Oenanthe melanoleuca (Eastern black-eared wheatear): 130262411
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Entry
130262411 CDS
T09236
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04140
Autophagy - animal
oma04148
Efferocytosis
oma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130262411 (VPS11)
04148 Efferocytosis
130262411 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130262411 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130262411 (VPS11)
Membrane trafficking [BR:
oma04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130262411 (VPS11)
Hops complex
130262411 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-C3HC4_3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
130262411
NCBI-ProteinID:
XP_056365482
LinkDB
All DBs
Position
24:complement(71235..81946)
Genome browser
AA seq
929 aa
AA seq
DB search
MAAYLQWRRFVFFDRETVREPAGPDGTGAKPFALPPGIAVCDSGRGSLVFGDILCQIWFL
PRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSISDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFSGNEAQNSDKQVL
NIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKV
LRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGKLPFEQAESNMKRYGKIL
MHHVPNETTELLKILCTDYRPLGVNEGPGMLEGKKANSEEFIPVFANNSRELKAFLEHMT
EVQADSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFDKALVLCQM
HNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEE
NCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSRQIEQDEQR
IQKYREETTRIRLEIEELKASPRIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDLPSGKTAATIEGGLQRELLMHTKRST
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctacctgcagtggcgccgcttcgtcttcttcgacagagagaccgtgagggag
ccggcggggccggatgggaccggcgcgaagcccttcgcgctgcccccgggcatcgcagtc
tgcgactcgggccggggaagcctcgtgttcggagatatcctgtgtcagatttggtttttg
cctcgctctcttcaactcagcagtttccaagcttacaagctaagggtaacgcatctgtac
cagctgaagcagcacagtatccttgtttctattggtgaggatgaagagggtattaatcct
ttggtgaaagtctggaacctggagaaacgagatggtggtaatcctctctgcacacgaatt
tttccagcaataccaggtaacaagcccacggttgtatcctgcctgactgtccacgagaat
cttaatttcatggctattggttttgcagatgggagtgttgtccttactaagggagacatc
acccgggatcggcacagtaagacccagatcctgcacgaaggcagttacccggttactggc
cttgcttttcgacagtctggcaaaacaacacatctctttgtggtgaccacagagaacatc
cagtcttatatgctttcagtgaaagactatcctcacctggagctggacactcacggctgt
ggattgcgctgttcatctatcagtgacccctcccaggatctgcagttcattgtggcagga
aatgaatgtgtgtacctttaccagccagacgaacgtggcccctgctttgccttcgaggga
cagaagctgattgttcactggtatcgaggatacctcatcattgtctccaaggaccgaaag
acttccccaaagtcagaattttcagggaacgaggcacagaattcagacaaacaagtcctg
aatatctatgacttgtgcaacaaattcattgcatacagttcaatctttgatgatatagtg
gatgtcttggcagagtggggttctctctatgtactgaccagagatgggaagatccatgta
ctgcaggagaaggatacacaaaccaaactcgagatgctgttcagaaagaacttatttgaa
atggccattaacctggccaagagccaccacttggacagcgatggtttgtcagagattttc
cggcagtacggcgatcatctctataacaagggaaaccatgatggagccatccagcagtat
atccgaactatagggaagctagaaccatcttatgttattcggaaattcctggatgctcag
cgtatccacaacctcactgcttatctacagatgctccacctgcagtccctggccaatgca
gaccacactacacttctgctgaattgctataccaaactcaaagacagctccaaactggaa
gagttcattaagacaagtgagagtgaggtccactttgatgtggaaacagctatcaaggtg
cttcgccaggctggttactactcccacgccgtgtacctggcagagaagcatgagcatcat
gaatggtacctcaaaatccagttagaggacatcaagaactaccaagaggctttgcactac
attggaaaactgccctttgaacaggcagagagtaacatgaagcgatatggtaaaatcctg
atgcaccatgtgcctaatgagaccactgagttgctgaagatcctttgcactgattaccgt
cccttgggagttaatgaaggccctgggatgctggaaggaaaaaaggctaattcagaggag
ttcatcccagtctttgcaaacaactcccgagaactgaaagcttttctggagcacatgact
gaggtgcaggctgactctccacagggtgtctatgacactttactggaacttcgattgcag
aactgggcacatgaacaagatgagcagatcaaggagaagttgcacaatgaagccctcacc
ctcctgaagagtgggaggttcaaaacggtctttgataaggccttggtcttatgtcagatg
cacaatttcaaggatggtgttctctacctctatgagcagggcaaacttttccaacagatc
atgcattaccacatgcagaatgagcagtacaagaaggtgattgaggtgtgcgagttgtat
ggcgaccaagaggcttgtctctgggaacaggcgcttggctactttgcacggaaggaggag
aactgcaaagagtatattgctgcagtgctgaaacacattgagaacaagaatcttatgcct
ccgctgcttgttgtgcagacgctggctcataactccacagccaccctgtctgtgatcaag
gattaccttgtcaacaagctgcagaagcaaagccgccagatagagcaggatgagcagaga
attcagaaataccgagaagaaactacaaggatccgcctggaaattgaagagctgaaagca
agtcctaggatttttcagaagaccaagtgtagcatttgcaccagtgcattggagcttcct
tcagtccacttcctgtgtggtcattcctttcaccagcactgctttgagagctactctgag
agtgattcagaatgtcccacctgcatgccagaaaatcgcaaagtgatggatatgatccga
gcccaggagcagaagagagatctccatgaccagtttcagcatcagctcaagtgttcaaac
gatggcttctcagtcgttgctgactactttggtcgcggtgtcttcaataagctcaccctc
atcacggacttgccctcgggaaagacggctgctacgatcgagggtggcctgcagcgggaa
ctgctcatgcacaccaagcgcagtacctga
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