Oenanthe melanoleuca (Eastern black-eared wheatear): 130262066
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Entry
130262066 CDS
T09236
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130262066 (TIA1)
03041 Spliceosome [BR:
oma03041
]
130262066 (TIA1)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130262066 (TIA1)
Spliceosome [BR:
oma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130262066 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
130262066
NCBI-ProteinID:
XP_056364827
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All DBs
Position
22:complement(1309134..1327996)
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AA seq
368 aa
AA seq
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MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS
TYETNTKQLSYEEVVTQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQILEIRVFPDKGY
SFVRFSSHESAAHAIVSVNGTSIEGHVVKCYWGKETPDMVTPVQQGQLSYPPPYGQWGQW
YGGAQLGQYVPNGWQLPSYGLYSQAWNQQGFGQSQSSGPWMAASYGVQGQNGAVVPPQPG
FRVGFETP
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaaatgcccaagaccctgtacgtggggaacctctccagggacgtgaccgag
gctctgatcctgcagctcttcagccagattggaccctgcaagaactgcaagatgatcatg
gatacagctggcaatgacccctactgcttcgtggagttctacgagcaccggcacgcggcg
gcggcgctggcggccatgaacggcaggaagataatgggtaaggaggtcaaagtgaactgg
gccaccacccccagcagccagaagaaagacaccagcaatcatttccacgtgtttgttgga
gacctcagccctgagatcacaactgaggacatcaaagcagcttttgctccctttggaaga
atctcggatgcacgggtggtcaaggacatggccacaggcaagtccaagggctatggcttt
gtgtccttcttcaataaatgggacgctgagaacgccatccagcagatgggggggcagtgg
ctcggggggcgacagatccgaaccaactgggccaccaggaaacctccagctcccaagagc
acctatgagacaaacaccaaacaactgtcctacgaggaggtggtcactcagtccagcccc
agcaactgcaccgtgtactgcgggggggtcacctcgggcctcacagagcagctgatgcgc
cagaccttctccccgttcgggcagatcctggagatccgagtgttcccggataaaggctac
tcctttgtcaggttcagctcccacgagagcgccgcccacgccatcgtctccgtcaacggc
accagcatcgaggggcacgtggtgaaatgttactggggcaaggagacccctgacatggtc
acacctgtgcagcagggccagctgagctacccgcccccctacgggcagtgggggcagtgg
tacgggggggcccagctgggccagtacgtgcccaacggctggcagctgcccagctacggg
ctgtacagccaggcctggaaccagcagggcttcgggcagagccagtcctcagggccctgg
atggctgccagctacggcgtgcaggggcagaacggcgccgtggtgccgccccagcccggc
ttccgcgtgggcttcgagaccccctga
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integrated database retrieval system
