Oenanthe melanoleuca (Eastern black-eared wheatear): 130264605
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Entry
130264605 CDS
T09236
Symbol
GDF1
Name
(RefSeq) embryonic growth/differentiation factor 1
KO
K05495
growth differentiation factor 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130264605 (GDF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130264605 (GDF1)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oma04052
]
130264605 (GDF1)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
130264605 (GDF1)
Cytokines and neuropeptides [BR:
oma04052
]
Cytokines
Transforming growth factors (RSTK binding)
130264605 (GDF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
130264605
NCBI-ProteinID:
XP_056368892
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Position
28:4378222..4382217
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AA seq
460 aa
AA seq
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MSWRLMALREKLDAVIEFKKEDFWGGRAGLGSVPGILGAALDFPSPSLSPRTALEMREAL
KGLKGCGGSLERPHPPPSRGNPAALIEQQAHQRLRSHRAPLFVWAGGAGMWLLRSLAWAL
LSPVLATELCRQESSLLQSLGLSAKPSPKNPAPVPPVLWRMFQRREALPRPHKDQDPCRV
EELSVPGDIVRVFADQGRFLPEGQPQGLCLRKLLFFNLSVLEEGERLTMAQLELQFQHNS
YPAPSPGQLLELRLYRVSPRGLPQPRPGRRPLLERSLVQLHKSLLFDLSAALKMPGRDLA
LLLEISASGRSGTLRSLCASSSDSLVATSLLVVTLGRQCRAGRSRRNAPSPSVTPSPLCK
PRRLYISFSDVGWENWIIAPQGYLANYCGGECPFPLAAELNSTNHAVLQTMVHSLDPQGT
PQPCCVPVRLSPISILYYDNSDNVVLRHYEDMVVDECGCR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagctggaggttgatggctttaagagaaaagttggacgccgtgattgagtttaaaaaa
gaagatttttggggaggaagagccggcttagggtccgtccccgggattttgggagcagcg
ctggatttcccatcgccatccctgagcccacggactgcgctggagatgcgggaagccctg
aaagggttaaaggggtgcggggggagcctggagcgaccccaccctccgcccagccgcggg
aatcccgcggcgctaattgagcagcaagcccatcaaaggctccgatcgcaccgggctccg
ctctttgtctgggccggcggagcggggatgtggctcctccgcagcctcgcctgggctctg
ctcagccccgtcctggccaccgagctgtgccggcaggagagttccctgctgcagtcgctg
gggctgagcgccaagcccagccccaaaaacccggcgcccgtgccgcccgtgctctggagg
atgttccagcggagggaggcgctgccccggccccacaaggaccaggatccctgcagggtg
gaggagctcagtgtccccggggacatcgtgcgcgtcttcgccgaccaaggccgtttcctc
cccgaggggcagccccaggggctgtgtctgcggaaactcctcttcttcaacctctcggtg
ctggaggagggcgagcgcttgaccatggcccagctggagctccagttccagcacaactcg
taccccgccccgagcccggggcagctcctggagctgcggctgtaccgggtgtccccccgg
gggctgccccagccccggccgggccggaggccgctgctggagcggtcacttgtccagctg
cacaaatcgctgctgttcgacctgagcgcggcgctgaagatgccgggcagggatttggct
ttgctgctggagatctccgcgagcggccggagcgggaccctgcggagcctctgcgccagc
agcagcgactccttggtggccacctcgctgctggtggtgaccctgggccggcagtgccgc
gctggccgcagcaggaggaacgctccgagcccctcggtgacccccagccccctgtgcaaa
ccccgccggctttacatcagcttcagcgacgtgggctgggagaactggatcatcgccccg
cagggctacctggccaactactgcggcggcgagtgtcccttcccgctggcggccgagctg
aacagcaccaaccacgcggtgctgcagaccatggtgcactcgctggacccgcaggggacc
ccgcagccctgctgcgtgcccgtgcgcctctcgcccatctccatcctctactacgacaac
agcgacaacgtggtgctgcgccactacgaggacatggtggtggacgagtgtggctgcagg
tag
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