Oenanthe melanoleuca (Eastern black-eared wheatear): 130262918
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Entry
130262918 CDS
T09236
Symbol
HCFC1
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1
KO
K14966
host cell factor 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03083
Polycomb repressive complex
oma04980
Cobalamin transport and metabolism
oma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130262918 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
130262918 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130262918 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oma01009
]
130262918 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oma03036
]
130262918 (HCFC1)
03029 Mitochondrial biogenesis [BR:
oma03029
]
130262918 (HCFC1)
Protein phosphatases and associated proteins [BR:
oma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130262918 (HCFC1)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
130262918 (HCFC1)
HMT complexes
COMPASS/SET1 complex
130262918 (HCFC1)
MLL-HCF complex
130262918 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130262918 (HCFC1)
Mitochondrial biogenesis [BR:
oma03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
130262918 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
130262918
NCBI-ProteinID:
XP_056366399
LinkDB
All DBs
Position
25:complement(7066166..7108096)
Genome browser
AA seq
2171 aa
AA seq
DB search
MAGLGGGGSPPRAPPGPPALQPRWKRVVGWAGPVPRPRHGHRAVAIKELIVVFGGGNEGI
VDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQA
SRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYV
LELRPGSGVLAWDIPITYGVLPPPRESHTAVVYTERDGRRSRLVIYGGMSGCRLGDLWTL
DIETLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNT
LACLNLDSMAWEPLVLETLEDNVPRARAGHCAVAIATRLYIWSGRDGYRKAWNNQVCCKD
LWYLETERPPAPGRVQLVRANTTSLEVSWGAVPTADSYLLQLQKYELPAAPAPPPVPSVP
ANPPKSPAPAAPAPPPAPPSALPQLGGVGLTLLSPPPAAPPNPPAVPAGTGTGAAGTAAA
AAAGGTGGAVGAPPPSTTLQVLPAAAGGATAAAAAAGSGAATAGRAPGVPAVLKVTGPPA
ATAGPPLVTVRSAAPGKAPVTVTSLPAGVRMVVPTQSPQGTVIGSSPQMSGMAALAAAAA
ATQKIPPASAPTVLSVPAGATIVKTVAVTPGATTLPATVKVASSPVMVSNPATRMLKTAA
AQVGTAGASPAATNAATRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPISVPG
GSALISNLGKVMSVVQTKPVQSSAVTGQASSGPVTQIIQTKGPLPAGTILKLVTSGEGKP
TTILTSTQAGAGAAKPPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQSGATGVTSSPG
IKSPITIITTKVMTSGTGTPAKIITAVPKLGGGHGQQGVTQVVLKGAPGQPGTILRTVPM
GGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGAGGHSATASLATPI
TTLGTIATLSSQVLNPAAITATAAGGGLGTPTITMQPVSQPTQVTLITTPSGVEAQPVHD
LPVSILASPTAEAPPAATSSEATPPGAEATAGTVTLVCSNPPCETHETGTTNTATTSLVA
NVGTGGGQQLLCEDTGGGTALAAPPRACSNPPCETHDTGTTNTATTASGGPPCPCPTQQT
