Oenanthe melanoleuca (Eastern black-eared wheatear): 130261101
Help
Entry
130261101 CDS
T09236
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130261101 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oma04040
]
130261101 (TRPV1)
Ion channels [BR:
oma04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130261101 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
130261101
NCBI-ProteinID:
XP_056362985
LinkDB
All DBs
Position
19:complement(3296752..3308695)
Genome browser
AA seq
840 aa
AA seq
DB search
MSSILGKMKKFGSFDMEESEVTDEHIDGEDSAQDAPDNSQGPPSTKVQPLKSNIFARRGR
FVMGDSDKVMAPMDSFCQMDHLMAPFHVNLERGKLHKLLSTDSITGCSEKAFKFYDRRRI
FDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTIPLLL
DIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACGEFFR
KIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANIAAEDSMGNMVLHTLVEIADN
TKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYILRREI
KDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLLVEPL
NRLLQDKWDRFVKHLFYFNFFVYTIHITILTAAAYYRPVQKNEKPPFTFGYSTGEYFRVT
GEILSVLGGLYFFFRGIQYFVQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLYFCGQEL
YVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFSTAVV
TLIEDDNEGQETNISDYARCCHVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENYRFKS
VFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYLNCLR
HSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRRNASFSI
KPGRVSGKHWKTLVPLLKDGEKRREEPQKLPEEAKLKPVLEPYFEPEDSEVLKESIPKSV
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccattcttgggaagatgaagaagtttggcagttttgacatggaggaatctgaa
gtgacagatgaacacatagatggggaggactctgcccaggacgcccctgacaattcccag
ggcccacccagcaccaaggtgcagccactcaaaagcaacatttttgcaagacgaggccgc
tttgtgatgggggacagtgacaaggtcatggctcccatggactccttctgccagatggat
cacctgatggcacctttccatgtgaatttggagaggggcaaacttcacaagctcctatct
acagattccatcacaggctgctcagaaaaagctttcaaattttatgaccgcagaaggatc
tttgatgctgtagcccaaggcaacacaaaggacctcagtgacctgctgctgtaccttaat
agaaccttcaagcatctcacagatgaggagttcaaagagcctgaaactggcaaaacctgt
ttactgaaagccatgctgaatctgcatgatgggaagaatgataccattcccttgctgctg
gatattgcaaggaaaactggaactctgaaggagtttgttaatgcagaatacactgacaac
tactacaagggccagactgctcttcacattgccatcgagaggaggaacatgtacctcgtg
aagctcctggtccagaatggagcagatgttcatgccagagcctgtggggagttcttcagg
aaaatcaaagggaaatctggcttttattttggagagctgcctttgtccctggctgcctgc
accaaccagctctgcattgtgaaattcctcctggagaatccctaccaggcagccaacatt
gctgctgaggactccatgggcaacatggtcctgcacaccctggtggagattgcagataac
accaaggataacaccaagtttgtgaccaagatgtataataacatattgatccttggtgcc
aaaattaatcctatcctcaagctggaagaactcaccaacaagaaagggctgactccttta
actctggcagccaaaacagggaagatagggattttcgcttacatcctcagacgggagatc
aaggaccctgagtgcagacacttgtccaggaagttcactgagtgggcctatggacctgtc
cactcctctctttatgacctgtcctgtatagacacctgtgagaaaaattcagtgcttgag
atccttgcctacagcagtgagacacctaaccgtcacgagatgctgctggtggaacccctc
aacaggctgctgcaagacaagtgggaccgctttgtcaagcacttgttttacttcaacttc
tttgtctacaccatacacatcaccatcctcactgcagccgcttactacagacctgtacag
aagaatgaaaagcctcccttcacctttggttacagcactggggaatattttcgagtaact
ggagagatcctgagtgtactgggaggcctctatttttttttcagagggatccagtatttt
gtgcagaggcgcccatcactcaggacactgatagttgatggctacagtgaggttcttttc
tttgtccactccctgctcctgctgagctctgtggtgctgtacttctgtggccaggagctc
tatgtggcatccatggtgttctccttggccctgggctgggccaacatgctgtactacacc
cggggcttccagcagatgggaatttactccgtcatgatcgccaagatgatccttagagat
ttatgtcgcttcatgtttgtctatcttgtattcctcttgggattttctacagctgtggtg
actttgattgaagatgacaacgaggggcaggaaacaaatatctctgactatgcccggtgc
tgccacgtgaaacgaggccgcacctcctacaacagcctctactacacctgcctggagctc
ttcaagttcaccattggcatgggggacctggagttcacagagaactacaggttcaagtct
gtgtttgtcatcctgctggtgctctatgtcatcctcacctacatcctcctgctcaacatg
ctcattgcactgatgggggagactgtcaacaaaattgcacaggagagcaagagcatctgg
aaactccagagagccatcacaatcctggacattgagaacagctacttgaactgtctgagg
cactcgttccgctctgggaagcaagtcctggtggggatcacacctgatggccaagatgat
tacagatggtgcttcagggttgatgaagtgaactggtccacgtggaacactaacctgggc
ataatcaatgaagaccctgggtactctggggacctcagacgaaatgccagtttctccatt
aagcctggcagagtttcagggaagcactggaaaacattggttccacttctaaaagatgga
gagaagaggagagaagagcctcagaagctgccagaagaagccaaattaaaacctgttttg
gagccttattttgagccagaagattctgaggtgttgaaagagtcaattccaaagtcagtc
taa
DBGET
integrated database retrieval system
