Oenanthe melanoleuca (Eastern black-eared wheatear): 130261534
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Entry
130261534 CDS
T09236
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130261534 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oma03021
]
130261534 (TAF4)
03036 Chromosome and associated proteins [BR:
oma03036
]
130261534 (TAF4)
Transcription machinery [BR:
oma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130261534 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
130261534 (TAF4)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130261534 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
130261534
NCBI-ProteinID:
XP_056363820
LinkDB
All DBs
Position
20:complement(4515301..4551762)
Genome browser
AA seq
1103 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSGSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFSGTPVTANPAPAPAVAPLVNNGPGSVGKGNAVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGTGAPTVTLVRPPIHTAGPTVAAAGAAT
QNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSTVPAAPATQVIKSESPKT
IVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQNTLTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEPEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSAAAVLLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKAGALIRPPQVTLT
QTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQVAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRI
LEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQRNISYKDDERYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccccagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcggcagcaagatgggactgagtgcccca
gagatcacaaaagcaggggcaggaggagtgcaggggggtgttattaatcataacaccagg
tcccagacttcagctctggatggagccaccacaacgagcaccagcaccaccactgcagca
gcaggaggatctgaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaagattgggaccacgacagtg
cagactttgaatgggagtaacgtggtgatgaactctcaccacacaggaagtgctgctttc
tctgggactcccgtgactgccaaccccgctcctgcacctgctgttgcccctctcgttaac
aatggacctggatctgtggggaaaggaaacgctgttaatgctgttttgccctcagcttct
aacactgtcatccagacttctttccttaatactgctgtgtcctctgcatcctcctcctcg
cccacagtgatctcctcgcagccaccgccgagcgttggcaccggggcgcccacggtaacg
ctggtgaggcccccgatccacacagcaggacccacggtggctgcagctggtgcagccact
cagaacgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gccacagccactgtgggatctggagtttccctccagacatcacttgtgaacagccagtct
ggttccactgtgccagcagctcctgccacacaggtcatcaaatctgagtctcctaaaact
atagtccaggcagtatcccagcagcagacgctggctactggtggccagcccagtactaca
gggggtaacatgattattgggcaaactatgcaagctgggctctccaatgttgctcccaat
cctggtgggatacctcctgcagctcctggcacccccacaggaatggctaaaggcactgcc
aatacagtggcacaaagtctgccgaggactccaacaccaactacgagtggaatcagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccaactaac
attcagaattttcagttaccaccaggcatggtcctggtgcgcagtgagaacgggcagctg
ctgatgatcccccagcaagccctggcacagatgcaggcacaggcacatgcccagtctcag
cctcagaacactctgactcctcgtcctgctacacctaccagtgcacccccagtgcagata
tccacagtgcaggctccaggaacacccattattgcacgacaggtgacaccaactactatc
atcaagcaagtgtctcaggctcaaacaacagtgcaacccacgacaacgctacagcgtccc
ccggttgtgcaacctcagattgttctgggtggtactgcacaaacaaccacattggggaca
gcaacagctgtacaaactggaactcctcagagaacagtgcaagggacaacagccacctcc
actgctgccacagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccacatta
ataaaactggcatcatctggaaaacagtcctcagagactgcggctaacgtgaaggaatta
gtacagaacctgctggatggaaaaattgaaccagaagactttaccagtaggctctacaga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ctgagacagttaacaccagactctgcagctttcattcagcagagccagcagcagcagccg
acgacgcaggcgacgatagccacgatcccgtcggcggcggccgtgctgctgagctcctca
gtgcagcgcacggcaggcaaggccactgccactgtcaccagtaccctccagcagcccgtc
atcagcctcactcagcccacacaagttggtgtcagtaaacaaggacagtccacgccactg
gttatccaacagtctcaaaaagcaggggcattgataaggcctccacaagtcacgttgaca
cagacacccatggtggcattgcggcaaccacacagtcgtattatgctcactactcctcaa
atccaactgaatcaacttcagacagtacctgtggtaaaaccagcagtattacctggaaac
aaagctattgccactgtttcgacacaagtagctgctgctcagaagaataaactgaaagaa
cctgggggaggctcttttagggatgatgatgacattaatgatgttgcatcaatggctgga
gtcaacctgtcagaagaaagtgctcggatattggcaacaaactctgagctcgtgggcaca
ttaacaaggtcctgtaaagacgaaaccttccttttcccagcacctttgcaaagaaggata
ttagaaataggtaaaaaacatggaataacagaaatccatcctgatgtagttagctacgta
tcacatgctacacaacaaagactacaaaacctcgtggaaaaactatcagagactgctcaa
caaaggaatatttcctacaaggatgatgaaagatatgaacaagcaagtgacgttcgggca
cagctcaagttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaa
agggaaattttaatgcgcgcagcaaagtctcgatctcgacaagaagatccagaacagctt
aggttgaaacagaaggccaaggagatgcagcagcaagagctcgcacaaatgagacagagg
gatgccaacctgactgcattagctgccatcggtcccaggaagaaaaggaaagtagactca
ccaggatctggatcagggacagagggatctggttcgagtgcagcagtcccaggcagctct
ggagttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggac
ctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagca
ttccttaagtaa
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integrated database retrieval system
