Oenanthe melanoleuca (Eastern black-eared wheatear): 130265269
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Entry
130265269 CDS
T09236
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oma04121
]
130265269 (TOPORS)
03036 Chromosome and associated proteins [BR:
oma03036
]
130265269 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oma03037
]
130265269 (TOPORS)
Enzymes [BR:
oma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130265269 (TOPORS)
Ubiquitin system [BR:
oma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130265269 (TOPORS)
UBL E3 ligases
130265269 (TOPORS)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
130265269 (TOPORS)
Cilium and associated proteins [BR:
oma03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130265269 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
130265269
NCBI-ProteinID:
XP_056370207
LinkDB
All DBs
Position
Z:complement(25925371..25930733)
Genome browser
AA seq
1044 aa
AA seq
DB search
MADSSRRLAEGSRRRRLPGEERRETPGAGRCRTRHRLKAAAGLARAGSEGPAANMTSDKE
FAENSNFSPKASTSKLPTDASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEWSKNKAE
CPLCKQPFFSIFHTIRAEDDFKEYVLSPLETSSFASPDGRRFRYRTTLTRERRTRSSPSR
GMLSPPDNGMLFEGLSSEPARHRHREIQQMIRRLASRRRASAEGRSLRQIQEEDMINFRR
ALYRTGVRIRSIQDGGRYREISADFFRRNPACLHRLVPWLKRELTVLFGAHGSLINIVQH
IIMSNVTRYDLESQAFADDIKPFLLNRTEHFLHEFISFARCPFNLEAYDQHANYDCPAPS
YEEGSHSDSSIITISPDVAFPQGPDNSLSVPGLAQAPWDDETPGPSYSISEEVRATIASP
LESSESSDEDSATGSRRAKLQTELQANADSNDSGSSSDNCVIVGYVKPLAERTPEVVELS
SDSEDSIKEEKREDVKKQRPVQCHSWSDSEPSRSFSPHSPTYREDVGICRSCLSPAIEKT
ESKEDEKNKCKRKDLPPQDLSWSPSPGSDTVCSPWNHRFSKKGKSRSPQSCSRDSRGSHG
HRSRRDHHSKSQLKRRRSRSRDSSKHRSKRSSRRSRAHDSRASLKSQRGSLSGESTPSRE
VSRSRSRSKGHGKRRSRSRDSDRYYVRDSYQSRHQWGSAFCSRKVFGDSYESSSRRRTRS
NTLYSRQSASPEYRIRSFIERTDLHSQRGLHERHYYCYERCRSRSRSSNKSRTPSGGTDR
TKSEKPGGKRKYKTRHLENAFMESTSLERENDSKKTSSKFSDCCKNEDSLSDNRASSETK
RKKRKKKMRSPSVEIVYEGKATDTTRHLKKKKKKHKKKHRKHHTSNSVHSSPVVITIDSD
SSKEPESTEWDSSITWAGATQINERENESPSAFLSRTACEETGGADKCGIPATRENLDGG
VRNADVKLQGTVDQSVTTANASSNTSQAETVTSYVQEAPASPSSQLPSPRTSFLECPERE
PLILRLPKRFVSRSSWFDFPEEKM
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcgtcccggcgcctggcggagggctcccgccgccgccgcctgccaggggag
gagcggcgggagacgcccggcgccgggcgctgccggacgcgccacaggctgaaggcggcc
gcgggcctggcccgcgcgggaagcgaaggcccggcggcgaacatgacttcagataaggag
tttgcagaaaatagcaatttttcgccaaaagctagcaccagtaagctgccgacagatgca
tctcccgactccaaatgccccatctgcctggacaggtttgacaacgttgcatatctagat
cgctgcttgcataggttctgcttccgctgtgtccaggaatggtcaaaaaacaaagcagag
tgcccgctctgcaagcagccctttttttccattttccatacgattcgtgctgaagatgac
tttaaggagtacgtcctcagccctttagaaacgagctcttttgccagccctgacggccgg
agatttcgttaccgcaccaccttgaccagggagcggcgcacgcgcagctccccttcccga
