Oenanthe melanoleuca (Eastern black-eared wheatear): 130260767
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Entry
130260767 CDS
T09236
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130260767 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130260767 (SCARF1)
Membrane trafficking [BR:
oma04131
]
Endocytosis
Phagocytosis
Scavenger receptors
130260767 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
LeuA_dimer
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
130260767
NCBI-ProteinID:
XP_056362429
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All DBs
Position
19:4714716..4721174
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AA seq
965 aa
AA seq
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MPLSVVGWQPGPKIAQAAAAAAAAFPAPSPRRTPDVWIGRLLPRFLRKKPKAGGRKRPQH
GRDGTEGQSDRGTEGHQRGAGEPPGLGPWCPAGMESARPILCLQLWLWVQSSAQELDPEG
RNVCRFPAGPGCCPGWKQDGRACTVAVCEGEDACREGEVCVKPGLCRCPPGFFGADCSSR
CPEQYWGHDCKRSCPCHPNGRCDPVSGHCTCDPNHWGGLCQFPCQCGPHGRCDPLTGACH
CEPGWWAPSCRKQCQCSPSTSHCDPLSGLCRCLPGWWGRRCSFKCSCNVSPCAQETGKCE
CLAGYWGPACQRRCDCGHGSCSPVTGHCACEPGYQGRSCRDPCPAGKYGSQCVNSCGSCK
RSQPCSPVDGFCLACQPGWNGTLCKDPCAPGFHGEGCLQPCPRCQHGEPCDPQTGFCLRC
DPGWTGPSCNSSCPVGTFGDGCQFLCPECVSGSCDPVTGVCICQAGYWGDSCNDTCPEGY
FGVNCSSPCQCSRGTCDPVQGDCVLSLKDHGALAAAILVPLLLLLLCVACCCCGAGSADA
RDRAAVPDDDVVARMKHHVQGVLANLSALVPCFNLGASKLPKVTVSHHDMEIPYNPSFIE
PPSSAWVSDSSFSSFDTDNEGPEYSVPPREGIPLLGGAELQDGASRPGEALPDPSAFDSE
DVSQPFAIPRTSSIAKAKRPSVSFAEGTKFGAAETPSPSRKPKAPWGPSRLTPPPGDAAG
EPHGERPASDCYENAEPLSKGDESHRPSPRATPGGRRRVVSSTRHVAQRVEALEAAAKSG
SWEAKGKEPDVTTIYMVVGTAGEDTKAEGTGEGPVQAVLKRLGSLQKGKWAAKEEPKVRR
SMEAIQKPPRRALAQRRDSENSCKQRESVPGAPAESAPGKLQHPAAKRLSLLLASLSSKN
TGAQDGPSETVGATEKGKSPELVGSLERKGQAAAEEEPKYENVSSGGADAPSGPGKELLA
TPPAT
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcccctttctgtggtagggtggcagccagggccaaaaatagcccaggcggcagcagca
gcagcagcagcattccctgctccctctccccgccgcacccctgacgtctggatcgggcgc
ctcctcccgcgtttcctcaggaagaaacccaaggctggagggaggaagaggccgcagcac
gggcgggacgggacagagggacagagtgacagagggacagagggacaccagcgtggggct
ggggagccaccaggactggggccctggtgccctgctgggatggagagcgcccggcccatc
ctctgcctccagctgtggctgtgggtgcagagctctgcccaggagctcgaccccgagggc
aggaacgtctgcaggttcccggccggccccggctgctgtcccggctggaagcaggacggg
agggcgtgcacggtcgccgtgtgcgaaggggaggacgcctgcagggagggcgaggtgtgc
gtgaaacccgggctgtgccgctgcccacccggcttcttcggagcggactgcagctcccgc
tgccccgagcagtactggggccacgactgcaagcggagctgcccgtgccaccccaacggg
