Oenanthe melanoleuca (Eastern black-eared wheatear): 130261623
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Entry
130261623 CDS
T09236
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma00310
Lysine degradation
oma01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130261623 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130261623 (PRDM2)
03036 Chromosome and associated proteins [BR:
oma03036
]
130261623 (PRDM2)
Enzymes [BR:
oma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
130261623 (PRDM2)
Transcription factors [BR:
oma03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130261623 (PRDM2)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130261623 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-H2C2_2
zf-C2H2_ZNF462_1st
zf-C2H2_11
zf-MYST
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
130261623
NCBI-ProteinID:
XP_056364031
LinkDB
All DBs
Position
21:2980701..3029888
Genome browser
AA seq
1659 aa
AA seq
DB search
MNQNTSDSPVAVETLDDVPEHVLRGLPEDVRLFPSAVDKSRLGVWATKSILKGKKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPEKGNWLRYINWARSGKEQNLFPLEINR
TIYYKSLKPIAAGEELLVWYNGEDDPAIAAAIEEERASARSRRHSPKARRGKKKTQEAKN
KGKKAADTKQKKTDLDSTSADMRDSKEGHKEEDETPSVSAVLSLEQTAVIQEMVNQDVLP
KLMIPSPTNEPQVVTEDKPGEAINYASDDLDDDEEDDEEEEDEEEIEDANMPKENAEMPL
MCEEKLDSLEEQKSTSEESPESSPKKKLVVKIPKAQGESNGDVQETFMFPCQHCERKFTT
KQGLERHMHIHISTLSHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLD
NVADNQVIVDDGLKDDLNVSSLVQDSVLESEKVSQEMSNSAFAEENKEPKELHPCKYCKK
VFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPPLPTEPAPAVQSVYIASTEIEEEGE
GDDVYLMDISSNISENLNYYIDGKIQSNSNTSNCDVIQMESNSADLYGLNCIISPVTVEI
SSNLKVTQTHVNEPAKEPSSSGSSESKKRRTASPPLVPKIKTEIDPEPITPTSSLNLPLS
ISTESLPFHKEKGVYLSSKLKQLLQTQDNKKITPSSEITKIGPSVTSSPILPPVSSRFKR
RTSSPPSSPQHSPVLRDFVKSGEGKTVWNDNVRSSKMPKLESHSNSPAWSLTGREDKETL
SPLCFEEYKISKDWTAAPTFGNVCNQQPLDLSSGMKQRSDVKSKTQVPWESVLDLSVHKK
PCSDAEIREYKENSTQPTCSGVKKKKPTTCMLQKVLLNEYNGTEAALESGLGVDSPSRAA
EPPAEPEAGPALSAPSASDAQPVGSCASPMPQAPAAPAVCQLPPLLTPTNPPSPPPCPPV
LTVATSPPPLLPTMPLPIADVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSPVPS
VEPLISAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLESSLPI
IKQEEAESEQQKAREDPHTSSQSGVVQETFNKSFVCNVCDSPFLSIKDLTKHLSIHAEEW
PFKCEFCVQLFRDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKECS
HHEFESGTLRPQNFTDPSKANAEHMQSLPEDSLEPSKEEEDEDLNDSSEELYTTIKIMAS
GVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKC
GKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKNAFRRMG
QPKRLNFNVEISKMSSNKLKISALKKKNQLVQKAILQKKKSAQQKAELKNNSSETDSHIC
PYCNREFTYIGSLNKHASYSCPKKPISPSSKKNSSKKSAASSPANSDKGSNQRRRTADAE
IKMQSTQPHLGKTRARTSGPAQLQLPSASFKSKQNVKFVPSMRSKKPNSSSSLRNSSPVR
