Oenanthe melanoleuca (Eastern black-eared wheatear): 130260763
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Entry
130260763 CDS
T09236
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130260763 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oma03041
]
130260763 (PRPF8)
Spliceosome [BR:
oma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
130260763 (PRPF8)
Complex C
U5 SnRNP specific factors
130260763 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
130260763
NCBI-ProteinID:
XP_056362425
LinkDB
All DBs
Position
19:4691704..4709826
Genome browser
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPNPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcttcccgtaccgcggcggctgcgccccggtgcccaacccgctggcgccg
ctgcccgactacatgtccgaggagaagctgcaggagaaagcccgtaaatggcagcagctg
caggccaagcgctatgcggagaagaggaaattcggcttcgtggacgcgcagaaggaggac
atgccccccgagcatgtccgcaaaatcatccgcgaccacggtgacatgaccaataggaag
ttccgacacgacaagcgcgtctacctgggagctctgaagtacatgccccatgctgtgctg
aagctgctggagaacatgcccatgccctgggagcagatccgagatgttcccgtcctgtac
cacatcaccggcgccatctcctttgtcaacgagatcccctgggtcattgagcctgtctac
attgcccagtggggctccatgtggattatgatgaggcgggagaagagggacaggcgtcac
ttcaagaggatgagattccccccgtttgatgatgaagaaccccctctggattatgctgat
aacatcctggatgtggagcccctggaagccattcagctggagctggacccagaggaggat
gcccctgtgctggactggttctatgatcaccagcctctgaaggacaacaggaagtatgtc
aatggctccacgtaccagcgctggcagttcaccctccccatgatgtccaccctgtaccgc
ctggccaaccagctgctcactgacctggtggatgacaactacttctacctgtttgacctg
aaggcattcttcacctccaaggcactgaacatggccattcctggaggtcccaagtttgag
ccccttgtcagagacatcaatcttcaggatgaagactggaatgaatttaatgacatcaac
aaaatcatcatcaggcagcccatcaggacagagtacaaaatcgctttcccgtacctgtac
aacaacctgccacaccatgtccacctcacctggtatcatactccaaacgttgttttcatt
aaaacagaagatcctgacctcccagctttttactttgatcctctgatcaatcccatttca
cacagacattctgtcaagagccaggagccactgcctgatgatgatgaagagtttgagttg
ccagagtttgtggagcctttcctgaaggatacccctctctacactgataacacagccaat
ggcattgccctgctgtgggccccacgacccttcaacttgaggtctggcaggacccggaga
gctcttgacatcccactggtcaagaactggtaccgtgagcactgcccagcaggacagcca
gtcaaggtgagagtctcctaccagaagctcctgaaatactatgtcctgaatgcactcaaa
cacagacctcccaaggcccagaagaagaggtacctgttccgctccttcaaggctaccaag
tttttccagtccaccaagctggactgggtggaagttggcctgcaagtgtgtcgccagggc
tacaacatgctgaacttgctgatccacagaaagaatctgaattaccttcacttggattac
aacttcaacctgaagcctgtgaagaccctcaccacaaaggaaagaaaaaagtcccgtttt
gggaatgctttccatctgtgccgagaggtcctgcggctgactaagctggtggtggacagc
cacgtccagtacagactgggaaatgtggatgcattccagttggcagatggcctgcagtac
atctttgcccacgtgggtcagctcacagggatgtaccggtacaaatacaaactgatgagg
caaattcggatgtgcaaggatctgaaacatctcatctactacaggtttaacacagggcct
gtgggcaaaggtcctggctgtggtttctgggctccaggctggagagtgtggctgttcttc
