Oenanthe melanoleuca (Eastern black-eared wheatear): 130264607
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Entry
130264607 CDS
T09236
Symbol
COMP
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04145
Phagosome
oma04510
Focal adhesion
oma04512
ECM-receptor interaction
oma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130264607 (COMP)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130264607 (COMP)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130264607 (COMP)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130264607 (COMP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130264607 (COMP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oma04147
]
130264607 (COMP)
00536 Glycosaminoglycan binding proteins [BR:
oma00536
]
130264607 (COMP)
Membrane trafficking [BR:
oma04131
]
Endocytosis
Phagocytosis
Opsonins
130264607 (COMP)
Exosome [BR:
oma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130264607 (COMP)
Exosomal proteins of colorectal cancer cells
130264607 (COMP)
Exosomal proteins of bladder cancer cells
130264607 (COMP)
Glycosaminoglycan binding proteins [BR:
oma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130264607 (COMP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
130264607
NCBI-ProteinID:
XP_056368893
LinkDB
All DBs
Position
28:4431697..4455566
Genome browser
AA seq
788 aa
AA seq
DB search
MAPALLLLLLCCPLCWSQQRRIDPSRPLQSAAPRKEPAWSRNPGNSLAAGGEVGPEMLQE
MRETNRVLLEVRDLLKQQIKEITFLKNTVMECDACGMRPEVTGPVITMTQFNRCVPNPCF
PGVACTESGGGFRCGACPAGYSGNGTHCSDINECNANPCFPKVQCINTNPGFRCDPCPPG
FTGQLLEGVGLAFARANKQVCTDINECETGAARNCVPNSICINTRGSYKCGPCKPGFVGD
QSSGCRSQAAPGARRCPNGEISPCHEKAECIVERDGSLSCQCLVGWAGNGYVCGKDTDID
GVPDEKQRCSDKKCRKDNCVTVPNSGQEDADRDGIGDACDDDADGDGIPNAEDNCVYTRN
ADQRNADRDNFGDACDNCRQVKNNDQKDIDGDGRGDECDDDMDGDGIKNSVDNCRRVPNP
DQRDGDGDGVGDACDSCPSLSNPDQKDTDHDLVGDVCDTNQDSDGDGHQDSRDNCPSVPN
SSQVDTDGDGLGDECDEDDDDDGIPDFRPPGPDNCRLVPNPGQEDSDGDGVGNLCEDDFD
RDMVIDRIDVCPENAQVTLTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPG
LAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRA
VAEPGIQLKAVKSKTGPGEYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHR
PQVGYIRARFYEGPEVVADTGVVLDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDY
ETFRVQQD
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccccggcgctgctgctgctgctgctgtgctgtcccctgtgctggagccagcagaga
cgcatcgatcccagccggcccctccaaagcgctgccccccgcaaagagcccgcctggagc
aggaatcccgggaattccctggctgcaggaggagaagtcgggcctgaaatgctgcaggaa
atgagagaaaccaaccgggtgctgctggaagttcgggatttgttgaagcagcagatcaag
gagatcacgttcctgaagaacacggtgatggagtgcgacgcctgcgggatgcggccggag
gtgacgggtcctgtcatcaccatgacccagttcaaccgctgcgtgcccaacccctgcttc
ccgggcgtggcctgcaccgagagcggcggcggcttccgctgcggggcgtgtcctgcgggc
tacagcggcaacggcacccactgcagcgacatcaacgagtgcaatgccaacccctgcttc
ccaaaagtgcagtgcatcaacaccaaccccggcttccgctgcgacccctgcccgcccggc
ttcaccgggcagctgctggagggcgtggggctggcttttgccagggccaacaaacaggtg
tgcacagacatcaacgagtgtgagactggagctgccaggaactgtgtccccaactccatc
tgcatcaacacccggggatcctacaagtgcgggccctgcaagccgggcttcgtgggcgat
cagagcagcggctgccgcagccaggcggcgccgggggcgcggcgctgccccaacggcgag
atcagcccgtgccacgagaaggcggagtgcatcgtggagagggacggctccctgtcctgc
cagtgcctcgtgggctgggctgggaacggctacgtgtgcgggaaggacacggacatcgac
ggggtccccgacgagaagcagcgctgctccgacaagaaatgccgcaaggataactgcgtg
actgtccccaactccggccaggaggacgccgacagggacggcatcggggacgcctgcgac
gatgatgccgatggggacgggatcccaaacgctgaggacaactgtgtgtacaccaggaac
gcggaccagcgcaacgccgacagggacaacttcggggacgcgtgtgacaactgccggcag
gtgaagaacaacgaccagaaggacatcgacggcgacggccggggcgacgagtgcgacgac
gacatggacggggacgggatcaaaaactctgtggacaactgcaggagagttcccaaccct
gaccagagggacggggatggggacggcgtgggggacgcctgtgacagctgccccagcctc
agcaaccctgaccagaaagacactgaccacgatctggtgggagatgtctgtgacaccaac
caggacagcgacggtgacggccaccaggactctcgggacaattgtccctcagtgcccaac
agctcccaggtggacacggacggggacgggctgggggacgagtgcgacgaggacgacgat
gacgacgggatccccgacttccgtccgcccgggcccgacaactgccgcctggtgcccaac
cccggccaggaggactcggatggggacggcgtggggaacctgtgtgaggacgacttcgac
cgggacatggtgatcgacaggatcgacgtgtgccccgagaacgcccaggtcaccctgacc
gacttcagggccttccagaccgtggtgctggaccccgagggggacgcccagatcgacccc
aactggatcgtgctcaaccagggcatggagattgtccagaccatgaacagcgaccctggc
ctggctgtagggtacacggccttcaatggagtggatttcgagggcaccttccacgtcaac
acggccactgacgacgactacgccggtttcatcttcggctaccaggacagctccagcttc
tacgtggtgatgtggaagcagatggagcaaacctactggcaggccaaccccttccgggcc
gtggcagagccgggcatccagctgaaggcagtgaaatccaaaacggggcctggggagtac
ctgaggaactccctgtggcacacgggggacaccacggaccaggtgaagctgctctggaag
gaccccaggaactcgggctggaaggacaaaacctcctatcgctggttcctgcagcaccgg
ccgcaggtcggctacatccgggctcgtttctatgaaggccccgaggtggtggcagacacg
ggagttgtcctggacaccaccatgaggggggggcgcctcggggttttctgcttctcccag
gagaacatcatctggtccaacctgcgctaccgctgcaacgacaccatccccgaggactac
gagacgttccgggtgcagcaggactga
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