VSKMSHVDGKKTKVVSKNNSSGISSKASRKLHVRIQRNNKAVLPSKSVASKKKADRFSVK
SRERIGGPITRSLQQAANAEAAENKRDESSTKQELKDFR
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaagtgactcccctgttgctgtggagaccttggatgatgttcctgag
cacgtgctccggggccttcctgaggatgtgaggctcttcccatctgctgttgacaagagt
cggcttggtgtctgggcaacaaaatcaattttgaaaggcaagaagtttggaccatttgtt
ggtgacaagaaaaaaagatctcaagttaagagcaatgtgtacatgtgggaggtgtactac
cccaacctgggctggatgtgtgtggatgccaccgacccagagaagggcaactggctgcgc
tacatcaactgggcccgctcggggaaggagcagaacctcttccctctggagatcaacagg
accatttactacaagagcttgaagccaatcgcggcgggcgaggagcttttggtgtggtac
aatggcgaggacgacccggcgatagcggccgcgatcgaggaggagcgagcgagcgcccgc
agccgccggcactccccgaaggcccgcagaggaaagaagaagactcaggaagctaaaaac
aagggaaagaaggcagcagatacaaaacagaaaaagactgatttggattctacttctgca
gatatgagggattctaaagagggtcataaagaagaagatgaaacgccttctgtttctgct
gtgctgtctctggaacaaacagctgtgattcaggaaatggtaaatcaagatgtacttcca
aagctgatgatccccagtccaaccaatgagccacaagtggtaactgaagacaaaccagga
gaagcaataaactatgcatcagatgatttagatgacgatgaagaggatgatgaagaagag
gaagatgaagaggagatagaagatgccaatatgcctaaagaaaatgctgaaatgcctttg
atgtgtgaggagaagttggactccttggaagaacaaaagagtacgtcagaggaatctcca
gaaagctctccaaagaaaaaactcgtggtgaaaattccaaaagcacagggggaatccaat
ggtgatgttcaggaaacattcatgtttccctgccagcattgtgagaggaagtttacaaca
aagcaggggctggagcgccacatgcacatccacatttccaccctgagccacgccttcaag
tgccggtactgcgggaaagcctttggcacccagatcaaccggcggcggcacgagcggcgc
cacgaggccgggccgaagaggaaaccattcctgacactgacctcctcacagcacttggat
aacgttgctgataaccaggtgattgtggatgatggtcttaaagatgacctgaatgtttcc
agtcttgtgcaagactctgttttggagtctgagaaagtttcccaggaaatgtcaaactct
gcgtttgctgaggaaaataaggagcccaaagagttgcatccgtgcaaatactgcaaaaag
gtttttggtactcacaccaacatgaggaggcatcagcgtagggttcatgaacgtcatctt
attcccaaaggtgtcagaagaaaaggattcttcactgaggagccacctctcccgacagag
ccggcccctgcagtgcagagtgtctacatagcgagcacagaaatagaggaggaaggtgaa
ggagatgatgtctatcttatggatatatccagcaatatctctgagaatttaaattactac
attgatggtaaaattcagtccaacagcaacactagcaattgtgatgtgattcagatggag
tccaactctgcagacttgtatggattgaattgtataatcagtccggtcacagtggaaatt
tcctccaatttaaaggttacacaaacacatgtgaatgaacctgctaaggaaccctctagc
agtgggagcagtgaatccaaaaagagaagaactgctagccctcctcttgtaccaaaaata
aaaactgaaatagacccagaacctataactcctactagttctttaaatcttcctcttagc
atttcaacagaaagcttaccttttcataaagaaaaaggggtttatttgtcatcaaaatta
aagcagcttcttcagacacaggacaataagaagataactccatcaagtgaaatcactaaa
ataggaccttctgttacatcatcacctattttgcctccagtatccagcaggtttaaaaga
aggaccagctctcctcccagttctccacagcacagtccagtgcttcgagactttgtcaaa
tcaggtgagggaaaaactgtgtggaatgataatgttaggagttcaaaaatgccaaagtta
gagagccacagcaactcacccgcttggagcttgactggaagggaggacaaagagactttg
agccctctttgctttgaagaatataaaatatctaaagactggacagcagctccaactttt
ggcaacgtgtgcaaccagcagccactggatttatccagtggtatgaaacaaaggtctgat
