgccttcaac
attgaggactacagcttttctcaagcaacactggagcaggtgtttgtggaactggctaaa
gagcaggaggaggaggagagcagctttggcaccctgaacagcagcctgtggtgggagagg
acacaggaggacagagtcatcttctga
DBGET
integrated database retrieval system
