Oenanthe melanoleuca (Eastern black-eared wheatear): 130262603
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Entry
130262603 CDS
T09236
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130262603 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oma04147
]
130262603 (COPA)
Membrane trafficking [BR:
oma04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
130262603 (COPA)
Exosome [BR:
oma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130262603 (COPA)
Exosomal proteins of bladder cancer cells
130262603 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
130262603
NCBI-ProteinID:
XP_056365900
LinkDB
All DBs
Position
25:complement(2617152..2674246)
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLSSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPAEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMLVFKLERERPALAVHGNSLFYVKDRFLRQLDFSSSRDVAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVPVPNCDEIFYAGTGNLLLRDADGVTLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAILICNRKLESLCQIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTSGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFRFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQRKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKGCWEKLGEVALLQGNHQVVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILRNCGQKSLAFLTAATHGLDEEAESLRESFDP
EKETIPAVDPEARLLQPPAPVLPLDTNWPLLTVSKGFFEGSIAGKGKGGALAADIDMDTV
GTEGWGEDAELQLDEDGFVDAGEGFGEEGTGKGQEEGGGWEVEEDLDLPPELDVPAGPAG
AAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFM
QTFSRGRTTFQALPSLPAMYGFPHRNWKEAGLKNALPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRLILLSVPLLVVDNKQEIAEAQQLVAICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKSAATFARRLLELGPKPEVAQQ
TRKILAACEKNPVDSHQLNYDQHNPFDICAASFRPIYRGKALERCPLSGACYSPEFRGQI
CRVTTVTEIGKDVLGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaaattcgagaccaaatcggcgcgggtgaaagggctgtcattccaccccaag
cggccctgggtgctgagcagcctgcacaacggggtgatccagctctgggactaccgcatg
tgcaccctcatcgacaagttcgacgagcacgatggacctgtcagagggatcgatttccac
aagcagcagccgctctttgtgtcggggggggatgactacaaaatcaaggtgtggaattac
aaactgaggcgctgcctcttcaccctgctggggcacctggattacatcaggacaaccttc
ttccaccacgaatatccctggatcctgagtgcttctgatgaccaaaccatccgagtatgg
aactggcaatccaggacctgtgtctgcgtgctgacaggacacaaccactacgtgatgtgt
gcccagttccaccctgccgaggacctggtggtgtcggccagcctggaccagactgtcagg
gtgtgggacatctccgggctcaggaagaagaacctgtccccgggggcggtggagtcggac
gtgcgcggcatcaccggcgtcgacctgttcggcaccaccgacgccgtggtgaagcacgtc
ctggagggccatgacaggggggtgaactgggctgccttccacccctccatgcctctcatc
gtctcgggcgccgacgatcgccaggtgaagatctggaggatgaacgaatccaaggcctgg
gaggtggacacctgccgtggccactacaacaacgtttcgtgcgccgtgttccacccgcgc
caggagctgatcctcagcaactcagaggacaagagcatcagggtgtgggacatgtccaag
cgcaccggagtccaaacgttccggcgcgaccacgaccggttctgggtgctggcagcacat
cccaacctcaacctgttcgctgctggacacgatggggggatgctggtgttcaagctggag
