Oenanthe melanoleuca (Eastern black-eared wheatear): 130262423
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Entry
130262423 CDS
T09236
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04270
Vascular smooth muscle contraction
oma04625
C-type lectin receptor signaling pathway
oma04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130262423 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130262423 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
130262423 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130262423 (ARHGEF12)
Membrane trafficking [BR:
oma04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130262423 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
130262423
NCBI-ProteinID:
XP_056365509
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All DBs
Position
24:2540524..2620806
Genome browser
AA seq
1491 aa
AA seq
DB search
MSGTQSTITDRFPLKKPSRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESKSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSDVDLAAFGHMSPIMASPHSP
GTSGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQFLQEEYSRTPSTRGLKEI
QEAKKHIPQLQEQLSKATGCSQDGLLSSRAVSESLQISEGEPDTGDSGSKLDFSGDSPSR
PNSDIADSPRSGLKERIYPDESPEKAELQDTDSQSSVGSPLSRVGTQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRAANLKVPVPDEISLELDRRRPEFLPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELTRLDAERLRDRNAVEKERSCAEQIIAKIEEVLMTSQPLEEDKSS
AMQCVILTYMKHLGVKVKEPRSLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILG
PPRRPSRHDSSAIGRAMEMQKPRHPKHSPTASSVSPEPPESSKTRQSGSSSDGTDAPYPP
ANPMSPLAVGPFASPEGSKDSDTGLKQPGEAPPASDSMDGTPRTPNTTFEFPSPLENLQE
EEGESERVVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDMDPPNWQQLVSREVLMGLKP
YEIKRQEVINELFYTERAHVRTLKVLHSVFYQRATREGILSSSDKRKIFSNLEDILGLHV
ALNDQMKSVRKRNETSVIGQIGEDLLSWFSGAAEEKLKLATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKA
ADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSATGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSSRRVI
PLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLMLNPQSSSPIMSEKAK
VEGLLGAEGQFEKVQQAELALKDSSSASVPEGQWAQDALRNLGLLRQLLEQQLGLAAPRS
PEQRRWQSPEPPAEQGGTAEPPAGHGPRTAECPAPGEPMQGAEPPARSALPMDSSSSELE
GLGAEEGGERFFDAREAHGDESPGESGKDEEELQIRISGNYLILDGYGAVQESSTDEEVS
ALVLQCTSHRQPPLDCPQQQQQQQQEQPLSPRDGSPFPEELLGSRWPGLEEPCPFLGSPQ
LPLQLRVQLLQYIHNIQHALEKLKEVEEDYSVLRRQGLAGSACTGEHSDKS
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaaccttcgagacat
ggcagcattctgagcagagagtctccagctgacaagaagcagaaggttgaacgctgcagc
agcacccacgacttcgatcccacagatagctcctccaagaagacaaagtctagttctgag
gagagtaaatccgagacgtatgggctggtgcagaggtgtgtggtgatccagagggatgag
aacggcttcgggctgacggtcagcggggacaaccccgtcttcgtgcagtctgtcaaggaa
gatggagcagccatgcgggctggagtgcagacaggtgatagaattatcaaggtgaacggg
actctggtaacacactccaaccatttggaggtggtcaagctgatcaagtcaggttcctat
gtagctctcactgtccaggggcgccccccagggtcgccccagatccccctggcggattct
gacgtggatctggcagcttttgggcatatgtctcccatcatggcatccccccactcacct
ggcacctcagggaatgcagagaggatcaccagccctgtgctcatgggggaggagaataac
attgtccacaaccagaaggtggagattctgaggaagatgctccagaaggagcaggagagg
ctgcagttcctgcaggaggagtacagcagaaccccctccacccgtgggctgaaggagatc
caggaggcaaagaaacacattcctcagctgcaggagcagctgtccaaggccacaggctgc
tctcaggatgggctcctgtcctccagggctgtgtcagagtcactgcagatcagcgagggg
gagccagacactggggacagtggcagcaaactggatttcagtggtgacagcccctccaga
cccaacagtgacattgctgatagtcctcgcagtggcctgaaggagaggatttatccagat
gagagcccagaaaaggctgagcttcaagatactgattcccagtccagtgttgggagtccc
ctgtcccgagtggggactcagatcattggagcagaggatgatgattttgacacagagcag
gagcagattaatgggcagtgcagctgcttccagaacatcgagctcctgaaatcccgcccc
