KEGG   Oenanthe melanoleuca (Eastern black-eared wheatear): 130264293
Entry
130264293         CDS       T09236                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
oma  Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:oma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oma03036]
    130264293 (KDM4B)
Enzymes [BR:oma01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     130264293 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     130264293 (KDM4B)
Chromosome and associated proteins [BR:oma03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130264293 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Rad9_Rad53_bind DUF7141 Tudor_3 SLX1_C 53-BP1_Tudor
Other DBs
NCBI-GeneID: 130264293
NCBI-ProteinID: XP_056368332
LinkDB
Position
28:5353820..5425223
AA seq 1083 aa
MGSESPSPQNPGCKIMTFRPSLDEFRDFGRFIAYMESQGAHRAGLAKVIPPKEWRPRRTY
DDIDAMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVDEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRLLQPERYELWKQGKDSAVLDHMRPTALSSPELDAWNQ
SKAELKAKLLRRIGDEEEDSKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEE
LKRGPDVEEEERSKGMEGEGECKARPRPPKAKGERRRKQQPPFPAPFPAPPPSLPPQQPP
EAGPGPARPPGPAPGPAPAPGPAQGPLNVVPPAGAPAPEDDFRPRPIIPMLYVVPRSKKV
VFDKEHMSCQQAFEQFATQQGLGWRPAKEHDGAQAQQGQLATEAASAFSKMKMEIKKSRR
HPLGKPPTRSPLSVLKQETSSDEEMFPFSGEEDMSDPEALKSLLSFQWKNKALNFPAERK
FNAAAALSEPYCAVCTLFYPYNQSSQVEREAAGEPPSLVQLSRCGQRSKPLIPEMCFTSS
GENTEPLPSNSYIGEDGTSPLISCAKCCLQVHASCYGIRPELVNESWACSRCSAGAWAAE
CCLCNLRGGALQMTTDGRWVHVICAIAVPEARFLNVIERHPVDISAIPEQRWKLRCVYCR
KRMRRVSGACVQCSYEHCSTSFHVTCAHAAGVPMEPEDWPYVVSITCFKHKAANQNVLLH
REVALGQAVITKNRNGLYYRCRVIGSSTQTFYEVNFDDGSYSDNVYPESILSRDCVQLGP
PPEGELVQLQWTDGIVYKAKFIAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKS
RLSLSTGAPQEDAFSGDEVRAAKRARLGNARSAEEYGQSPDYLAFMESLLQTQYQPGTQS
NMF
NT seq 3252 nt   +upstreamnt  +downstreamnt
atggggtccgagagcccgagcccgcagaaccccggctgtaagatcatgaccttccggccc
tcgctcgacgagttccgcgacttcggccgcttcatcgcctacatggagtcccagggagcg
caccgcgccgggctggccaaggtgatcccccccaaggagtggaggccgcgccgcacgtac
gatgacatcgatgccatggtgatccccgcccccatccagcaggtggtcacgggccagtcg
gggctcttcacccagtacaacatccagaagaagcccatgacggtgggcgagtaccggcgg
ctggccaacagcgagaagtactgcaccccccggcaccaggactttgaggacctggagcgc
aagtactggaagaacttgacctttgtgtcgcccatctacggggccgacatcagcggctcg
ctgtacgacgcagatgtggatgagtggaacattggcaacctgaacacactcctggacatg
gtggagcacgagtgtggcatcatcatcgagggggtgaacactccctacctctactttggg
atgtggaaaacaacttttgcttggcacacagaggacatggatctctacagcatcaactac
ttgcattttggggagcccaaatcctggtatgccattcccccagagcatggcaagaggctg
gaacgcctggccaaagggtttttcccagggagctctcagggatgtgatgctttcctccgg