gggatgctgtcccctccagataacgggatgctgtttgaaggcttgtcgagcgagccagcg
cgacacaggcacagagagattcagcagatgatcaggaggctggcctcgaggagaagggcg
agcgcagagggcagatctctgcggcagatccaggaggaggacatgatcaacttccgcagg
gctctgtaccgcactggcgtgcgcatccgcagcattcaggacggcggccggtaccgagag
atttcggcagacttcttccgccgcaaccctgcctgccttcaccgcctggtcccctggctg
aagcgagagcttacagtcctgtttggtgcccacggatctttgatcaatattgtgcagcac
atcatcatgagtaacgtcactaggtacgatctggaaagtcaggcctttgctgatgacatc
aagccgtttttgctgaatcgcacagagcacttcctgcacgaattcatcagttttgctcgt
tgtccttttaacttagaagcgtatgatcagcatgccaattacgactgtcctgcaccatca
tacgaggaaggaagccactcagactcctcgattattacaatatctccagacgtggcgttc
ccacaagggccagataatagcttgtctgtgcctgggcttgctcaggcgccctgggacgac
gaaactcctgggccttcctattccatttcagaagaggttcgtgcaaccatagcttctcct
ctggagtcatcagaaagttctgatgaggactctgctacagggagtcgaagagccaaactg
cagactgagttacaggctaatgctgactcaaacgacagtggctcttcctcagacaactgt
gtcattgttggctatgtgaagccgttagctgagaggacaccagaagtggttgagctgtcc
tctgactccgaggactccatcaaggaagagaaaagagaagatgtcaagaagcagcgaccg
gtccagtgtcacagctggagtgacagtgaaccaagcaggagcttctcaccacattctcca
acatatagggaggatgtaggaatttgtagaagctgtttatctcctgcaatcgagaagacg
gaatcaaaagaggatgagaagaacaaatgtaaaagaaaagatctgcctccgcaggacttg
agttggagcccatctccaggaagtgacacggtatgctctccttggaatcacagattttct
aaaaagggaaagtccaggagcccacagtcctgttcacgggacagtcgaggcagtcatggc
catcggtctagaagggatcaccatagcaaaagccagctgaaaaggagacgatcaagaagc
agagatagtagcaaacatagaagcaaaagaagcagcagaagatcaagggctcatgacagc
agagcctctctgaaaagccagaggggctctctgagtggtgagagcactccatccagagaa
gtgagtagatcacgttcacgtagcaaaggccatggtaaaaggagatcaagaagtagagat
agcgatcgctactatgtaagagacagttatcaaagcagacaccagtggggttctgctttc
tgcagtcgaaaggtgtttggagacagctatgaatcttccagcagaaggaggacacggtct
aacactctttactcaaggcaatctgctagtccagagtacaggatacgatcatttattgag
aggacagatctgcatagccagaggggactccatgagagacactattactgttatgagaga
tgcaggtcaaggagtcggtccagcaacaaatcaaggactccttctggaggaactgacaga
acgaaaagtgaaaagcctggtggaaaaaggaagtacaaaactcgccacctcgagaatgca
ttcatggagagcacaagtctagaaagagaaaatgactccaagaaaacttcctcaaaattt
agtgactgctgtaaaaatgaagatagcctgtcagacaatcgtgcaagcagtgagacaaag
cgtaagaaaaggaagaagaaaatgaggagtccaagtgtggagatagtctatgaaggaaaa
gcaacagacacgacaagacatcttaaaaagaaaaagaaaaagcataagaagaaacaccgg
aaacatcacacgagtaactctgtacattcttctccagtggtgattacgattgatagtgat
agtagcaaggagccagaaagtactgaatgggacagcagtattacatgggcaggggcaact
cagataaacgagagggaaaatgaatctccatctgcatttctaagcaggacagcgtgtgag
gaaactggaggagcagacaagtgtggtatccctgccacaagggaaaacttagatggtggt
gttagaaatgctgatgtcaaacttcaaggaacagtagatcagagtgttaccacagcgaat
gccagcagtaacacctctcaggcagaaactgtaaccagttatgttcaggaagcaccagca
tcgccttccagtcaactgccttcccccaggacttccttcttagagtgtccagagagagag
ccattgatactgagactgccaaagagatttgtcagcagatcctcgtggtttgatttccct
gaagaaaaaatgtag
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