Oenanthe melanoleuca (Eastern black-eared wheatear): 130264648
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Entry
130264648 CDS
T09236
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oma03021
]
130264648 (CHD1)
03036 Chromosome and associated proteins [BR:
oma03036
]
130264648 (CHD1)
Transcription machinery [BR:
oma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
130264648 (CHD1)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
130264648 (CHD1)
SLIK complex
130264648 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
DUF7855_C
Motif
Other DBs
NCBI-GeneID:
130264648
NCBI-ProteinID:
XP_056368970
LinkDB
All DBs
Position
Z:917515..972287
Genome browser
AA seq
1810 aa
AA seq
DB search
MNGHSDEESVRNSSGESSRSDDDSGSASASGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSREKKQIQSKPPKVDGSEYWKSSPSILAVQRSAVLKKQQQQQKAASSDSVSE
EDSSSSEDSADDSSSETKKKKHKDEDWQMSGSGSVSGTGSDSESEEDREKSSCEESESDY
EPKNKVKSRKPPTRIKPKSGKKSAGPKKRQLDSSEDDDEEEDDDDYDKRGSRRQATVNIS
YKEAEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRVGRKGATGAATTIYAVEADG
DPNAGFEKSKEPAEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKR
WLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSEC
SWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGQESLEL
RDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLST
LTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKS
FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL
QKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQ
HLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGE
LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFN
KEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKV
ANFSNMDEDDIELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQVS
FNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKF
GGPLERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSAGQERAGGRLGKVKGPT
FRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNL
LIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKE
AQRLAGAGNSKRRKTRTKKNKVLKAAKLKEEIKSDSSPQPSEKSDEDDDENNKDEIVSMK
HPHKKFKAEKENEEKPEPDTGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKEKDIK
EKRENKVKESTQKEKEVKEEKLNEIKSENKEKTKRIPLLDTPVHITASSEPVPISEESEE
LDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNP
EQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPD
VERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKDHR
DWDHYKQESRYYSDSKHRKLDDYRSRDHRSSLEGSLKDSRVHSDHRSHSDHRIHPDHRSS
SEYSHHKSPRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKST
PEHTWSSRKT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagtgtaagaaacagtagtggagagtcaagccgatca
gatgacgattctgggtcagcatcagcttctggatctggttcaagctctggaagcagcagt
gatggaagcagcagccagtcaggcagcagtgactctgactctggttcagagtcaggctct
caatcagaatcagagtctgacacatccagagagaagaaacaaattcagtctaaaccaccg
aaagttgacggatctgagtattggaagtctagtccaagtatacttgctgtgcaaagatca
gcagtgctcaagaagcagcaacaacaacaaaaggcagcctcatcagacagtgtttcagaa
gaggactcctcaagtagtgaagattcagcagatgactcatctagtgaaaccaagaagaaa
aaacataaagatgaagactggcaaatgtcaggatcagggtcagtatcaggaactggttca
gattctgaatcggaggaagacagggagaaaagcagctgtgaagagagtgaatcggactat
gagccaaaaaacaaggtcaaaagccggaagcctccaaccagaattaagccaaaaagtggg
aaaaagagtgcaggaccaaaaaagaggcaacttgattcatcagaggatgatgatgaggag
gaggatgatgatgattatgataagaggggatctcgtcgccaggcaactgtcaacattagt
tacaaagaagctgaagaaaccaagacggattctgatgatttgctagaagtttgtggagaa
gatgttccacaacctgaagaagatgaatttgaaacaatagagaaatttatggatagtcga
gttggccgtaaaggagccacaggtgctgcaactacaatatatgcagttgaggcagatggt
gacccaaatgctgggtttgaaaaatcaaaggagccagcagaaatacagtatcttattaaa
tggaaaggttggtcacacatccataacacttgggaaactgaggaaacactgaagcaacaa
aatgttaaaggaatgaagaaactggacaattacaagaaaaaggatcaggagacaaagcga
tggctgaaaaatgcttccccagaagatgtggaatattacaactgccagcaggagcttaca
gatgatctacataaacaataccagatagtggaaagaataattgctcattcaaatcagaaa
tcagctgctggttatccagactactactgtaagtggcagggtctgccttattctgaatgt
agctgggaagatggagctctcattgccaaaaagtttcaggcacgcattgatgagtacttc
agcagaaatcaatccaagaccactccctttaaagactgcaaggttctaaaacaaaggcca
cggtttgttgcactaaagaagcaaccatcttacattggaggacaagaaagtttagagtta
agagattatcagttaaatgggttgaattggcttgctcactcatggtgcaaagggaatagc