cacaagatgactctcatttctccctccatcctgaagaaatatgggatcccctttgacagg
atcacgcaggaggccggggagttcatgatcacctttccctacgggtaccacgccggcttc
aaccacggcttcaactgcgccgagtccaccaacttcgccacgctgcgctggatcgactac
ggcaagatggccacgcagtgcacgtgccgcaaggacatggtgaagatctccatggacgtg
tttgtgcggctgctgcagcccgagcgctacgagctctggaagcagggcaaggacagcgcc
gtgctcgaccacatgcggcccacggccctcagcagccccgagctggacgcctggaaccag
agcaaggccgagctcaaggccaagctgctgcgccggataggagatgaggaagaggacagc
aaacaccggtctcacagaaaaaggagtcagcccagaagacacaaaacagaggatcagaag
tctcttggggatgtcatggctattgaaactgccctggaggatgtgaaagtgaaagaggag
ctgaaaagggggccagatgtggaggaagaggagaggagcaaagggatggagggagaaggc
gagtgcaaggcgcggccgcggccgcccaaggccaagggcgagcgcaggaggaagcagcag
ccgccgttcccggccccgttcccggcgccgccgccctcgctgccgccccagcagccgccc
gaggccgggccgggcccagcgcggcccccggggcccgccccaggcccagccccggcccca
ggcccggcccagggccccctcaacgtggtgccccccgcgggggcgccggcccccgaggac
gacttcaggccgcggcccatcatccccatgctgtacgtggtgccccgcagcaagaaggtg
gtgttcgacaaggagcacatgtcctgccagcaggccttcgagcagttcgccacgcagcag
ggcctgggctggcgccccgccaaggagcacgatggcgcccaggcccagcagggccagctc
gccactgaggccgcttctgccttctccaagatgaagatggagatcaagaagagccggcgg
cacccgctggggaagccgcccacgcgctcgccgctgtccgtgctcaagcaggagacctcc
agtgatgaggaaatgtttccattttctggagaggaagatatgagtgatccagaggctttg
aaatctttactttccttccagtggaagaacaaagcacttaatttcccagctgaaaggaag
ttcaatgcagctgctgccctgagtgagccatactgtgctgtctgcaccctcttctacccc
tacaaccagtcctcacaggtggagagggaggctgcaggggagcctccctccctggtgcag
ctctccaggtgtgggcagaggagcaagcccctgatccctgagatgtgcttcacctccagc
ggggagaacacggagcccctgccctccaactcctacattggggaggatggcaccagcccc
ctcatctcctgtgccaagtgctgcctgcaggtccatgccagctgttacgggatccgcccg
gagctggtgaacgagagctgggcgtgctcgcggtgctcggccggcgcctgggcagcggag
tgctgcctgtgcaatctcaggggaggagctctccagatgaccactgatggccggtgggtg
cacgtgatctgtgccatcgctgtccccgaggcgcgcttcctcaacgtcatcgagcggcat
cctgtggacatcagcgccatccccgagcagaggtggaagctgaggtgtgtgtactgcagg
aagaggatgaggagggtctctggggcctgtgtgcagtgttcctacgagcactgctccacc
tccttccacgtcacgtgcgcgcacgcggccggggtgcccatggagcccgaggactggccc
tacgtcgtctccatcacctgcttcaagcacaaggcagcaaaccagaacgtgctgctgcac
agggaggtggccctggggcaggctgtgatcaccaagaacaggaacgggctctactatcgc
tgccgcgtcatcggcagcagcacccagaccttctacgaggtcaacttcgacgacggctcc
tacagcgacaacgtctaccccgagagcatccttagcagggactgtgtccagctggggccc
cctcccgagggggagctggtgcagctgcagtggacggacgggatcgtctacaaggccaag
ttcattgcagcccagatcagccagatctaccaggtggagtttgaagatggctctcagcta
atggtgaagcgtggggatatttataccttggaggaagagcttcccaagagagtcaagtct
cgcctgtccctcagcactggggcccctcaggaagatgcattttcaggagatgaagtgaga
gcagccaagcgtgcccggctggggaatgccagaagtgcagaggaatatggacaaagccca
gactacctggccttcatggagagcctgctgcagacacagtaccagcctgggactcagagc
aacatgttttaa

DBGET integrated database retrieval system