cgctgcgaccccgtgagcggccactgcacctgcgaccccaaccactggggagggctgtgc
cagttcccctgccagtgcggcccccacggccgctgtgaccccctgaccggcgcctgccac
tgcgagccgggctggtgggcgcccagctgcaggaaacagtgccagtgcagcccctccacc
tcgcactgcgaccccctgagcgggctgtgccgctgcctgccgggctggtggggcaggagg
tgcagcttcaagtgctcctgcaacgtctcgccctgcgcgcaggagacgggcaagtgcgag
tgcctggctggctactggggaccggcgtgccagcggcgctgcgactgcgggcacggctcc
tgcagtcccgtcaccggccactgcgcctgcgagccgggctaccagggcaggagctgccgg
gacccctgtccggcagggaaatacggatctcagtgcgttaacagctgtgggagctgcaag
cgcagccagccctgctcgcccgtggatggtttctgcctggcctgccagcctggctggaac
gggaccctctgcaaggatccctgtgctcctggattccatggcgagggctgcctccagccg
tgtccccgctgccagcacggggagccctgtgacccccagaccgggttctgcctgcgctgt
gatcccggctggacggggcccagctgcaacagctcctgccccgtgggcacctttggtgat
ggctgccagttcctctgccctgagtgtgtttcggggagctgtgaccccgtgacaggagtt
tgtatctgccaggcaggctactggggagacagctgcaatgacacctgtcctgaggggtat
tttggagtgaattgttcctcaccctgccagtgctcccgggggacctgcgaccctgtgcag
ggtgactgtgtgctgagtttgaaggaccatggagcccttgcagctgccatccttgttcct
ctcctgctgctgctgctctgtgtcgcctgctgctgctgtggtgctggctcagcagatgcc
agagacagggcggctgtgcctgatgatgatgtggtggccaggatgaagcaccacgtgcag
ggggtgctggccaacctcagtgctcttgtgccctgctttaacctgggtgcctcaaaactt
cccaaagtcacagtttcccatcacgacatggaaatcccctacaatcccagcttcatcgag
ccaccatcctctgcatgggtttcagacagctccttctcctccttcgacaccgacaacgag
ggacccgagtactccgtccctcccagagaaggcatcccgctgctgggcggggcagagctg
caggatggagcatcccgccctggcgaggcgctcccggacccgtccgccttcgactccgag
gatgtctcgcagcccttcgccatcccccgcacctccagcatcgccaaggccaagcgaccc
tccgtgtccttcgccgaggggacaaaattcggggcggccgagacccccagccccagcagg
aagcccaaggctccgtggggcccgtccaggctgaccccaccgccgggggatgcggcgggc
gagccccacggcgagcgcccggccagcgattgctacgagaacgccgagcccctcagcaaa
ggggacgaaagccaccggccatcgcctcgggccaccccggggggacggcgcagggtggtg
tccagcaccaggcatgtggcccagagggtggaggcgctggaagcagctgcgaaatccggc
agctgggaggcgaaggggaaggaacccgatgtcacaaccatctacatggtggtgggaacg
gccggggaggacaccaaggcggaggggactggcgagggaccggtgcaggctgtgctgaag
cgtctgggcagcttgcagaagggcaagtgggctgcgaaggaggagcccaaggtgaggagg
agcatggaggccattcagaaacctcctcggagggccctggcacagcgcagggactcggag
aacagctgcaagcagagggagagtgtgcccggagctcctgccgagtcagcccccggcaag
ctccagcatcccgccgcaaagagactgtccctcctcctcgcgtctctctcgtcaaaaaac
accggtgcccaggacgggcccagcgaaaccgtaggtgccacagagaagggcaaaagcccg
gagttagttggtagcctcgaaaggaagggacaggctgctgcggaggaagagccgaaatac
gagaacgtgtccagcggcggggctgatgcgccctccggccccggcaaagagctgctggcc
acccctccggccacctga
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