Oenanthe melanoleuca (Eastern black-eared wheatear): 130261622
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Entry
130261622 CDS
T09236
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03013
Nucleocytoplasmic transport
oma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130261622
03015 mRNA surveillance pathway
130261622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130261622
Enzymes [BR:
oma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130261622
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130261622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130261622
NCBI-ProteinID:
XP_056364030
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Position
21:complement(1461297..1472434)
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AA seq
479 aa
AA seq
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MATDSWALAVDEQEAAAESLSTLHLKDEKTKPDANGAVVKADDNVEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGNFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCSNRDEKFRALCNIYGAITIAQAMIFCHTRKTAGWLAAELSREGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKINN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggccgtggacgagcaggaggcggcggccgagtcgctg
agcactttacacctgaaggatgaaaaaaccaaaccagatgccaatggtgctgttgtcaag
gcagatgacaatgtggagaagacggaggatgaggagaaggaggacagagctgcccagtcc
ctgctgaacaagctgatccgcagtaacctggtggacaccacaaatcaggtggaggtgctg
cagagggaccccacatcccccctctactctgtcaagtctttcgaggagctgcgcctgaaa
ccacagctcctgcaaggagtctatgccatgggcttcaacagaccatctaagatccaagag
aatgccctgcccatgatgctcgctgaacccccgcagaacctgatcgcgcagtcgcagtcc
ggtactggcaagacagctgccttcgtcctggccatgctcagcagggttgagcctggcaac
aagtatccacagtgtttgtgcctttccccaacatacgagctggcacttcaaacaggaaaa
gtgattgaacagatgggaaacttctacccagagctgaaacttgcatacgctgttcgaggc
aacaaactggagagagggcagaagatctcggagcagatcgtcattggcacacccggcacc
gtgctggactggtgctccaagctgaagttcatagatcccaagaagatcaaggtgtttgtg
ttggatgaggcagatgtgatgattgccacccagggccaccaggaccagagtatccgcatt
cagagaatgctccccagggactgccagatgctcctgttttcagccactttcgaggattct
gtgtggaagtttgctcaaaaagttgttcctgacccaaacatcatcaagctgaagcgtgag
gaggagaccctggacaccatcaagcagtattatgtgctgtgcagtaacagagatgagaag
ttccgggctctctgtaacatctacggcgccatcaccatcgcccaggccatgatcttctgc
catacccggaagacggcggggtggctggcggcggagctgtcccgcgagggccatcaggtg
gcgctgctgagcggggagatgatggtggagcagagagctgccgtgatcgagcgcttccga
gagggcaaggagaaggtgctggtgaccaccaacgtctgtgccagagggattgatgtagag
caggtctctgttgttatcaattttgacctgcccgtggataaggatggaaatccagacaat
gagacctacctgcaccggatcggccgcaccggccgcttcggcaagcgagggctggccatt
aacatggtggacagcaagcacagcatgaacattctcaacagaatccaggaacatttcaac
aaaaagataaacaaattggatactgacgacttggatgaaattgagaagataaataactga
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