VATGTTMTARLCPPPAEGGGKCQTQEVTVAVTTPCQTPWGQPEVGTATSAVGVATSSSTS
GETPVGTRLCSNPGTTSTVTVTGSQFCSNPPCETHETGTTNTVTVTGSQFCSNPPCETHE
TGTTNTVTTTGTRFCSNPPCETHETGTTNTVTTAGTRLCSNPPCETHETGTTNTVTTTAP
RPPCANPPCETHETGTTNTVTTTGTRLCSNPPCETHETGTTNTVTTTGTRLCSNPPCETH
ETGTTNTATTTTATSGSGTSVPPPRGVPPCANPPCETHETGTTNTVTMTSSQLCSNPPCE
THETGTTNTATTATAGSRQGDTTTATSAATTSGTGGSPPCAGTPEGSGATSAGSPPCQSH
QGAATTSSEGVTTPPPCATSATSPPRACSNPPCETHETGTTATATTVTASMGASQDPPPP
AANGQGEGEAPPSEGGGPPVPPGTPSPGPSGSGTPQPRAVTTVTQSTPAPGPAVPTISSL
TESPPAPPETPPTATPTPPADPHPPQDPPPAPGAAPSPSPPAAPAEPAPGSPQPLAVVVL
PPAAEPPPAEGLALPPELLAEAGGAGGAPPGLTPEELAVTAAAEAAAAAAASEEAQAQAL
AIQAVLQAAQQAVMGTSEPLEPGEPGGGAPLIWGAPWGSRRRRGARGGAAPGADPAGTGG
AGAAPAAPGRDRRPPPPPPRPPRPSAPPPPAPSAAPPAAAPPPHLPTEALAPADSLNDPA
GEGDSNGLGELGAAPGGGTPGSLLPPPGDGLAPSSAFVAPPGPAVAPSPAKLQAAAALAE
VANGIESTPVKPEPGAPPKALPKKENQWFDVGVIKGTTMMVTHYFLPSEDGTAADDEASG
VPDHSQLRRQELQPGTAYKFRVAGLNACGRGPFSELSAFKTCLPGFPGAPCAIKISKSPD
GAHLTWEPPSVTSGRIAEYSVYLAIQGGPGGGPEARGGGAQLAFMRVYCGPSPSCLVPAS
SLASAHIDHTTKPAIIFRIAARNDKGYGPATQVRWLQESSKDGGAGKPGSKRPLASPDLK
SAPKKPKAEGQ
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctgggcggggggggctccccgccgcgggcccccccgggcccccccgcgctg
cagccgcgctggaagcgggtggtgggctgggccgggcccgtgccccgcccccggcacggc
caccgcgccgtggccatcaaggagctcatcgtggtcttcggggggggcaacgagggcatc
gtggatgagctgcacgtctacaacacagccaccaaccagtggttcatcccggccgtgcgc
ggggacatccccccgggctgcgccgcctacggcttcgtgtgcgacgggacgcggctgctg
gtgttcgggggcatggtggagtacggcaagtacagcaacgacctctacgagctgcaggcc
tccaggtgggagtggaagcggctgaaggcgaagacccccaaaaacgggccccccccttgt
ccccggctgggccacagcttctccctggtgggcaacaagtgttacctgttcggggggctg
gccaacgacagcgaggaccccaaaaacaacatcccccggtacctgaacgacctgtacgtg
ctggagctgcggccgggctcgggggtgctggcctgggacatccccatcacctacggggtg
ctgccgccgccgcgcgagtcgcacacggccgtggtgtacacggagcgcgacgggcggcgc
tcgcggctcgtcatctacgggggcatgagcggctgcaggctgggggatttatggaccctg
gatatcgagacgctgacctggaacaagcccagcctgagtggggtcgctcccctcccccgc
agcctccactcggccaccaccatcggcaacaagatgtacgtttttggggggtgggtgccc
ctggtgatggatgacgtcaaggtggcgacgcacgagaaggagtggaagtgcaccaacacc
ctggcctgcctgaacctggactcgatggcctgggagccgctggtgctggagacgctggag
gacaacgtgccgcgggctcgcgccgggcactgcgccgtggccatcgccacgcgcctctac
atctggagcggccgcgacggctaccgcaaggcctggaacaaccaggtgtgctgcaaggac
ctctggtacctggagacagagcgccccccggccccgggccgcgtgcagctggtgcgggcc
aacaccacgtcgctggaggtgagctggggcgcggtgcccacggccgactcgtacctgctg
cagctgcagaagtacgagctgcccgccgcgcccgcgccgccgcccgtgccctcggtgccc
gccaacccccccaagagccccgcgcccgccgcgcccgccccgccgcccgcgccccccagc
gccctgccccagctggggggcgtggggctcaccctgctgtcccccccgcccgccgcgccc
cccaacccgcccgcggtgccggcggggacgggcacgggcgcggcggggacggcggcggcg