atgaggggcatcaccccattgctggaacgctggctgggaaatctgctggccaggcagttt
gaaggccgtcactcgaagggcgtcgcaaagactgtcaccaagcagcgtgtggagtctcac
tttgacctggagctcagggcagctgtgatgcacgacatcctggacatgatgccagagggg
atcaagcagaacaaggccagaaccatcctgcagcacctgagcgaggcttggcggtgctgg
aaggccaacattccctggaaggtgccagggctgccaactcctattgagaacatgatcctg
aggtacgtgaaggccaaagctgactggtggacaaacacagctcactacaaccgggagcgg
atccgccgcggagccactgtcgacaaaaccgtctgtaagaagaacctgggcaggctgacc
agactctacctgaaagctgagcaggaacggcagcataactacctgaaggatgggccttac
atcactgcagaagaggctgttgctgtgtacacaaccacagtgcactggctggagagcagg
aggttctcccctattcccttccccccactgtcctacaagcatgacaccaagctgctgatc
ttagccctggagaggctgaaggaagcttacagtgtgaaatcacgcctgaatcagtcacag
agagaggagctgggcttgattgagcaggcttatgataatccccacgaagctctgtccaga
atcaagcgacatctgttgactcagagagctttcaaagaggtgggaattgagttcatggat
ctctacagccacttggtccctgtttatgatgttgagcccctggagaagatcacagatgct
tatctggatcagtacttgtggtatgaggctgataagcgaaggcttttccctccttggatc
aaacctgctgacactgaaccacccccactgctggtgtacaagtggtgccaaggcattaat
aacctgcaggatgtttgggaaacgagtgaaggtgaatgtaacgtgatgctggagtctcgg
tttgagaagatgtatgagaagattgacctgaccttgctcaacaggctgctgcgtctcatc
gttgatcacaacattgctgactacatgacagccaagaacaacgtggtgatcaactacaag
gacatgaatcacacaaactcctatgggattattcgtgggctgcagtttgcctccttcatt
gtccagtactatgggcttgtgatggacctgctggtgctgggcctgcacagggccagtgag
atggctgggcctccccagatgccaaatgacttcctcagcttccaggacattgccacggag
gtggcccatcccattcgcctcttctgcagatacattgacaggattcacattttcttcagg
tttacagctgatgaggcaagagatctgatccagaggtacctgacagagcacccagacccc
aacaacgagaacattgtgggctacaacaacaagaagtgctggccccgggacgctcgcatg
cgcctcatgaagcacgacgtgaaccttggccgtgctgtgttctgggacatcaagaaccgc
ctgccccgctcggtgaccacggtgcagtgggagaacagcttcgtgtccgtgtacagcaag
gacaaccccaacctgctgttcaacatgtgcggcttcgagtgccgcatcctgcccaagtgc
cgcaccagctacgaggagttcacccacaaggacggcgtctggaacctgcagaacgaggtc
accaaggagcgcacggctcagtgcttcctgcgtgtggacgatgagtctatgcagaggttt
cacaacagagtgaggcagatcctcatggcctctggctccacaaccttcactaagattgtc
aataaatggaacacagctctgattggcctgatgacttatttccgggaagctgttgtgaat
actcaggagctgcttgatttactggtgaagtgtgagaataaaatccagactcggatcaag
atcggcctgaattccaaaatgcccagccgttttcctcctgtggtgttctacacccctaag
gagctggggggcctgggcatgctctccatgggccatgttctcatccctcagtctgacctg
aggtggtccaagcagacagatgttggcatcactcacttccgctcaggaatgagtcacgag
gaggaccagctcatcccaaatctgtatcgttacatccagccctgggagagcgaattcatt
gactctcagagggtgtgggcagagtatgccctgaaacgacaggaggctatagcccagaac
aggcgtctgacactggaggatctggaggactcatgggacaggggaattcctcggattaac
acccttttccagaaggacaggcatactctggcttatgataaaggatggagagtcaggact
gacttcaaacagtatcaggtgctgaagcagaacccgttctggtggacgcaccagcggcac
gacggcaaactctggaacctgaacaattaccgcacggacatgatccaggccctgggcggg
gtggaagggatcctggagcacacactcttcaagggcacctacttccccacgtgggagggt
ctcttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaat
gcccagagatcgggtttgaaccaaattccaaacagaagattcactctctggtggtctcct
accattaacagagccaatgtatatgttgggttccaggtgcagctggatttgacagggatc
ttcatgcatggcaagatccccacactgaagatttccctcatccagattttccgagctcac
ttgtggcagaagatccacgagagcattgtcatggatttgtgtcaggtgtttgatcaagag
ctcgatgctctggagattgagacagtgcagaaagagacaatccatcccaggaagtcctac
aagatgaattcctcatgtgcagatatccttctctttgcttcctacaagtggaatgtgtca
cgtccatccttgctggcagattccaaggatgtgatggacagcaccaccacccagaagtac
tggattgacatccagctgcgctggggcgactacgactcccacgacatcgagcgctacgcg
agggccaagttcctggactacaccacagacaacatgagcatctacccctctcccactggg
gtgctcattgccattgatctggcctacaacttgcacagtgcttatgggaactggttccct
gggagcaaacctctgatccagcaggccatggccaaaatcatgaaagcaaaccctgccctg
tatgtgttgagggaacgaatccgcaaagggctgcagctctactcctcagagcccacagag
ccctacctgtcctcccagaactatggggagctcttctccaaccagatcatctggtttgtg
gatgacaccaatgtgtacagagtcaccatccacaagacttttgaagggaatttgaccaca
aaacccatcaatggagccattttcatcttcaatcccagaactggacagctcttcctgaag
atcatccacacatctgtgtgggcaggacagaagcgtctgggacagctggccaagtggaag
actgctgaagaggtggctgctttgatccgatccctccctgtggaggagcagccaaagcag
atcatagtgacaaggaagggcatgctggacccacttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctcggagttgcagctacccttccaggcctgtctgaaagtggag
aagtttggtgatctcatcctgaaggccactgaaccccagatggttctcttcaatctctat
gatgactggctgaaaaccatctcttcctacacagcattctcccgtctgatcctgattctc
cgggcactacacgtgaataacgatcgagccaaagttatcctgaagccagacaagacaacc
atcactgagcctcaccacatctggccaaccctgacagatgaggagtggatcaaggtggag
gtgcagctgaaggatctcatccttgctgactatggcaagaagaacaacgtgaacgttgca
tccctgacccagtcagagatccgagacatcatcctgggcatggagatctctgccccatcc
cagcagaggcagcagattgcagaaattgagaagcaaaccaaggagcagtcgcagctgaca
gccacacagacccgcacggtgaacaaacacggggatgaaatcatcacctccaccaccagc
aactacgaaacacagaccttctcctccaagactgaatggagggtcagagcaatttctgct
gccaacctccacctgcggacaaaccacatctatgtctcatcagatgacataaaggagaca
ggttacacctacattcttcccaaaaatgtgttgaagaagttcatctgcatctcagacctg
cgggcccagattgcaggttacctgtatggagtgagccctccagacaacccccaggtgaag
gagatccggtgcattgtgatggtgccccagtgggggacacaccagaccgtgcacctgcca
gggcagctgccacagcatgagtatctcaaggaaatggaacctctgggatggattcacacc
caacccaatgagtcccctcagctctcaccacaggatgtcaccacccacgccaaggtcatg
gctgacaacccctcctgggatggggagaagaccatcatcatcacctgcagtttcacccct
ggctcctgcacactgacagcctacaaactgacccccagtgggtacgagtggggccggcag
aacacggacaaaggcaacaatcccaagggttacctcccctcccactacgagagggtgcag
atgctcctgtccgaccgcttcctcggcttcttcatggtccctgcacagggctcctggaac
tacaacttcatgggtgtccgccacgaccccaacatgaagtacgagctgcagctcgccaac
cccaaggagttttaccacgaggtccatcgcccctcgcacttcctcaacttcgcgctgctg
caggagggggaggtttactctgccgaccgcgaggatctctacgcctaa
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integrated database retrieval system
