Oenanthe melanoleuca (Eastern black-eared wheatear): 130262927
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Entry
130262927 CDS
T09236
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04120
Ubiquitin mediated proteolysis
oma04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130262927 (SYVN1)
04120 Ubiquitin mediated proteolysis
130262927 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oma04121
]
130262927 (SYVN1)
Enzymes [BR:
oma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130262927 (SYVN1)
Ubiquitin system [BR:
oma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130262927 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
130262927
NCBI-ProteinID:
XP_056366409
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All DBs
Position
25:complement(7717585..7732399)
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AA seq
613 aa
AA seq
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MLCTALVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMLLLGVLDLLFVSHAYHSILTRGASVQLVFGFEYAI
LLTMVLTIFIKYVLHSIDLQNENPWDNKAVFMLYTELLTGLIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASAPAPAPAAPEAPAPAPAGGAAAA
GGAQGPHNFPQGLLPPFPPGMFPFWPPVGPFPPVPGAQPPPGAGAGAGGGAEGAASTAGS
AAGSRAGDAGAGPSSGSGASSVPEPGAAGAVPGLPLPPPWVGMAWPPLFGSVPLPRRAPP
MPVPPAGFAGLTEEELRALEGHERQHLEARLQCLHNIHTLLDAAMLQINQYLGVLGAIGT
PRAAPRPPPPREAPPEEPPAPGPSGATGATEPAPPEDEEDEGPEPPEGPDTAELRRRRLQ
RLGTPPSDPPKKH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcacagctctggtcatggctggcagcctggctctcaccacggccgtggttgcc
cacgcctattacctgaagcaccagttctaccccaccgtggtgtacctcaccaagtccagc
cccagcatggccgtgctgtacatccaggcctttgtgctggtcttcctgctgggcaagttc
atgggcaaggtgttcttcgggcagctgcgggcggctgagatggagcacctcctggagcgc
tcgtggtacgcggtgaccgagacctgcttggccttcaccgtcttcagggacgacttcagc
ccgcgcttcgtggccctcttcaccctcctcctcttcctcaagtgcttccactggctggct
gaggacagggtggattttatggagaggagcccgaacatctcgtggctcttccacttccgc
atcgtctccctgatgctgctgctgggggtgctggacctgctgtttgtgagccatgcctac
cacagcatcctgacccgcggcgcctccgtgcagctcgtcttcggcttcgagtacgccatc
ctgctgaccatggtgctgaccatcttcatcaagtacgtgctgcactccatcgacctgcag
aacgagaacccctgggacaacaaggccgtgttcatgctctacaccgagctgctcactggg
ctgatcaaggtgctgctctacatggccttcatgaccatcatgatcaaggttcacaccttc
ccgctcttcgccatccgccccatgtacctggccatgaggcagttcaagaaggccgtgacc
gacgccatcatgtcccgccgggccatccgcaacatgaacacgctctaccccgacgccacg
gccgaggagctgcaggccatggacaacgtgtgcatcatctgccgcgaggagatggtgaca
ggggccaagcgcctgccctgcaaccacatcttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgccccacgtgccgcatggacgtgctgagagcctcggcaccggca
ccggcaccggcagcgcccgaggcaccggcaccggcacccgcggggggggcggcggcggcg
gggggggcgcagggaccccacaacttcccccaggggctcctccctcccttccccccgggc
atgttcccgttctggccgcccgtggggccgttcccgcccgtgcccggagcgcagcccccg
cccggggctggagctggagctggaggtggagccgagggcgcggccagcacggccggcagc
gctgccggttcccgtgccggtgacgccggtgccggtcccagttctggttctggtgccagt
tcagtgccggaaccgggcgctgccggggccgtgccggggctgccactgcccccaccctgg
gtggggatggcctggccacccctgttcgggtctgtgcccctccccaggcgtgcccccccc
atgccggtgccccccgccggcttcgcggggctgacggaggaggagctgcgggcgctggag
gggcacgagcggcagcacctggaggcgcggctgcagtgcctgcacaacatccacacgctg
ctggacgcggccatgctgcagatcaaccagtacctgggcgtgctgggcgccatcgggacc
ccccgagccgcccctcggccgccccccccccgtgaggcccccccagaggagcccccggcc
ccaggaccctcgggagccactggagccactgagccggcgccccccgaggatgaggaggac
gaaggccccgagccccccgagggccccgacacggccgagctgcggcggcggcggctgcag
aggctggggaccccccccagcgaccccccaaaaaaacactga
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