gcggcggcgggggggacggggggggccgtgggggctcccccgcccagcaccaccctgcag
gtgctgcccgcggccgcggggggcgccacggcggcggcggctgcggcggggagcggagcg
gcgacggcggggagggcacctggtgtcccggccgtgctgaaggtgaccggtccccctgcg
gccaccgcggggccaccgctggtcaccgtgcgctcggccgcgcccggcaaggcgccggtg
acggtgacatcgctgccggccggcgtcaggatggtggtgcccacacagagcccccagggc
acggtgatcggcagcagcccgcagatgagcggcatggccgccctggccgccgcggccgcc
gccacgcagaagatcccgccggcctcggcgcccaccgtgctcagcgtccccgccggcgcc
accatcgtcaagacggtggccgtgacccccggggccaccaccctgcccgccaccgtcaag
gtggcatcgtcacctgtcatggtgagcaaccccgccacgcgcatgctgaagacggcggcc
gcccaggtgggcacggcgggggcgtcgcccgcggccaccaacgcggccaccaggcccatc
atcaccgtgcacaagtccggcacggtgacggtggcccagcaggcccaggtggtcaccacc
gtggtcggaggggtcaccaagaccatcacactggtcaagagccccatctccgtgccgggg
ggcagcgccctgatttccaacctgggcaaggtgatgtcggtggtgcagacgaagccggtg
cagagctcggccgtgaccgggcaggcgtccagcgggcctgtcacccagatcatccagacc
aagggccccctgcccgccgggaccatcctgaagctggtgacgtcgggggaggggaagccc
accaccatcctgaccagcacgcaggcgggggcgggggcggccaagccccccaccatcctg
ggcatcagcagcgtgtcccccagcaccaccaagcccgggaccaccaccatcatcaaaacc
atccccatgtcggccatcatcacccagtcgggggctacgggtgtcaccagcagccccggg
atcaagtcccccatcaccatcatcaccaccaaggtgatgacctcgggcaccgggaccccc
gccaagatcatcacagccgtgcccaagctgggcggggggcacggccagcagggcgtgacg
caggtggtgctcaagggcgccccgggccagccggggacgatcctgcggacggtgcccatg
ggcggggtccggctggtcactcccgtcaccgtctcggccgtcaagcccacggtgaccacc
ctggtggtcaagggcaccaccggtgtgaccacgctggggacagtgacagggacagtgtcc
accagcctggccgggggcgcgggtggccacagcgccacggcctcgctggccacgcccatc
accaccctggggacaatcgccaccctgtcgagccaggtgctgaacccggcggccatcacg
gccaccgcggccgggggtggcctggggacacccaccatcaccatgcagccggtgtcccag
cccacgcaggtgaccctgatcaccacgcccagcggggtggaggcccagcccgtccacgac
ctccccgtgtccatcctggcctcgcccacggccgaagcccctcccgcggccacctcgagc
gaggccaccccccccggggccgaggccaccgcgggcaccgtcaccctggtgtgctccaac
cccccctgcgagacccacgagacggggaccaccaacacggccaccaccagcctggtggcc
aacgtggggacgggggggggacagcagctgctgtgcgaggacacgggcggggggacggcg
ctggcagcgcccccccgcgcctgctccaaccccccctgcgagacccacgacacggggacc
accaacacggccaccacggccagcgggggcccgccctgcccctgccccacgcagcagacg
gtggccacggggacaacgatgacggcgcggctgtgcccgccccccgccgagggcggtggc
aagtgccaaacgcaggaggtcaccgtcgccgtcaccaccccgtgccaaacgccctggggg
cagcccgaggtggggacggccaccagcgcggtcggtgtggccaccagcagcagcacgagc
ggtgagacacccgtggggacacggctgtgctccaacccggggacaaccagcacggtgacg
gtgacagggtcacagttctgctccaatccaccctgtgagacacacgagacggggacaacc
aacacggtgacggtgacagggtcacagttctgctccaacccaccctgtgagacacacgag
acggggacaaccaacacggtgacaacgacagggacaaggttctgctccaaccctccctgt
gagacacacgagacggggacaaccaacacggtgacaacagcggggacacggctgtgctcc
aaccctccctgtgagacacacgaaacggggacaaccaacacggtgacaacgacagcgcca
cggccaccctgtgccaaccctccctgtgaaacccacgaaacggggacaaccaacacggtg
