KEGG   Oenanthe melanoleuca (Eastern black-eared wheatear): 130263731
Entry
130263731         CDS       T09236                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
oma  Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130263731 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oma03041]
    130263731 (BCAS2)
   03400 DNA repair and recombination proteins [BR:oma03400]
    130263731 (BCAS2)
Spliceosome [BR:oma03041]
 Complex B
  Other components
   Prp19 complex
    130263731 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    130263731 (BCAS2)
DNA repair and recombination proteins [BR:oma03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    130263731 (BCAS2)
SSDB
Motif
Pfam: BCAS2 THOC7 EzrA CCDC113_CCDC96_CC INO80F SCRG1 Tup_N GAS DUF3450 Phlebovirus_NSM
Other DBs
NCBI-GeneID: 130263731
NCBI-ProteinID: XP_056367446
LinkDB
Position
26:complement(3735601..3738807)
AA seq 226 aa
MSGPGLVAGDVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAHDYSA
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNEHLVHMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGAKLRE
MESTWVSLVSKNYEIERTIVQLENEISQIKQQHGEANKENIQQDFQ
NT seq 681 nt   +upstreamnt  +downstreamnt
atgtcgggcccggggctggtggccggggacgtggtggtggatgcgctgccctacttcgac
cagggctacgaggcgccgggcgtgcgggaggcggccgcggcgctggtggaggaggagacg
cggcggtaccggccgaccaagaactacctcagctacctgcccgcgcacgactacagcgcc
ttcgagaccgagatcatgcggaacgagttcgagcgcctggcggcccggcagcccctggag
ctgctcagcatgaagaggtacgagctgcccgccccatcctccgggcagaagaacgacatc
acggcgtggcaggagtgtgtgaacaattccatggctcagctggagcaccaggctgtgcgc
attgagaacctggagctcatgtcccagcacggctgcaatgcctggaaggtgtacaacgag
cacctggttcatatgatagaacaagcccagaaagagcttcagaaattgagaaaaaatatt
caagacctgaactggcagaggaagaacatgcagctcacagctggggctaagctgcgagag
atggaatccacgtgggtctctcttgtcagtaaaaattatgagattgaacgaactattgtt
cagctggaaaatgaaatttcacaaatcaagcagcagcatggggaagcaaacaaggagaat
atccagcaagactttcaatga

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