Oenanthe melanoleuca (Eastern black-eared wheatear): 130261062
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Entry
130261062 CDS
T09236
Symbol
SMG8
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130261062 (SMG8)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
130261062 (SMG8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
130261062
NCBI-ProteinID:
XP_056362923
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Position
19:complement(2703763..2708570)
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AA seq
967 aa
AA seq
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MPLPGAGPPGAMGTAVGPMSLRELLLAAEAGGAAGGEEEVCVVGIFGKTALQLCSEKEAL
VSTVCDRQVFPLFPEEDPELADGAGGQDGDPATKDYNQLQAYYSQESRVLYLVLTSICDT
PQLLRACGDLAAAENREAGPGHPSGGPAPLPHAEAHEFWKHQEKLHCLSLLYLFSVCHIL
LLVHPTCSFDITYDRVFRALDGLRQKVLPSLKAAIKDCPVGKEWKLNCRPCPPRLLFLFQ
LNGALKVDPLPSRGQDPCGHLEKPPPKKHSPKRRLQHALEDQIYRIFRKSRVLTNQSINC
LFTVPANQAFVYIVAGGPQDGDDPVAMLLDQLRSNCTMRETDSLLAPTLSGPRRYQMMRH
GRQQLSFHAESSSSSSSSSGQLVDCTLKEFLWQHVELVLSKKGFEDSVGRNPQPSHFELP
TYQKWVAAALKLYEVTIEGKDDDPTCGELSSKIMSSIKVLEGYLDIDTKFSENRCQKALP
MAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHARGPAFHKYAMQLNEDCYKFWSNGHQL
CEERSLTDQHCVHKFHLLPKAGEKPEADRNPPILYHNSRARSTGACNCGRKQAPREDPFD
IKAANYDFYQMLEEKCCGKLEHINFPVFQPSTPDPAPARDESSPAPPEGEIEKLKEKEPQ
TQGESTGLSLALSLGQSTGSLGTYPADGQGGGDNAESHGQSGDSKSEKRPSLVDRQASTV
EYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKAYNFHTGLDQQGFIPGTNYLMPWDIVIRT
RTEDEGDLDTNSWPAPNKAVPGKRSAVVMGRSRRRDDIARAFVGFEYEDARGRRFMCSGP
DKVMKVMGGGPKESALKALNSDMPLYILSSTQGRGLKPHYAQLMRLFVVVPDAPLQITLT
PQVQPGPPPCPIFYPEKQEITLPSDGLWVLRFPYAYVTERGPCFPPKESQQLMSYKVLRG
ILKAVTQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcccggggccgggccgcccggggccatgggcacggccgtggggcccatgagc
ctgcgggagctgctgctggcggccgaggcgggcggcgcggcgggcggcgaggaggaggtg
tgcgtggtgggcatcttcggtaaaaccgcgctgcagctctgctccgagaaggaggccctg
gtgagcaccgtgtgcgaccggcaggtgttcccgctgttcccggaggaggatcccgagctg
gcggacggcgccggggggcaggatggagacccggccacgaaggactacaaccagctgcag
gcgtactacagccaggagagccgcgtgctgtacctggtgctcacctccatctgcgacacg
ccgcagctgctgcgcgcctgcggggacctggcggcggccgagaacagggaggccgggccc
ggccacccctccggaggcccggccccgctgccccacgccgaggcgcacgagttctggaag
caccaggagaagctgcactgcctgagcctcctctacctcttctccgtgtgccacatcctg
ctgctggtgcatcccacctgctccttcgacatcacctacgaccgcgtgttcagggctctg
gacgggctgcggcagaaggtgctgccctcgctgaaggctgccatcaaggactgcccggtg
ggcaaggagtggaagctcaactgcaggccatgccctccacgcctcctcttcctcttccag
ctcaacggggctctgaaggtggatccgctgccaagcaggggccaggacccctgtggtcac
ctggaaaagccgcctcccaagaagcattcccccaagaggaggctgcagcacgctctggag
gatcagatctaccgcatcttccgcaagagccgggtgctgactaaccagagcatcaactgc
ctgttcaccgtgcccgccaaccaggccttcgtgtacatcgtggccggcgggccccaggac
ggagacgatcccgtggccatgctcctcgaccagctcaggagcaactgcaccatgagagag
actgactctctgctggctcccaccctgtcgggacccaggaggtatcagatgatgaggcac
ggccggcagcagctctccttccacgcagagagcagcagctccagctccagctcctctggg
cagctcgtggactgcaccctcaaggagttcttgtggcagcacgtggagctggtgctcagc
aagaagggctttgaggacagcgtggggaggaaccctcagccctctcactttgagctcccg
acttaccagaagtgggtggctgcagctctaaaactctatgaagtgaccatcgaaggcaaa
gacgacgaccccacctgtggcgagctgagctcaaaaatcatgagcagcatcaaagttttg
gaaggctacctagacatagacaccaagttctcggaaaaccgttgccagaaggctctgccc
atggcccacagcgcctaccagtccaacctgccccacaattacaccatgacagtgcacaag
aaccagctggcccaggccctgcgtgtgtacagccagcacgcccggggcccagccttccac
aaatacgccatgcagctcaacgaggactgctacaagttctggagcaacgggcaccagctc
tgcgaggagaggagcctgactgaccagcactgcgtgcacaagttccatctgctcccaaaa
gcaggggaaaagccagaagcagacagaaatcctccaattctgtaccacaacagccgggct
cgttccactggtgcctgtaactgtggaaggaagcaagctcctcgggaggacccctttgat
atcaaagcagctaattatgacttttatcagatgctggaagagaagtgctgtgggaaactg
gagcacatcaacttccctgtatttcagccaagcacacctgacccagcgcctgctcgggac
gagtcctcgcccgcccctccagagggagagattgagaaactcaaagagaaagaacctcag
actcagggagagagcacaggcctgagcttagccctgagcctgggccagtccacaggcagc
ctgggcacttacccagccgatggccagggtggaggggacaatgcagaaagccacgggcag
agcggggactccaagagcgagaagaggccgagcctggtggatcgccaggcgtccactgtc
gagtacctgcccgggatgctccattccaattgccccaaaggcctcctgcccaaattctcc
agctggtcactggtcaagctggggcctgctaaggcttataacttccacacaggcttagat
caacagggctttatcccgggaacaaactatttaatgccttgggacattgtcatcaggacg
agaactgaagatgaaggagacttggacaccaattcctggcctgcccccaacaaggctgtt
cctgggaaaaggagcgcggtggtgatgggaaggagccggcggagggacgacatcgctcga
gctttcgtgggcttcgaatatgaagatgcacgtggcaggaggttcatgtgctcagggcct
gacaaggtgatgaaggtgatgggagggggcccgaaggaatctgccctgaaagccctcaat
tccgacatgcccctctacatcctgtcctcgacgcagggccgcggcctcaagccccactac
gcccagctcatgaggctcttcgtggtggttcctgatgctcctctgcagatcaccctaacc
cctcaggttcagccaggaccaccaccctgtcctatcttttaccctgagaagcaggaaatc
acccttccctctgatggactctgggtgctaaggtttccctacgcctatgtgacagaacgg
gggccctgcttccctcccaaagaaagccaacagttaatgagctacaaagttctccgagga
atcctgaaagcagttacacaataa
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