Oenanthe melanoleuca (Eastern black-eared wheatear): 130260640
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Entry
130260640 CDS
T09236
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130260640 (TMC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oma02000
]
130260640 (TMC6)
03037 Cilium and associated proteins [BR:
oma03037
]
130260640 (TMC6)
Transporters [BR:
oma02000
]
Other transporters
Pores ion channels [TC:
1
]
130260640 (TMC6)
Cilium and associated proteins [BR:
oma03037
]
Other cilia and associated proteins
Stereociliary proteins
130260640 (TMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
130260640
NCBI-ProteinID:
XP_056362223
LinkDB
All DBs
Position
18:complement(324892..331705)
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AA seq
799 aa
AA seq
DB search
MSQPPSITLHVPEGTESDGQELSPDNERALHTSFHQLILEQSSLIEAGLELELQERSRES
PACLAARDACAVAWPEPGQGEEHPSYASASLQILASMPSRTIGRSLGAIISQYCNRTARL
RRRSSRPPLQQLCRAARPSLRQYGLDTDPAGATLQEKRRLLVKELLSLSPSQCSHMLLTM
PLCLAEKRILRRQLSRQRGPLGQRAQHWAPCSPCGWPKVCVVLGCRGLWYRLLSLLRTAQ
PWHYALKQIGGRFGSSVLSYFLFLKTLLMLNFFSFFILLAFVVVVQAAYPSAPASPQPFT
GLELLTGAGSFTHSLLYYGYYSNVTLNDPCSSSPKGSQCPLASPRLPYNLPLAYLFSVGV
SFLVTCILLVYSVSRSFRESVGSSTGVLAIKVFCAWDFKVMQKRSVKLQCQNICTQLKEL
LVEQRCRSRSQSRLQCLGRCLVVLLAWLLALGSALGCVLALHHFSEHMHTVQQELQAQGS
DRWQQEAVLLVLPLVVSILNALMPHLYNLLAMWEKQDSPVTQVSVAIVRNLILKTMVVIL
LCYRWVSRSVICSTEECWETCVGQDLYRFMMMDFIFTLLDTLFGELIWRLILEKRLKTKQ
RPEFDIARNVLELMYGQTLTWLGILFAPLLPAVQMLKLLLLFYIKKTSLMRNCQSPSKPW
HASRMSTVFITLLCFPSFLGAAAFLSYTIWSVQPSETCGPFRGLETIYKSGKRWVLVLEK
SNPNITWFAWVYQHLLENACLQFFMSVALIAVIYFNIQVVRGRQRVICLLQEQIANEGED
KMFLIQKLHSVYGQRHRRS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccgccctccatcaccctgcacgtccccgagggcaccgagagcgatggccag
gagctcagcccggacaacgagagagccctgcacacctcattccaccagctcatcctggag
cagagcagcttgatcgaggcaggtctggagctagagttgcaggagaggagcagagagtcc
ccagcctgcttggctgctcgagatgcctgtgcagtggcctggccagagcccgggcaaggt
gaggagcaccccagctacgcctcggcctccctgcagatcttggccagcatgcccagccgc
accatcggacgcagcctcggggccatcatctcccagtactgcaaccgcacggcgcggctg
cggcgccgcagcagccgccctcccctgcagcagctgtgccgcgcggcacggcccagcctg
cgccagtacggcctggacaccgaccctgccggcgccacgctgcaagagaagcggcgcctg
ctggtgaaggagctgctgagcctctcgcccagccagtgcagccacatgctgctcaccatg
cccctctgcctggcggagaaacgcatcctgcggcggcagctgagcaggcagaggggcccc
ctggggcagcgtgcccagcactgggccccctgctcaccctgtggctggcccaaggtctgc
gttgtcctcggctgccgaggtctctggtacaggctcctgtccctgctccgcactgcgcag
ccctggcactatgccctgaagcagattggtggccgctttggctccagtgtcctctcctac
ttcctcttcctcaagacactccttatgttgaacttcttttccttcttcatcctcctggcc
ttcgtggtggttgtgcaggctgcgtacccctctgcaccagccagcccccagcccttcact
ggcctggagctgctcacaggagcgggctccttcacgcactcgctgctgtactacggctac
tacagcaacgtgaccctaaacgacccctgcagctccagccctaagggcagccagtgcccc
ctcgcatcccctcgcctcccctacaacttgccactggcttacctgttcagtgttggggtc
tccttccttgtcacctgcatcctgttggtgtacagtgtgtcccgctcttttcgggagagc
gtgggaagctccacgggggtcttggccatcaaagtcttttgtgcctgggacttcaaggtg
atgcagaagcgctcggtgaagctgcagtgccagaacatctgcacccagctgaaggagctg
ctggtggagcagcgctgccgctcccgctcccagagccgcctccagtgcctgggccgctgc
ctggtggtgctgctggcctggctgctggctctgggctcagccttgggctgcgtgctggct
ctgcaccacttctcggagcacatgcacacggttcagcaggagctacaggcgcagggcagt
gacaggtggcagcaagaagccgttctgctggtcctgccccttgtggtgtccatcctcaat
gccttgatgccccacctgtacaacctgctggccatgtgggagaagcaggactccccagtg
acacaggtctccgtggcaatcgtcaggaacctcatcctgaagacaatggttgtcatcctg
ctgtgctaccggtgggtcagccggagcgttatctgctcgacagaggagtgctgggagacg
tgtgtggggcaggacttgtatcgcttcatgatgatggatttcatattcaccttgctggat
acactctttggggagctgatctggaggctaatcctggagaagaggctgaagacaaagcag
aggccagagtttgatatcgcccgaaacgtgctggagctgatgtatgggcagaccctgacc
tggctgggcattctcttcgctccactcctgccagctgtgcagatgctgaagctgctgctg
ctcttctatatcaaaaagaccagcctgatgcggaactgccagtcccccagcaagccctgg
cacgcgtcacgcatgagcaccgtgttcatcaccctgctgtgcttcccctccttcctgggt
gccgctgccttcctctcctacaccatctggtcggtgcagccatcagaaacctgcggtccc
ttccgggggctggaaaccatctacaagtcagggaagaggtgggtgctcgtgctggagaag
tccaaccccaacatcacctggtttgcctgggtctaccagcatctcttggagaatgcctgc
ctccagttcttcatgtctgtggccctgatagctgtgatctacttcaacatccaggtggta
agaggccgccagagggtcatctgcctgctgcaggagcagattgccaacgaaggggaagat
aagatgtttctcatccagaagcttcactctgtttacgggcagagacacagacgttcctga
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