KEGG   Oenanthe melanoleuca (Eastern black-eared wheatear): 130263664
Entry
130263664         CDS       T09236                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
oma  Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:oma00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oma01009]
    130263664 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oma03036]
    130263664 (KDM5B)
Enzymes [BR:oma01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     130263664 (KDM5B)
Protein phosphatases and associated proteins [BR:oma01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130263664 (KDM5B)
Chromosome and associated proteins [BR:oma03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130263664 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 PHD_5
Other DBs
NCBI-GeneID: 130263664
NCBI-ProteinID: XP_056367316
LinkDB
Position
26:5072561..5127519
AA seq 1518 aa
MAEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEQGG
FDVVCKERKWTKIATRMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLCLQKPDLSSD
TKDKEYKPHDIPQRQSVAPSESCPPARRAKRLSPEATNVKSETDPPEARTHNLRRRMGCA
PPKSEGDKEMRSVVKLPEKKELPGEPEKDKSKVRSKKPTNAVDLYVCLLCGSGNDEDRLL
LCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGEM
ADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRGGKF
KVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWS
YSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHG
VPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYC
VFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEEEKRLREKVDKLGVTDSERVTFELF
PDDERQCLKCKTTCFMSAVYCPCKPGLLVCLYHIEDLCSCPTYKYKLGYRYTLEELYPMM
DALKMRAESYNEWASNVSEALEAKINNKKSLISFKALIEESEMKKFPDNDLLRHLRLVTQ
DADKCASVAQQLLNGKRQTRYRSGGGKCQNQLTVNELRLFVRQLYALPCVLSQTPLLKDL
LDRVEAFQQQSQKLLSEETPSAAELQELLDVSFDFDVELPQLAQLRTRLEQARWLQDAQL
GCSERGALTLDHMRRLIDSGVGLAPCPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ
SLSSLAAAVKELEEIPAYLPNGAALKDAVQKAKDWLQEVEALQVGGRVPVLDTLAELVTR
GRSIPVHLDYLPRLEALVAEVQAWKECAANTFLCENSPYSLLEVLCPWCDIGMLSLKRKQ
KKLKEAVPSGKKKSTKLETLSDLERALSESKDTASAMATLGEARLREMEALRALRAANEA
KALAGEEDAELKVCLCQKEPAPPMLQCELCRGFFHSGCVPAAGAPGPRGVWLCPLCRRSQ
KPPLEKVLPLLAALQRIRVRLPEGDALRYVIERTVNWQHRAQQMLYSGNLKRIQDKVGSG
LLYSRWQASAGQLPETNKVSQTIGAMSFSMPHDWDNRSMYLHSPFSTGQHCIPLHVISTE
LDELMMEAQLLQVSLPEIQELYQALFTKQSPALQPEQRSPSTATSEKNECCRGKKDGMSY
MERKLKRRFERENFCGEKRARVKKMRTPKKKKLRLSPSKDQCSNKAERERLQEPQRCSDS
PSLPSDSFSEQEDSEDEDAICPAVNCLQPEGDEVDWVQCDGSCNQWFHQVCVGISPEMAE
KEDYICASCAGKDAPCRK
NT seq 4557 nt   +upstreamnt  +downstreamnt
atggccgagttcctgcccccgcccgagtgccccgtcttcgagcccagctgggaggagttc
gccgaccccttcgccttcatccacaagatccggcccatcgccgagcagaccggcatctgc
aaggtgcggccgccgccggactggcagcctccattcgcgtgcgatgtcgacaagcttcac
ttcacaccaaggatccagaggctcaatgaactggaggcccaaactcgtgtaaagctgaat
tttctggaccagattgcaaagttttgggagcttcaaggatgcacactgaaaattccacac
gtggagaggaagatcttggatttatttcagcttaacagactagttgcagaacaaggagga
tttgatgtggtttgcaaggagaggaaatggaccaagattgccacgaggatgggctttgct
cctggcaaggccgtgggctcgcacatccgcgcgcactacgagcggatcctctacccctac
aacctgttccagtcaggagccagtctcttgtgcttgcagaagccagatctgagcagtgac
acgaaggacaaggagtacaagccccacgacatcccgcagcgacagtcggtggcgccgtcc
gagagctgcccgcccgcgcggcgcgccaagcgcctgagccccgaggcaaccaatgttaaa
agtgagactgatcctccagaagccagaactcacaatctgagacgcagaatgggctgtgcc
cctccaaagagtgaaggtgacaaggaaatgcgcagtgtggtgaaactccctgagaagaaa
gaacttcctggggagccagagaaggacaaatccaaagtcagatctaaaaaacctaccaat
gctgtggatctgtatgtgtgtctcctgtgtggcagtggcaatgatgaggacagactcctg
ctgtgtgacggctgtgatgacagttaccacaccttctgcttaattccacccctccatgat
gttcccaaaggggattggaggtgtcctcagtgtctggctcaggagtgtaacaagcctcaa
gaagcctttgggtttgaacaagcagcacgagactacaccctccgcacctttggggagatg
