Oenanthe melanoleuca (Eastern black-eared wheatear): 130261232
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Entry
130261232 CDS
T09236
Symbol
CDH4
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130261232 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oma04515
]
130261232 (CDH4)
Cell adhesion molecules [BR:
oma04515
]
Cadherins
Major cadherins
130261232 (CDH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Stevor
Cadherin_4
DUF5527
Motif
Other DBs
NCBI-GeneID:
130261232
NCBI-ProteinID:
XP_056363205
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All DBs
Position
20:4072145..4486680
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AA seq
917 aa
AA seq
DB search
MRAGPRRRLLLLLLLPVWGSAAAHNGDLTVRPTCKPGFSEQDYTAFISQNIMEGQKLLKV
KFNNCAGNKGVRYQTNSLDVKVRADGTLIAAQPLQLPPKQLVLLVTAWDPQSLASWEAVV
RFLVADKSQHNGHKPKGRKAVPGELVQQQSDTLLPWRQHQSHSGLRRQKRDWVIPPINVP
ENSRGPFPQQLVRIRSDKDKEIHIRYSITGVGADQPPMEVFNIDPVSGRMYVTRPMDREE
RASYHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTV
TANDADDGTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYIVIV
QATDMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTYSGEVPENRVEVVVANLTVLDRD
QPHSPNWNAVYRIISGDPSGHFTVRTDPVTNEGMVTVVKAVDYEMNRAFMLTVMVSNQAP
LASGIQMSFQSTAGVTISVTDVNEAPYFPTNHKLIRLEEGVPPGTVLTTFSAVDPDRFMQ
QAVRYSKLSDPANWLNINATNGQITTAAVLDRESDYIKNNVYEATFLAADNGIPPASGTG
TLQIYLIDINDNAPELLPREAQICEKPNLSVINITAADADIDPNVGPFVFELPSVPSAVR
KNWTITRLNGDYAQLSLRIMYLEAGVYDVPIIVTDSGNPPLFNTSVIKVKVCPCDENGDC
TTIGAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDN
ILKYDEEGGGEEDQDYDLSQLQQPETMDHVLNKTPGVRRVDERPIGAEPQYPIRPVIPHP
GDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDW
GPRFKKLADMYGGGEED
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagggccggcccgcggcggcggctgctgctgctgctcctcctgcccgtctggggctcg
gcggcggcacacaatggggatcttacagttagacccacatgcaagcctggcttctcagaa
caagactacacagcattcatctcccagaacatcatggaagggcagaagttactcaaagtg
aaatttaataactgtgccggtaacaagggcgtgcggtaccaaaccaacagcctggacgtc
aaggtgagggcagacgggaccctgatcgctgcccagcccctgcagctgccccccaagcag
ctggtcctgctggtgacagcctgggacccccagagcctggccagctgggaggctgtggtc
aggtttctggtggcagacaagtcccagcacaacgggcacaagcccaaaggaaggaaggca
gtgcctggagagctggtgcagcagcagagtgacaccctgctgccctggaggcagcaccag
agccacagcgggctgcggcggcagaagcgggactgggtcatcccgcccatcaacgtgccc
gagaactcccgcgggcccttcccgcagcagctggtccggatccgctccgacaaggacaag
gagatccacatcaggtacagcatcacgggcgtgggagccgaccagccgcccatggaggtg
ttcaacatcgaccccgtgtccggcaggatgtacgtcacacggcccatggacagggaggag
agagcttcctaccacctccgggctcatgcagtggatatgaatggaaacaaggtggagaat
cccattgacctttacatctacgtgattgatatgaatgacaacaggccggagttcatcaac
caagtctataatgggtctgttgatgaaggctctaaaccaggcacctacgtgatgacggtg
acggcgaacgacgcggacgacggcaccacggccaacgggatggtgaggtacaggatcgtc
acccagaccccgcagagcccctcccagaacatgttcaccatcaacagcgagacaggggac
attgtcaccgtggctgctgggctcgacagggagaaagttcagcagtacatagtcattgtt
caagcaacagatatggaaggaaatcttaactatggtctctcaaacacagccacagccatc
atcacagtgacagatgtgaatgacaacccccctgaattcaccaccagcacttactcagga
gaggtgcctgagaacagggtggaggtggtggtggccaacctgacggtgctggaccgggac
cagccgcactccccgaactggaacgccgtgtaccgcatcatcagcggggacccctcgggc
cacttcaccgtgcgcaccgaccccgtcaccaacgagggcatggtcaccgtggtcaaggca
gtggattacgagatgaacagagctttcatgctgacagtgatggtatcaaaccaagctccc
ctggccagtggcatccagatgtccttccagtcgacagcaggagtcaccatttcagtgaca
gatgtcaacgaagccccgtacttccccaccaaccacaagctgatccggctggaggagggc
gtgcccccggggaccgtgctgaccaccttctcagccgtggatcccgatcgcttcatgcag
caggcagtgagatactctaagctgtcagatcctgcaaactggctgaacattaatgccaca
aatggtcagatcactactgctgctgtccttgatcgagagtcagactacattaagaataat
gtctacgaggccacattcctggctgctgacaacggaatcccccccgccagcggcacgggc
acgctgcagatctacctgatcgacatcaacgacaacgcgcccgagctgctgccgcgggag
gcgcagatctgcgagaagcccaacctgagcgtcatcaacatcacggccgccgacgccgac
atcgaccccaacgtggggcccttcgtcttcgagctgcccagcgtgccctccgcagtcagg
aagaactggaccatcacccggctcaatggggactacgcccagctgagtttgaggatcatg
tacctggaggcaggagtgtacgacgtgcccatcatcgtgacagactcgggaaacccgccc
ctgttcaacacctctgtcatcaaggtgaaggtgtgcccgtgcgacgagaacggcgactgc
accaccatcggcgcggtggccgcggcggggctgggcacgggggccatcatcgccatcctg
atctgcatcatcatcctgctcaccatggtcctgctgtttgtggtgtggatgaagcgccgc
gagaaggagcgccacaccaagcagctgctcatcgaccccgaggacgacgtcagggacaac
atcctcaagtacgacgaggagggaggtggagaggaggatcaggattacgatttaagccag
ctccagcagccagagaccatggatcacgtgctgaacaagacacctggagtcagaagagtg
gatgaaagacctattggtgctgaaccacagtatcctataagaccagtaatcccacatcca
ggggatattggtgattttattaatgagggcctgcgtgctgcagacaacgaccccacagcc
cccccctacgattccctgctggtgtttgactacgagggcagcggctccaccgccggctcc
gtcagctccctcaactcctccagctccggggaccaggactacgactacctgaacgactgg
gggcccaggttcaagaaactggcggacatgtacgggggaggagaggaagattaa
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