Oenanthe melanoleuca (Eastern black-eared wheatear): 130262811
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Entry
130262811 CDS
T09236
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130262811 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oma03400
]
130262811 (APEX1)
Enzymes [BR:
oma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
130262811 (APEX1)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
130262811 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
130262811
NCBI-ProteinID:
XP_056366264
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All DBs
Position
25:3609205..3617505
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AA seq
303 aa
AA seq
DB search
MPKRGKKKEESGSGDEAVPAKAPKAGPAPPYEDPPTREATPEGRRWTLKVTSWNVDGLRA
WVRKGGAKWVQEEAPDVLCLQETKCAGAAVPPEVRALPGLPHQFWSSAKERPGYSGVGLL
ARTEPLEVTYGIGDPEHDADGRVLTAEFPSLFVVCAYVPNAGRGLARLEPRLRFDAAFLS
FLRRLDARKPVLLCGDLNVAHAEADLCHPRANRASPGFTPQEREGFSRLLGAGFVDSFRH
LYPEARGAFTFWTYLGGARARNVGWRLDYAVLSRRLLGALCDSKIRSAVMGSDHCPITAL
LAV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgcgggaagaagaaggaggagagcggcagcggggacgaggctgttcccgcc
aaggcgcccaaggcggggccggccccgccctacgaggacccgcccacccgcgaggccacg
cccgaggggcggcgctggacgctcaaggtgacctcgtggaacgtggacgggctgcgggcc
tgggtgcgcaagggcggggccaagtgggtgcaggaggaggcccccgacgtgctgtgcctg
caggagaccaagtgcgcgggcgcggcggtgccgcccgaggtgcgggcgctgccggggctg
ccgcaccagttctggagcagcgccaaggagcgcccgggctacagcggggtggggctgctg
gcccggacagagcccctggaggtgacctatggcatcggcgaccccgagcacgacgccgac
ggccgcgtgctgacggccgagttcccgtcgctcttcgtggtgtgcgcctacgtgcccaac
gccggccggggcctggcgcggctggagccgcggctgcgcttcgacgccgccttcctgtcc
ttcctgcgccgcctggacgcgcgcaagccggtgctgctgtgcggcgacctcaacgtggcg
cacgccgaggccgacctgtgccacccgcgcgccaaccgcgccagcccgggcttcacgccg
caggagcgcgaggggttctcgcggctgctgggcgccggattcgtcgactccttccggcac
ctgtacccggaggcgcgcggcgccttcaccttctggacctacctgggcggcgcgcgggcg
cgcaacgtgggctggcggctggactacgccgtgctgtcccggcgcctgctgggggcgctg
tgcgactccaagatccgcagcgccgtgatgggcagtgaccattgccccatcaccgccctg
ctggctgtctag
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