gctgatgccttcaagtcagactattttaacatgccagtacatatggtccccactgagctg
gttgaaaaagaattttggagacttgtcagtaccattgaagaggatgtgacagtggaatat
ggagctgacattgcttcgaaggagtttggcagtggcttcccagttagaggtgggaagttt
aaagttagaccagaagaagaggaataccttgacagtggctggaatttaaacaacatgcct
gtgatggagcagtctgtgcttgctcacatcactgcagacatctgtgggatgaagttgccc
tggctgtatgtaggaatgtgcttttcctcattttgttggcatatagaagaccattggagc
tattccattaactatctgcattggggggagcctaaaacgtggtatggagccccagggtac
gcagctgagcagctggaggatgtaatgaagaaacttgctccagagctatttgagtcccag
ccagatctcttgcaccaacttgtcaccataatgaacccgaacactttgatggcccacggg
gtgcctgtgtacagaaccaaccagtgtgctggggagtttgtgatcacctttcccagagct
taccacagtggcttcaaccagggcttcaactttgctgaagctgtcaacttctgcaccgta
gactggctgcccctgggccggcagtgcgtggagcattaccgcctgctccaccgctactgc
gtcttctcccacgacgagatgatctgcaaaatggcttccaaagcagatgtgctggacgtt
gtggtggcatctacagtgcagaaagacatggctattatgattgaagaggagaagaggttg
cgtgagaaggttgataagctgggagtgactgactcggagagggtgacgtttgagctgttc
cctgatgacgagcggcagtgcctgaagtgtaaaaccacctgcttcatgtcagcagtttat
tgtccctgcaaacctgggctgctggtgtgcttgtaccacattgaggacctctgctcctgc
cccacctacaaatacaaactggggtaccgctacaccctggaggagctgtaccccatgatg
gacgcgctcaagatgcgcgccgagtcctacaacgagtgggcttccaacgtcagcgaggcc
ctggaggcaaagatcaacaacaaaaaaagtctcatcagttttaaggctttgatagaagaa
tcagaaatgaaaaagttcccagacaacgacctgctgcggcacctccggctggtgacgcag
gacgcagacaaatgtgcctcggtggcccagcagctgctgaatggcaagagacagaccagg
taccgctccggaggagggaagtgccagaaccagctgacagtgaacgagctgaggctgttt
gtcaggcagctctatgccctgccctgtgtgctcagccagacacccctgctgaaggatctc
cttgaccgtgtggaagctttccagcagcaaagccaaaagctcctttccgaggagacgccg
agcgccgcggagctgcaggagctgctggacgtcagctttgactttgacgtggagctgccg
cagctggcgcagctgcgcacgcggctggagcaggcgcgctggctgcaggacgcgcagctg
ggctgctccgagcgcggcgccctcaccctggaccacatgaggcgcctcatcgactcgggc
gtggggctcgcgccctgccccgccgtggagaaggccatggccaagctgcaggagctcctc
accgtgtccgagcactgggatgacaaggccaggaacctgataaaggccaggccccggcag
tccctgagcagcctggcagcagcagtgaaggagctggaggagatcccagcctacctccca
aacggagcagcgctgaaggatgctgtgcagaaggccaaggactggctgcaggaggtggag
gctctgcaggtcgggggccgcgtgcccgtgctggacacgctggcagagctcgtcacgagg
ggtcgctccatccccgtgcacctggactacctgcccaggctggaggccctggtggctgaa
gtgcaggcgtggaaggagtgtgcagcaaacaccttcctgtgtgagaactctccatattcc
cttctggaggtgttgtgtccctggtgtgacattgggatgctcagtctgaagaggaagcag
aagaagctgaaggaggcagtgccaagtggcaagaagaagagcactaagctggagacgctg
agtgacctggagcgggcgctctcggaaagcaaggacactgcatcggcgatggccacgctg
ggagaggcgcggctgcgggagatggaggcgctgcgtgcgctgcgagcggccaacgaggcc
aaggcgctggcgggcgaggaggacgccgagctcaaggtgtgtctgtgccagaaggagccg
gcgcctcccatgctgcagtgtgagctctgcaggggcttcttccacagcggctgcgtgccc
gcggccggggcgccggggccgcgcggtgtctggctgtgcccgctgtgccgccgctcgcag
aagccgccgctggagaaggtgctgccgctgctggcggccctgcagcgcatccgcgtgcgc
ctgcccgagggcgacgccctgcgctacgtgatcgagagaactgtgaactggcagcacaga
gcacaacaaatgttgtattcagggaatctcaaacgcatccaggacaaggttggctcagga
ttactgtacagcaggtggcaagcctcggcgggccagctgccggagacaaacaaggtgtca
cagacaattggagcaatgtcattctccatgcctcatgactgggataacagaagcatgtat
ttgcattctccattctctacaggacagcactgcatcccacttcatgtcattagcaccgag
ctggatgagctgatgatggaagcccagctgctgcaggtttccctgcctgagatccaggag
ctgtaccaggccctgttcacaaagcagagccctgccctgcagcctgagcagaggtcaccc
agcacagccacaagtgagaagaacgagtgttgccgagggaaaaaggatgggatgagttac
atggagagaaaactgaagcggcgtttcgagagagagaacttctgtggtgagaagagagcg
agagtaaaaaagatgagaacacccaaaaagaagaagctgagactgagtccctcaaaggat
cagtgcagtaacaaggcggagcgggagcggctgcaggagccgcagcgctgcagcgacagc
ccctcgctgccctccgactccttctccgagcaggaggactccgaggatgaggatgccatc
tgcccagctgtcaactgcctccagcccgagggggatgaggtcgactgggtccagtgtgat
ggcagctgcaaccagtggttccaccaggtgtgtgtgggcatctccccagagatggcagag
aaggaggattacatctgcgccagctgcgccggcaaggacgccccgtgccggaagtga

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