KEGG   Oenanthe melanoleuca (Eastern black-eared wheatear): 130260806
Entry
130260806         CDS       T09236                                 
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1 isoform X1
  KO
K14855  ribosome assembly protein 4
Organism
oma  Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:oma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oma03009]
    130260806 (NLE1)
Ribosome biogenesis [BR:oma03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    130260806 (NLE1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_Aladin ANAPC4_WD40 Beta-prop_SCAP WDR90_beta-prop_4th DSE1_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st ASA1 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st NLE NBCH_WD40 CFAP251_N WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_VPS8 PAC11 Beta-prop_DCAF12 Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Tricorn_2nd Beta-prop_HPS5 TRM82_WD eIF2A Ge1_WD40 WD40_RFWD3 RMC1_N PD40 Beta-prop_WDR75_2nd Beta-prop_NWD2_C FAD_binding_9 Cytochrom_D1 PALB2_WD40
Other DBs
NCBI-GeneID: 130260806
NCBI-ProteinID: XP_056362494
LinkDB
Position
19:complement(3166468..3174367)
AA seq 576 aa
MAAVSGTGAGMGIATDGRGSTWELRGASAAALRGVLALPWGSPARLLLGAGCLSLPRALL
RVPPRRSPLPGRVSLPGRGLCPLPGGIPGAEPAVPQDMSPDEEDVQRLLIQFRDEAGECL
GSPFDVPVTITPDKLQLVCNALLEKDEPVPLAFFVHDAEIVASLEKTLAGQSVETEKVLD
IIYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQ
FTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGSQIGRVLSGHSKWITCLCWEP
LHINPECRYLASASKDGSIRIWDTLMGRCDKILTSHTQSVTCVKWGGDGLLYSSSQDRTI
KVWRSQDGVLCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDVRGSLSELKDRA
LQRYNQVRGQEPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIAS
ASFDKSIKLWDGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAKTKKLA
IDLPGHADEVYAADWSPDGQRVASGGKDKCLRIWRR
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggcggcggtgagcgggaccggggccgggatggggatcgcgacggacgggaggggcagc
acctgggagctgcggggtgcgagtgctgcggcgctcaggggtgttctcgccctcccctgg
ggctcccccgcgcggctcctgctcggtgcggggtgtttgtccctcccacgggccctactc
cgtgtccccccgcggaggtcccctctccccgggcgggtgtcgctgccggggcgggggctg
tgcccgctgcccggtgggattcccggcgctgagcccgctgtcccgcaggacatgtcgccg
gacgaggaggatgtgcagcggctcctgatccagttccgcgatgaggcaggggagtgcctg
ggctcccccttcgacgtcccggtcaccatcactcccgacaagctgcagctggtctgcaac
gccctcctggagaaggatgagccggtgcctctggccttcttcgtccacgatgccgagatc
gtggcgtcgctggagaagaccctggcagggcagagcgtggagacagagaaggtcctggac
atcatctaccagccgcaggcggtgttcagggtgcgggcggtgacgcgctgcaccagctcc
ctggagggacacaccgaggccgtcatctccgtggctttcagccccacgggaaagtacctg
gcgagcggctctggggacactactgtgcgcttctgggacctcagcacggaaacgccgcag
ttcacagccaaaggtcaccggcattgggtgctcagcattgcttggtcacctgatggcaag
aaactggcctcaggctgcaagaacagccagatctttctctgggacccagccactggcagc
cagatcggccgagtgctctctggccactccaaatggatcacatgtctgtgctgggaacca
ctccacataaacccagagtgccgttacctggccagtgcctccaaggacggcagcatccgc
atctgggacacgctgatgggcaggtgtgacaaaatcctcacaagccacacgcagtcagtg
acctgtgtgaagtgggggggcgatggcttgctctactcctcctcccaggacaggaccatc
aaagtctggaggagccaagatggggtcctgtgccgcacgctgcagggccacgctcactgg
gtgaacaccatggccctgagcaccgactacgttctccgcaccggcgccttcgagccggcc
gaggccaccatcaacccccaggatgtcagaggctccttgtcagaactgaaagacagggca
ctgcagaggtacaaccaagttcggggccaggaaccagaaaggctcgtctctgggtcagat
gatttcaccttgtttctttggagaccagcagaagacaagaagccactggagagaatgaca
ggccaccaggcattgattaaccaagtcctgttctccccagacacccggataatagctagt
gcttcctttgacaagtccataaagctgtgggacggtaggactggaaagtacctgacgtcg
ctgaggggccacgtgtcggccgtgtaccagatcgcctggtcggccgacagccgcttgctg
gtgagcggcagcagcgacagcaccctcaaggtctgggatgccaagacaaagaaactggcc
attgatctacctggccatgcagatgaggtgtacgcagcggattggagcccggatggacag
agggtagcgagcggagggaaggacaagtgtttgaggatatggcgccgatag

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