gctcacctggctgttctcctgcaccacgtggtgtcccagtttgatcctgcagcactgctg
tgctacctttacacagacctgtacaaacagaccaactccaaagagacccggcgtgttttc
ctggagttttaccagttcttcctggacagagctgcaaacctgaaagtcccagttccagat
gagatctccttggaattagacaggagaaggccagagttcctccctgaagagctgcaccgc
cagttcatccagaccatgcaggataaagtctgtccagaggttcagaggaacctggaagat
ttcaggcagaagaggagcatggggctgaccctggccgagggggagctgacccggctggac
gccgagcggctccgcgaccgcaacgccgtggagaaggagaggagctgtgcagagcagatc
atcgccaaaatcgaggaggtcctgatgacatctcagcctctggaagaagacaagagctct
gccatgcaatgtgtgatcctcacctacatgaagcacctgggagtcaaagtcaaggagcct
cggagcctggagcagaagcggggcaggattggtttcctgccaaagatcaagcaaagcatc
aagaaagagaaagaaggagaggagaaagggaagaggagaggcttccccaacattctgggg
cccccgaggaggccgagccgacatgacagcagtgcaattggcagggccatggagatgcag
aagcccaggcaccccaagcactcacccacagcctcttctgtgagcccagagccccccgag
tccagcaagacgcggcagagcggctcctccagcgatggcacagacgccccttacccccct
gccaaccccatgtcccccctggcagtggggccctttgcctctccagagggcagcaaggac
agtgacacaggtttgaagcagcctggggaagctcctcctgccagtgactccatggatggc
accccccgcacacccaacaccacctttgagttcccatctcctctggaaaacctgcaggag
gaggagggagaatcagagagggtggtcgacatgggaaccccaaagcctttccgcaagatg
gacagtgttggctttgcagatgtgcagagtgaggatgagctctatgactttgacatggac
atggaccctcccaactggcagcagctcgtgagcagggaggtgctgatggggctcaagccc
tacgaaatcaagcgtcaagaagtgataaatgagctgttctacaccgagcgagcccacgtg
cgcacgctgaaggtcctgcacagcgtcttctaccagagagccaccagggagggcatcctc
agctccagtgacaagaggaaaatcttctccaacctggaggatatccttgggctgcatgtt
gcactgaatgatcagatgaaatctgtccgaaaaaggaacgagacttctgtcattggccaa
attggggaagatttgctctcctggttcagtggagcagcagaggagaagctgaaacttgcc
actgccaccttctgcagcaaccagcccttcgccctggaggtcatcaagtcccgccagaag
aaggactcgcgcttccagaccttcgtgcaggatgcagagagcaatcccctgtgccggcgg
ctgcagctcaaggatatcatccccacagagatgcagaggttgactaaataccctcttctg
ctggataacattgctaaatacacagagctgcctgaggagaaggaaaaagtgaagaaagca
gcagatcactgtcgccagatcctcaaccacgtgaaccaggctgtgaaggagtcagagaac
aagcagcacttggaggattaccagcggagactcgacctctcctacctgaagcagtcagag
gatcccatgatggacgagttcaggaacctggatctaacaaagagaaagatgctccatgaa
gggcccctgacctggaaagtgaatcgtgacaaaaccatcgatctgtacaccctgctgctg
gaggacatcctggtgctgctgcagaaacaagatgacaaattggtgctgaagtgccacagc
aagatcctggcatccacagctgacagcaaacacaccttcagccccatcatcaaactcaac
actgtgctggttcgccaggtggccacagataacaaagctttcttcgtcatctccatgtca
gcaacgggcgctcacatctacgagctggtggcacagactgtctctgagaagaatgtctgg
caggaccttatagctcagatggcaggaactgtgaagatggggagcagcaggagagtgatc
ccactgcctcagtcaggccctggagaagaggagcgtgaagaagaggagcagcagaagctc
aaagagcagcatgacattcctgccagcagcctgcaaagtccagataaagatttgggcctg
gagtctcccttgatgctgaaccctcagtcctcttcacccatcatgtcagagaaggccaag
gtggaggggctgctgggggctgaggggcagtttgagaaggtgcagcaggcagagctggca
ctgaaggactccagctcagcctcagtgccagaggggcagtgggctcaggatgccctgagg
aacttggggctgctgaggcagctgttggagcagcagctgggcctggccgccccgcggagc
ccggagcagcggcgctggcagagcccggagccgccggcggagcagggcggcaccgcggag
ccgcccgcggggcacggcccccggactgcagagtgcccggccccgggggagcccatgcag
ggcgcggagcccccggccaggagcgccctgcccatggacagcagcagctccgagctggag
gggctgggcgccgaggagggcggagagcggttcttcgacgctcgggaggcgcacggcgac
gagagccccggcgagagcggcaaggacgaggaggagctgcagatccgcatctcaggaaat
tatctgatcctcgacggctacggggcggtgcaggagagctccacggacgaggaggtgtca
gccctggtgctgcagtgcacctcccacaggcagccccccctggactgtccccagcagcag
cagcagcagcagcaggagcagcccctgtcccccagggacggctctcccttccccgaggag
ctgctgggctcgcgctggccggggctggaggagccctgccccttcctgggcagcccccag
ctgcccctgcagctccgagtgcagctcctgcagtacatccacaacatccagcacgccctg
gagaagctaaaggaggtggaggaggattacagcgtcctgcggcgccaggggctggctggc
tcagcctgcacaggagagcactcagacaaaagctag
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integrated database retrieval system
