Oenanthe melanoleuca (Eastern black-eared wheatear): 130265528
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Entry
130265528 CDS
T09236
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma02010
ABC transporters
oma04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130265528 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130265528 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oma02000
]
130265528 (ABCA1)
Transporters [BR:
oma02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130265528 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
130265528
NCBI-ProteinID:
XP_056370624
LinkDB
All DBs
Position
Z:complement(33773736..33864732)
Genome browser
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIKDVQKVLGTLRKLGNSSGLDLKLRDFLIDNETFSDFLHHNMSMPSPAVEELLDAGVNL
QQVIVSGYRMRLRDLCNSSTSPEFLTIQNQTAAMDSEAFICNLSKEKLLAAEQAFRANLN
PLKPLQRQLSFNSSLLDLSETVETLRESIRKLVKELLSMKSWSDMRQEVMFLTNVNSSNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMSEVNRTFQDLGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSNNPEDFGAENG
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEAVPTEVRLINKSLELLDERRFWAGIVFT
EMAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEESQDRQHPHPDQKGSSEVCKEEEPLHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSRLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTHKLLDSLLDKPGFGTRCMQGHSIPDTPCTVGQKEWTTA
SVPESVLDIFLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacacagctggggttgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcagcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctacccaactcctggggaatcccctggtattgttggaaacttcaatgcctcg
attgtttcccgcctgttctcggatgccaggaggttactgctgtacagccagcaggacacg
agtataaaggatgtccagaaggtcctgggaacactgcgcaagttgggaaattcctctggc
ttagacttgaaacttcgggatttcctgattgacaatgagacattctctgacttcctccat
cataatatgtccatgccatcacctgcagtagaggagctactggatgcaggggtcaacctc
cagcaggtcattgtatctggttatcgaatgcgactgcgagatctctgcaatagctcgaca
tcacctgagtttcttaccatccaaaatcagacggcagccatggactctgaagccttcatt
tgcaacttgtcaaaggaaaaactccttgcagccgagcaagctttccgtgctaacctgaat
cccctgaagcctcttcagagacagctttctttcaattcctccttattggatctgtcagaa
actgtggaaactttgagagaaagcattcggaagcttgttaaagagctgctgagcatgaag
agctggagtgacatgaggcaggaggtgatgttcctgaccaatgtgaattcctccaactcc
tctactcagatctatcaggctgtgtcgcgcattgtgtgtggccatcctgagggtggagga
ctcaaaattaaatcccttaactggtatgaggacaacaattacaaagcactgtttggaggc
aacagcactgaagatgatgtgattaacttctatgataactccacaacaccctactgcaat
gagctaatgaagaacctggaatccagcccgctttccaggattatctggagggctttgaag
cccttgctgattgggaagatcttgtacactccagatacgccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggatctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaagatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacattgctgaaaggcaaagccctctgggacctgcacttgccagcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaacaatccagaggactttggggcagaaaatggc
tctgtgtacacctgggtggatgccttcaatgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacttggacaaactggaggctgtgcccacagaagtccggctt
attaacaagtccttggagcttctggatgaaaggaggttctgggctggcatagtcttcact
gaaatggctcctgacagcacagaccttcctcaacatgtgaaatacaaaatacgcatggac
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtctggggaggctttgtctacctgcaggatgta
gtagagcaggccatcatcagggttcagacaggcacggagaagaaaactggagtttacgtg
cagcagatgccctacccgtgctatgtggatgacatatttctgcgcgtcatgagccgctcc
atgcctctcttcatgacactagcttggatctactcagtggctgtgataattaagggcatt
gtatatgagaaggaagcccggctgaaggaaaccatgaggattatgggacttgacaatggc
atcctttggttaagctggttcattagcagccttgtccctctcctgatgagtgcaggactg
ctggtgctgatcctgaagatggggaatctactgccttacagcgatcctagtgtggtgttc
attttcctctcaatcttcggtgttgtgaccatcctccagtgcttcctcatcagcaccgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacactgtacctg
ccctatgtgttgtgtgttgcctggcaggaccacatcagcttctcactcaagatttttgcg
agcctgctgtctccagtagcctttggttttggttgcgagtactttgcgctgtttgaggag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatcagctgtcatgatgctgtttgataccttcctgtatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcacaaagtcctattggtttggggaggaatcacaggacaggcagcacccccatcctgac
cagaaggggtcttcagaagtctgcaaggaggaagagccactgcatctgagtcttggtgtt
tccatccagaacttggtcaaggtttaccgtgatggcaagaaagttgctgtagatggtctt
actcttaacttctatgaaggacaaatcacctcttttctgggacataatggagcagggaaa