tgtattctcgcagatgaaatgggtctgggtaaaacaatacaaactatttcttttctaaat
tatctgtttcacgagcaccaactgtatgggcctttcttgttggttgtgccgctttctacc
ttgacatcttggcaaagagaaattcaaacctgggctcctcagatgaatgctgtagtttac
ttaggagacataactagtagaaatatgataagaactcatgaatggatgcatccacagacc
aagcgattgaaatttaacatactcttaacaacatatgaaattttgctaaaggataagtca
ttccttggtggtctcaattgggcgttcataggagttgacgaagctcatcgtttgaaaaat
gacgactctcttctgtacaaaacattaatagactttaagtctaaccatcgtcttcttatt
actggaacccctctgcaaaactctctcaaagagctttggtctttactgcacttcatcatg
ccagaaaagttctcctcatgggaagattttgaagaggagcatggcaaagggagagagtat
ggttatgcaagtcttcacaaagaacttgaaccatttctgctgagaagagttaaaaaagat
gtagaaaagtctttacctgctaaagttgagcaaattctgaggatggaaatgagcgcgttg
cagaagcaatactacaaatggattttaaccaggaattataaagcccttagcaaaggttca
aaaggcagtacctcaggctttttgaacatcatgatggaactcaagaagtgttgcaaccat
tgctacctcattaaaccaccagatgataatgaattctataataaacaggaggccttacag
catttaattcgtagcagtgggaaactaatccttcttgacaagctactgattcgtctgcga
gaacgtggcaacagagtcctgattttctcacagatggtaaggatgctggacatcctggca
gaatatctgaaatatcgtcaattcccatttcagagacttgatggatcaataaaaggggaa
ttgaggaaacaagcactggatcattttaatgcagaaggatcagaggacttctgcttttta
ctgtctaccagagctggaggattaggtatcaacttggcatctgctgatactgtggttata
tttgattctgactggaatccacagaatgatcttcaagcacaggctagagcacatagaatt
ggacagaagaaacaggttaatatttatcgactagtcacaaaaggatcagtagaagaagat
attcttgaacgagccaagaaaaagatggtgttagatcatttagtaattcagagaatggac
actacagggaaaactgtgttacatacaggctctactccttcaagctcaacaccctttaat
aaggaggagttgtctgcaattttgaagtttggtgctgaggaactttttaaagaaccggaa
ggggaagaacaggagcctcaagaaatggatatagatgaaatactgaagagggctgaaact
cgggaaaatgagccaggtccattaactgtaggggatgagttgctttcgcagttcaaggtg
gccaacttctccaatatggatgaagatgatattgagttggaaccagaaagaaattcaaga
aattgggaagaaatcattccagaggtccagaggcgaagaatagaagaggaggaaagacaa
aaagaacttgaagaaatatacatgcttccaaggatgagaaactgtgcaaaacaggttagc
ttcaatggcagtgaagggaggcgcagtaggagtagaagatactctggatctgatagtgac
tccatctcagaaagaaaaaggccaaaaaaacgtggaagaccacgaactattcctcgagaa
aatattaaaggatttagtgatgcagagataaggcggtttatcaagagttacaagaaattt
ggtggccctctggagaggttagatgctgtagctagagatgctgagctggttgataaatca
gagacagatctcagacgtttgggagagcttgtacataatgggtgcattaaagccttaaaa
gacaattcagctggacaagaaagagcaggaggtagacttgggaaggttaaaggcccaaca
ttccgaatctcaggagtgcaagtaaatgcaaagttagtcatctctcatgaagaagagttg
gcaccattgcacaaatccattccttcagatccagaagaaagaaaaagatatgttatccca
tgccacactaaggctgctcattttgatatagattggggtaaggaagatgattccaatttg
ttaataggcatctatgaatatggttatggcagctgggaaatgataaaaatggatcctgat
ctcagtttgacacagaagattttgccggatgatccagataagaaaccccaggcaaagcag
ttacagacccgtgcagactacctcattaaattactgaataaagaccttgcgaggaaggaa
gcacaaaggcttgctggagctggcaattcaaagaggaggaaaacaagaactaagaagaat
aaggtgctaaaggctgcaaaattaaaagaagaaataaaaagtgattcttcaccacagccc
tcagaaaaatcagatgaagatgatgatgagaataacaaggatgagattgtttcaatgaaa
catccgcataaaaaatttaaagcagagaaagaaaatgaagaaaagcctgagccagatact
ggtataaagaaggaagctgaagaaaaaagagagacaaaagaaaaggaaaataagagggat
ttgaaaagggagaaaaaagaaaaagaggataagaaagaattaaaagaaaaggatattaaa
gaaaagagagaaaacaaagtaaaagaatccacacagaaagaaaaagaagtaaaggaagag
aagttaaatgaaataaaatcagaaaataaggaaaaaactaaaagaattccattgctggat
actccagttcatattactgcatctagtgaaccagttcctatatcagaagaatctgaagaa
ctagatcagaaaacttttagtgtgtgcaaggaaagaatgagacctgtcaaggcagcattg
aaacagctggatcgaccagagaagggcctttctgaaagagaacagctggaacatactaga
cagtgtcttatcaaaattggggatcatattactgaatgtctaaaggagtacacaaatcct
gaacaaattaaacagtggagaaaaaatttgtggatttttgtctctaagtttacagaattt
gatgccagaaagctgcacaaattgtataaacatgcaatcaaaaaacgtcaagaatctcag
caacacaacgatcagaatattagcagcaatgtgaatacacatgtaattagaaatccagat
gtggaaagactgaaggagaatacaaaccatgatgacagtagcagggatagctactcctct
gatagacatctgtcacaataccatgatcatcataaagacaggcatcagggagatgcttac
aagaaaagtgactccaggaaaaggccctattcagccttcagcaatggaaaagatcacagg
gactgggatcactacaaacaagagagcagatactacagtgatagtaaacacagaaagtta
gatgactacaggagcagagaccacaggtcaagcctggaagggagtctgaaagacagccgg
gttcattcggatcaccgttcccactcagaccacaggatacatccggatcaccgttcctct
tccgagtacagccaccataaatctcccagagattacaggtaccactcagactggcaaatg
gaccacagagcttcaggtagtggcccaaggtcaccactggatcagaggtctccttatgga
tcaagatctccccttggtcacagatctccatttgaacattcatcagatcacaaaagtaca
cctgaacatacatggagtagccggaaaacataa
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integrated database retrieval system
