Oenanthe melanoleuca (Eastern black-eared wheatear): 130264683
Help
Entry
130264683 CDS
T09236
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130264683 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oma03021
]
130264683 (SMARCA2)
03036 Chromosome and associated proteins [BR:
oma03036
]
130264683 (SMARCA2)
Transcription machinery [BR:
oma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130264683 (SMARCA2)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
130264683 (SMARCA2)
Chromatin remodeling factors
BAF complex
130264683 (SMARCA2)
PBAF complex
130264683 (SMARCA2)
GBAF(ncBAF) complex
130264683 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
130264683
NCBI-ProteinID:
XP_056369023
LinkDB
All DBs
Position
Z:complement(50341193..50456154)
Genome browser
AA seq
1569 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIAGDPQVMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGAAPGP
GAAPGMPGHTTAVTPKTWTEGQAPDMNVSNAQQKLPAPAPSGRPSPAPTAAQPAATIPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSKLETDEKIVLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY
RSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEE
EDEEEESESESKSVKVKIKLNKKDEKGREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQ
SEASGSDDE
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctggggcctagcccaggaccagggccatctcctggctccgtt
cacagcatgatggggccgagtcctggtccacccagtgtcccacatccaatgccgaccatg
gggcctacagattatccacaagaaggcatgcatcaaatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcattgtggttccatgaagagtatgcgacctcct
catcctggaatgggcccacctcagagtccaatggaccaacatagccaaggttatatgtct
ccacatccgtctccactaggagcaccagagcatgtgtccagtccaatgtctggaggaggt
ccaacaccacctcagatgactcccagtcagccaggacccattatagcaggagacccgcaa
gttatgaatcagcctaacagagggccttcccctttcagccctgcacagctgcatcagctg
cgggctcagattctagcctacaaaatgctggctaggggtcagcccttaccagaaaacctc
cagcttgctgtccagggcaagagaaccctgcctggcattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattggattacatgcaatgagtggtgctgcacctggacca
ggggctgcaccagggatgcctggacatacaactgccgttacccctaaaacttggactgaa
ggccaagccccagatatgaatgtctccaatgcacaacaaaagcttccagcgccagctcct
agtgggaggccttctcctgctcccactgctgcccagcctgctgccaccatacctgggccc
tctgtaccacagcccccacctggacaaccttcacctattgtccagctgcagcaaaagcag
aaccgcatcagccctatccagaagccacaaggattggatcctgttgaaatactccaagaa
cgtgaatatagacttcaggctcgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccgcctgatctgcgaaccaaagctacagtggaattgaaagcacttaggtta
ctgaacttccaacgccagttaaggcaagaggtagtagcctgcatgcgtcgtgacacaaca
ctggagacagcactgaactccaaagcctacaaacgaagcaagcgccagactctgagagag
gctcgtatgacagaaaagcttgaaaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcaccaggaatacctgaacagcatattgcaacatgctaaagattttaaagagtac
caccggtcagttgctgggaaaattcagaaactttctaaagctgtggcaacttggcatgcc
aacactgaacgtgaacagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgatcaaaagaaagacagacgc
ctggcctacctgttgcagcagacagatgagtatgtggctaacttgactaacctggtatgg
gagcataaacaggcacaagcagccaaagagaagaagaagcgaaggagaagaaagaagaaa
gctgaagagaatgcagaaggaatggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaagcaagtcagttggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagacagtgaagatgaaagtggttctgaatatgaagag
gaggatgaagaagaagaatcaagcaaattagaaacagatgagaagatagtcctggatcct
aacagtgaggaagtttctgagaaagatgcgaagcaaatcattgagacagccaaacaagat
gtggatgatgaatatagcatgcaatatagcgccagagggtctcagtcctactacactgtg
gctcatgcaatcaccgaaagggtggaaaagcagtcttcccttcttattaatggcacatta
aaacattatcagctccagggactggaatggatggtttctctttataataacaatctgaat
ggaattttagctgatgaaatgggactagggaagacaatacagactattgctctcatcact
tacctgatggagcacaagagactcaatggcccctatctcatcattgttcccttgtcgact
ttatccaattggacatacgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttatgagtacataataaaggacaaacacatccttgctaagattcgg
tggaagtacatgatagtagatgagggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaacactcactacgtggcccctcggcgaatcctgctgactgggactcctttg
cagaacaaattgcctgaactctgggctcttctcaatttccttcttccaaccattttcaag
agctgcagcacctttgaacagtggttcaatgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagttcttcggccc
ttcttgctgagaagactgaagaaggaggttgagtctcaacttccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
ggaatccttctcacagatggttctgaaaaggacaagaagggaaaaggcggagcaaaaact
cttatgaacactatcatgcagttgagaaagatatgcaatcacccatacatgtttcaacac
attgaggagtcctttgctgaacatctgggctactcaaatggtgtcattaacggagctgaa
ctttaccgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagcc
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgactattatggaagac
tactttgcatttcgaaatttcctttatctgcgtctcgatggcacaacaaaatcagaggat
cgagctgctcttttgaagaagttcaatgagcccggatctcaatactttatcttcttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacaccgttataatcttt
gatagtgactggaatcctcatcaggacttgcaggcccaggatagagctcaccgaattggt
cagcagaacgaagttagagtcctgcgactgtgcaccgtgaacagtgtggaggagaagatc
cttgctgcggcaaagtataagctgaatgtagaccagaaagttatccaggcaggaatgttc
gatcagaagtcttcaagccacgaaaggagggcattcctacaagctatattggagcatgaa
gaggaaaatgaggaggaagatgaagttcctgatgatgagactctgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgcatggacatggatcgtcgcagggaagat
gccagaaaccctaaacgtaaacctcgcttaatggaggaggatgaattgccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaggaagaagaagagaaaatattt
ggaagaggatcccgtcagcgcagggatgtggactacagtgatgctctcacagagaaacag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aagcgaaagagaagaagaaacgtggataaggattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagctgtcgcccaatccacccaaactgaca
aaacaaatgaacgcgatcattgatactgtgataaactacaaggatagcagttcaggacgg
cagctaagtgaagtcttcattcagcttccatctaggaaagaactaccagagtattatgaa
ttaattaggaagccagtggacttcaaaaaaataaaggaaagaattcgcaaccataaatat
cggagtcttggggatttagaaaaagatgtcatgctgctatgtcacaatgcacagacattc
aacttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagt
gcacgacagaagatagccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagaa
gaagatgaagaagaagaatctgaatcagaatcaaaatcagtgaaagtcaaaatcaagtta
aataagaaggatgaaaaaggtcgggaaaaaggaaaaggcaagaagaggcaaagcagagca
aaagccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccag
tcggaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