accactactatgtccattttgactggcttgttccccccaacttcgggtacagccttcatc
ctgggcaaagatatccgctctgagcttagcaccatcagacagaacctgggtgtatgtcca
caacacaatgtgctgtttgacttgctgactgtggaggagcacatctggttctatgctcgg
ctcaaagggctgccggaaaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggtttgcctcacaaactgaaagctaggacaagcaggctctctggtggcatgcagaggaag
ctctctgttgctttagcattcgttggtggctccaaagttgtcattctggatgagcctaca
gctggggtggatccttattctcgcagaggaatatgggaactgcttctcaagtatcggcaa
ggtcgcactatcattctctccacgcaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggttcttctctcttcctgaagaac
cagctgggaacaggctattatttgaccctggtcaaaaaggatgtggattcctctctgagc
tcctgccgaaacagcagcagcacagtttcgtatctgaaaaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacacattgacaatagatgtc
tctgcaatttcaaatctcattacgaaacatgttcctgaggcaagactggtagaggacata
ggccatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggag
ctgttccatgaaattgatgaccgtctttctgatcttggcatttccagctatggcatctct
gaaactactctggaagagatcttcctgaaagtggctgatgatagtggtgtggatgcagaa
acctcagatggtacattgccagccagaaggaacagacgtgtatttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgatcctaacgactcagacatagatcca
gcagaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccagatg
aagggctggaagctcacccagcagcagttcatggctctgttgtggaagaggatgctcatt
gccaagagaagccggaagggcttttttgcccagattgtgctgccagctgtctttgtgtgt
attgctctcatgttcagcctgatcgttcctccttttgggaagtatcccagcctggaatta
caaccttggatgtatgatgagcagtacactttcattagcaacgatgctccagaagatgca
ggcactcacaagcttttggactcccttcttgataagccggggtttgggacacgctgtatg
caaggacattccatcccagatactccttgcactgtggggcagaaggaatggaccactgct
tcagttccagagtcagtcctggacatcttcctgaaaggcaactggagcatggagaatcct
tccccatcttgtgaatgtagcagtgagaagatcaagaagatgctgcctgtgtgcccccct
ggtgcaggtggcctaccacccccacagcgtgagcaagacacggctgacatcctccagaat
ctgacaggccgcaatatatcagactaccttgtgaagacctatgcccagatcattgggaaa
agcttaaagaataaaatctgggtgaacgagttcaggtatggtggcttttccttgggagcc
agcagttcccttgtgcttcccccaagccatgaagtcactgatgccattaaacaggttaag
aaaattttggagctggcacaggggagttctggggatcgatttctcaacagtttatcaagt
ttcatgaaaggcctggatacaaagaacaacgtgaaggtgtggtttaacaacaaaggctgg
catgccattgcatccttcctgaatgtgatcaacaatgccatccttcgggccaacctccag
caaggtgaaaaccccagtgcttatgggatcactgccttcaatcacccactcaatctcacc
aagcagcagctctctgaagtagctctgatgaccacctctgtggatgtcctagtgtccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaggaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctactgg
ctggccaattttgtgtgggatatgtgcaactacattgttccagccacactagttgtcatc
atcttcatctgcttccaacagaagtcctatgtatcttcctccaacttgcctgtgctggct
ctccttctgtttctctatgggtggtccatcacacctctcatgtacccagcctcctttgtg
ttcaaaatacctagcacagcgtatgttgtgctgaccagtgtgaatctcttcattggcatc
aatgggagtgtggccacctttgtcctggagcttttcaccaacaataagctgaaggacatc
aatgacatcctgaagtctgtcttcctcatcttcccccacttctgcctgggccggggactc
attgacatggtgaaaaaccaggctatggctgatgctctagagagatttggagagaatcgt
tttgtgtcccctctgtcatgggacctggtgggaagaaacctctttgccatggcagtagag
ggtgttgtgttttttctcatcacggtgctcatccagtacaggttcttcatcaaacccagg
cctgtctatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagagg
cagaggataattagtggaggaggacagagtgacattttggaaatcaaggagctaaccaag
atttacagaatgaagagaaagccagcagttgataggatctgtgttggaatcccccctgga
gagtgctttggactcctaggagtaaatggtgctggcaagtcatctacttttaagatgcta
actggtgatacagatgtgacgggaggagaagctttcctcaaaggaaacagtatcttgtcc
aacatccaagaagtccatcagaacatggggtactgcccacagttcgatgctgttaatgaa
ctgctgacagggcgagagcacttggagttctttgcactcctgagaggtgttccagagaaa
gaagtctgcaaggttggtgagtgggcaattcgaaaactgggccttgtgaaatacggagag
aaatacgctgggaattacagtggagggaacagacgcaagctttccacagccattgccctc
attggagggccacctgtggtgttcctggatgagcctacaacagggatggatcccaaagca
cgtcgcttcttgtggaactgtgctctgagtgtaatcaaggaggggagatcagtggtgctc
acatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcgataatggtcaat
gggcgattcaggtgtctcggcagtgtccagcacctaaagaataggtttggagacggttac
accatagtggtgagaattgcaggggcaaacccagacttaaaacctgttgaggagttcttt
gggcatgccttccctggaagtgtcctgaaggaaaaacatcggaatatgctgcagtaccaa
cttccctcttcaccatcctccctggccaaaatattcagtattctctcccagaacaagaag
agactccacatagaagactactccgtttctcagaccacacttgaccaagtttttgtaaat
tttgctaaggaccaaagtgatgacgaccatactaaggacctgtcattgcacaaaaaccag
actgtggtagacattgcaatccttaactccttcctgcaagatgagaaggtaaaagaaagt
tgtgtgtga
DBGET
integrated database retrieval system