cgggagcggccggcgctggccgtgcacgggaactcgctgttctacgtcaaggatcggttc
ctgcggcagctcgacttcagcagctcccgggacgtggccgtgatgcagctgcgcagtggt
tccaagttcccggtgttcagcatgtcctacaaccctgctgagaacgctgtgctgctctgc
actcgagccagcaacctggagaacagcacctatgacctgtacaccattcccaaggatgca
gattcccaaaatcccgatgcccccgaggggaagcgctcctcggggctcacggccgtgtgg
gtggcgcggaaccgattcgcggtgctggacaggatgcactcgatcctgatcaagaacctg
aagaacgagatcaccaagaaggttccggttcccaactgcgacgagattttctacgcgggc
accgggaacctcctgctgcgcgacgccgacggcgtgacgctgttcgacgtgcagcagaaa
cggactttggcctcagtgaagatctccaaggtgaaatatgtgatctggtctgctgacatg
tcccacgtggcactgctggccaagcacgccatcctgatctgtaaccgcaagctggagtct
ctgtgccagatccacgagaacattcgggtcaagagcggcgcctgggacgagagcggcgtc
ttcatctacaccacgtccaaccacatcaaatacgccgtcacctcgggggatcatggcatc
atccgcaccctggacctgcccatctacgtgacgcgggtcaaggggaacaacgtttactgc
ctggaccgggagtgccggccccgcgtgctcaccatcgaccccaccgagttcaggttcaaa
ctggccctcatcaacaggaaatatgatgaggtgctgcacatggtgaggaacgccaagctg
gtggggcagtccatcatcgcctacctgcagcgcaaggggtaccccgaggtggcgctgcac
ttcgtcaaggacgagaaaacgcgcttcagcctggccctggagtgcggcaacatcgagatc
gccctggaggcagccaaggctctggacgacaagggctgctgggagaagctgggtgaggtg
gctctgctgcaggggaaccaccaggtggtggagatgtgctaccagcgcaccaagaacttc
gaccgcctctccttcctctacctcatcaccggcaacctggagaaactccgcaagatgatg
aagatcgcggagatccggaaggacatgagcgggcactaccagaacgcgctgtacctgggc
gacgtggccgagagggtgcggatcctgcgcaactgcggccagaagtccctggcgttcctg
acggccgccacgcacgggctggacgaggaggccgagagcctgcgggaatccttcgatccc
gagaaagagacgatcccagccgtggatcccgaggcgcggctgctgcagcccccggccccg
gtgctgcccctggacaccaactggcccctcctgaccgtgtccaaaggattcttcgagggc
tccatcgctggaaaagggaaaggaggagccctggctgctgacatcgacatggacaccgtg
ggcaccgagggctggggcgaggacgccgagctgcagctggatgaagacggattcgtggat
gctggggaaggattcggagaggaaggaacgggaaaagggcaggaggaaggaggaggatgg
gaagtggaagaggatttggatcttccccccgagctggatgtccctgctggccctgcagga
gcggctgaggacggattcttcgtgccccccaccaaaggcaccagcccagcccaggtgtgg
tgcaacaactcccagctccctgtggatcacatcctggcaggatccttcgagacagccatg
aggctgctccatgaccaggtgggagtgaccaactttggcccctacaagcagctcttcatg
cagaccttctcccgaggccggacgacattccaggctcttcccagcctccctgccatgtat
ggattcccacaccgcaactggaaggaggccgggctgaagaacgcgctgccggccgtgggg
ctgaagctgaacgatctgatccagcggctgcagctctgctaccagctgaccacggccggg
aagttcgaggaggccgtggagaaattccggctgatcctgctcagcgtgcccctgctggtg
gtggacaacaagcaggagatcgccgaggcacagcagctggtcgccatttgccgggaatac
atcgtgggattgtccatggagatcgagaggaagaaactgcccaaggagacactggagcag
cagaaaaggatctgtgagatggctgcctacttcacacactccaacctgcagcccgtgcac
atgatcctggtgctccgcaccgccctcaacctcttcttcaaactcaagaacttcaaaagc
gccgccaccttcgcccggcgcctgctcgagctcggccccaagcccgaggtggcccagcag
acgcggaagatcctggcggcgtgcgagaagaaccccgtggacagccaccagctcaactac
gaccagcacaaccccttcgacatctgcgccgcctccttccgccccatctaccgcggcaag
gccctggagcgctgccccctcagcggcgcctgctacagccccgagttccgcgggcagatc
tgccgcgtcaccacggtgacggagatcggcaaggacgtgctggggctgcgcatcagcccc
ctgcagttccgctag
DBGET
integrated database retrieval system
