Oenanthe melanoleuca (Eastern black-eared wheatear): 130265370
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Entry
130265370 CDS
T09236
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
KO
K06099
cold shock domain protein A
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130265370 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130265370 (YBX3)
03041 Spliceosome [BR:
oma03041
]
130265370 (YBX3)
Transcription factors [BR:
oma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
130265370 (YBX3)
Spliceosome [BR:
oma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130265370 (YBX3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Rho_RNA_bind
Bim_N
Motif
Other DBs
NCBI-GeneID:
130265370
NCBI-ProteinID:
XP_056370396
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All DBs
Position
1A:complement(7410213..7426979)
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AA seq
281 aa
AA seq
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MSEAPETSAASPAPAAPPVPAAAAAPPAPAAPDAAPKSAAAPGAAVAEAAPAAAAATTAA
AESAKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGE
TVEFDVVEGEKGAEAANVTGPNGVPVEGSRYAADRRRYRRGYFGRRRGPPRSGGEGDMKD
GVTEGGQLQQVHRNPTYRPRYRRGPPRPRPAPVTGEAENKENHHEASAMGQQPLRRGYRR
PYNYRRRPRPASAPAQEGKETKATETPAENPAPVTEQSGAE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgccggagaccagcgccgccagccccgcgcccgccgcgccgcccgtcccg
gccgcggctgccgcgccgcccgcgcccgccgccccggacgccgctcctaagagcgccgcc
gcgccgggtgcggctgttgctgaggcggcccccgctgccgccgctgctacaaccgcggcg
gccgagtcggcgaagaaagtgctggccaccaaagttcttggcacagtgaagtggttcaat
gtcagaaatggatatggctttatcaacagaaatgataccaaagaagatgtgtttgttcat
cagacggcgataaagaaaaacaatccacggaagtacctgcgcagcgttggtgatggagag
actgtagagtttgatgtggtggagggagagaagggtgcagaagcagctaatgtcacaggt
ccaaatggagtccccgtggaaggcagccgctacgctgcagaccggcgccgctatcgacgg
ggctacttcggccgacgccggggcccacctcggagtggtggtgagggagacatgaaggat
ggggtcacagaaggaggacaacttcagcaagtgcacaggaatcctacctaccgtccccgc
taccgcagagggccccctcgcccacgccctgccccggtgactggagaggctgagaacaag
gagaaccatcacgaggccagcgccatgggccagcagccgctgcgccgtggctaccggcgc
ccctacaactaccggcgccggccgcgcccagccagcgccccggcacaggagggcaaagag
acaaaggcaactgaaacacctgctgaaaatcctgctccagtgacagagcagagtggtgct
gagtaa
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