gtcaaaagcaagactcaggttccctgggaatccgttctagatctaagcgtgcataagaag
ccctgcagcgatgctgaaattagggaatacaaagaaaattccacacagccaacgtgtagt
ggtgttaagaagaagaaacccaccacctgcatgctgcagaaggttctgctgaacgagtac
aacgggacagaggcggccctggagagcgggctgggcgtggacagccccagcagggccgcg
gagccgccggcagagcccgaggccggtcccgctctctcggcgccgtcggccagcgacgct
cagcccgttggctcctgcgcctcccccatgccacaggcgcctgctgcccctgctgtgtgc
cagctgcctcccctgctgacacccaccaaccccccctccccgcctccctgcccccctgtg
ttaacagtggccacctcgcctccccccctgctccccaccatgcccttacccatcgcagat
gtctctgccagtgccactaacacttcctcctgtccctccccactctccaacactactacc
caatccccactgccagttctttcacctacagtttctccttctccatcccctgtcccttct
gttgaacctcttatttctgctgcttcacctggcccccctacactgtcttcctcttcttcc
tcctcctcttcctcctctttctcatcctcttcctcctcatcgtctccatctccacctcct
ctttctgtagtttcttctgttgtttcctctgctgataatcttgaaagttctctcccaata
ataaagcaggaagaagctgaaagtgagcagcagaaagcaagagaagatcctcatacttca
agtcaatcaggagtagtgcaggaaacgttcaacaagagctttgtgtgcaatgtctgcgac
tcaccttttctttccattaaagacctgacgaagcatttatccattcatgctgaagaatgg
cccttcaaatgtgaattctgtgtgcagctttttagggataaaacagacttgtcagagcat
cgctttctgcttcatggtgtagggaatatctttgtttgttcagtgtgtaaaaaggaattt
gcttttttgtgcaatttgcaacagcatcaacgggatctccatccagacaaagagtgctca
catcatgagtttgaaagtgggactttgagaccccagaattttactgaccccagtaaggcg
aacgcagagcacatgcagagcctgccagaggattctttggaaccctcaaaagaggaggaa
gatgaagatctaaatgattcttctgaagagctttatactactataaaaataatggcttct
ggagtgaaatctaaagatccagatgttcgtatgggcctcaatcaacactacccaagcttt
aaaccacctccgttccagtatcaccatcgtaatcctatgggtattggagttactgcaacc
aacttcacaacccacaatatcccacagactttcactactgccattcgatgcacaaaatgt
ggaaaaagtgttgataacatgcctgagttacacaaacacatactggcctgtgcatctgct
agtgataaaaagagatacacacctaaaaaaaatccagtacccctcaaacagacagtgcag
cctaagaacggcatggtggttattgctgggcctgggaagaacgccttcagacgaatgggt
cagcctaaaagactcaatttcaatgttgagattagcaaaatgtcctccaataaactaaaa
ataagtgcattgaaaaagaaaaaccagcttgtccagaaagctatcctgcaaaaaaagaaa
tctgcccagcagaaggcagaactgaaaaataactcatctgagacggactctcacatctgc
ccctactgtaacagagagttcacttacattgggagtttgaacaaacacgcatcctacagc
tgtcccaaaaaacccatctctccctcctccaaaaagaattcttccaaaaaaagtgcagct
tcttcacctgcaaacagtgacaaaggcagcaaccagcgcaggcgaacagcagatgcagaa
atcaaaatgcagagcactcagcctcacctgggcaagaccagagcacgaacctcaggacct
gcacagctccagctcccctctgcctccttcaagtccaaacaaaacgttaaatttgtacct
tccatgcgatctaaaaagccaaattcatcttcatcattgaggaactctagtcctgtaaga
gtgtctaaaatgtcccatgttgatgggaaaaaaactaaggtggtttctaagaacaattcc
tctggaatatccagcaaagcgtcccggaaattgcacgtcagaatacaaaggaataataaa
gctgttctgccaagtaaatctgtggcgagtaagaaaaaggcagacaggttcagtgtaaaa
tctagagagaggattggaggaccaatcactcgaagcctgcagcaggcagcaaatgcagag
gcagcagaaaacaaaagagatgaaagcagtacaaagcaagagctaaaagatttcaggtaa
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integrated database retrieval system