acaacgacggggacacggctgtgctccaacccgccctgtgagacacacgaaacggggaca
accaacacggtgacaacgacggggacacggctgtgctccaaccctccctgtgagacacac
gaaacggggacaaccaacacggccaccaccaccacggccacctcagggtcggggacatcg
gtgccacccccccgaggcgtccccccctgcgccaaccccccctgcgagacgcacgagacc
ggcaccaccaacacggtgacaatgacatcgtcacagctctgctccaacccgccctgcgag
acccacgagacggggacgaccaacacggccaccacggccaccgcggggtcgcggcagggt
gacaccaccacggccaccagcgccgccaccacctccggcacgggggggtccccgccttgt
gccgggacccccgagggcagcggggccaccagcgcggggtccccgccctgccagagccac
cagggcgcggccaccaccagcagcgagggggtgacgacgcccccgccctgtgccaccagc
gccaccagccccccccgcgcctgctccaaccccccctgcgagacccacgagacggggaca
acggccacggccaccacggtcaccgccagcatgggcgccagccaagaccctcccccgccg
gctgccaacgggcagggggagggggaggccccccccagcgagggtgggggtccccctgtc
ccccccgggacccccagccccggccccagcggctccgggaccccccagccccgggcggtc
actacggtcactcagtccacgccagcgccggggccggccgtgccgaccatctcgtcgctg
accgaatcccccccagcacccccggagacccctcccaccgccacgcccaccccccccgcg
gacccccacccaccccaggacccccccccggcccccggcgccgccccctccccgtcgccc
cccgcggccccggccgagcccgcgcccggctccccgcagccgctggccgtggtggtgctg
ccgccggccgccgagccccccccggccgaggggctggcgctgccccccgagctgctggcc
gaggcggggggcgcggggggggcgcccccggggctgacccccgaggagctggcggtgacc
gcggcggccgaggcggcggcggcggctgcggccagcgaggaggcgcaggcacaggccctg
gccatccaggccgtgctgcaggcggcccagcaggcagtcatgggcacctcggagccgctg
gagcccggcgagcccggggggggggcccctctgatttggggggcgccctgggggtcccgg
aggcggcggggggcgcgggggggcgctgcccctggtgctgacccagcaggaactggcggc
gctggtgcagcaccagcagcacctggccgagaccgccgcccccccccgccgcccccccgc
cccccccgcccctccgccccgcccccccccgcccccagcgccgcccccccggcggccgcg
ccccctccccacctgcccaccgaggctctggcccccgccgacagcctcaacgaccccgcg
ggggagggggacagcaacgggctgggggagctgggggcagcacccggggggggcaccccc
ggcagcctcctgcccccccccggggacggtctggccccctcgagcgccttcgttgccccc
ccgggccccgcggtcgcccccagcccggccaagctgcaggcggccgcagccctggccgag
gtggccaacggcatcgagagcacccctgtgaagccggagccgggggcgccacccaaggcg
ctgcccaagaaggagaaccagtggttcgacgtgggggtcatcaagggcacgaccatgatg
gtcactcactacttcctgcccagcgaggacgggacggcggctgatgacgaggcctcgggg
gtcccggatcactcccagctgcgccgccaggagctgcagccgggcacggcgtacaagttc
cgcgtggccgggctcaacgcctgcggccgcgggcccttctcggagctgtcggccttcaaa
acctgcctgcccggcttccccggggcgccctgcgccatcaagatcagcaagagcccggac
ggcgctcacctgacgtgggagccgccctcggtgacgtcgggccgcatcgccgagtactcg
gtgtacctggccatccagggggggcccggggggggccccgaggcccgcggggggggggcc
cagctggccttcatgagggtctactgcgggcccagcccctcgtgcctggtgccggcctcc
agcctggccagcgcccacatcgaccacaccaccaagccggccatcatcttccgcatcgcc
gcgcgcaacgacaagggctacggcccggccacgcaggtgcggtggctgcaagagtcgagc
aaggacggaggcgccgggaaaccgggcagcaaacggccgctggcatcgcccgacctgaaa
tccgctccaaagaagcccaaggccgaagggcagtga
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