Oenanthe melanoleuca (Eastern black-eared wheatear): 130266569
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Entry
130266569 CDS
T09236
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03013
Nucleocytoplasmic transport
oma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130266569 (UPF3A)
03015 mRNA surveillance pathway
130266569 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130266569 (UPF3A)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130266569 (UPF3A)
mRNA cycle factors
P-body specific factors
130266569 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
130266569
NCBI-ProteinID:
XP_056371829
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All DBs
Position
1:complement(86131387..86157765)
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AA seq
528 aa
AA seq
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MRRSRPGPPGSPARSRQPCGRSVLARFPPGCGRGGSERSEREAGPGPGRRLHTRLMDAPP
LQESPRRDTDAPPNPPPPPSPPSALPPPLHPAPGKQREEKKTALSKVVIRRLPPCLTKEQ
LEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLFRDRFDGYVFIDNKGLE
YPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLENYCTDEDKICANPEILLGEIE
AKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRLREEEKRKRREEERR
KRKEVEKQKKISEKEIRIKLLKKPEKGDELVSEKHKEKGEEADIEENKWDKSPGSGSIKS
KSLESSLKELKERSQNDSDKEQRDLERRFREKEPERQRYRLDDGRKHRTHYEFDKFMRRN
EEELKWGKGYNQDRGKKGNYNYSFTVEAVDKLGKEDKCDDMASKKERIRNKDRPAMQLYQ
PGARIRTHMGPTSKTYDCSGKSFEDALDKKYEADNSTGASSEKTEEAE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgctcccggccaggcccgccggggagccccgcgcgctcccgccagccctgcggc
cgttccgttctcgcgaggtttccgccgggctgcggccgcggcggctccgagcgctcggag
cgggaggcggggccggggccgggccggcggctccacacgcggctcatggacgctccgccg
ctgcaggagtcgccgcgccgcgacacggacgctccgccgaacccgccgccgccgccttcc
ccgccgtccgcgctgccgccgccgcttcacccggcgccggggaaacagcgggaggagaag
aaaacggcgctgagcaaagtggttattcgaaggcttcctccttgtctaaccaaggagcaa
ctggaggaacagctgcatcctctacctgcccatgattattttgagttttgcactgctgat
cccagcctttatcctcatctctactcaagagcatacattaactttagaaatcctgaggac
atccttctttttagagatcgctttgatggctatgtcttcattgataataaaggtttggaa
tatcctgcagtggttgagtttgctccattccagaagatttcaaaaaagaagctgaagaag
aaagatgccaaagctgggagcattgaagacgatccagaatatagaaaatttttagagaat
tattgtactgatgaagacaagatctgtgccaatcctgagattcttttgggagagattgag
gccaaaacaagggaactcattgctagaagaacaacaccccttttggaatatattaaaaat
agaaaattagaaaagcagagaatacgagaagagaagagagaagaacgaaggcggagagaa
ttggagaagaagcgtttgcgggaggaagagaaaaggaagcgcagagaagaagaaagacgt
aaaagaaaagaagtggagaagcaaaagaagatttctgaaaaagaaataaggatcaagctt
ctcaagaagcctgaaaaaggagatgagctggtcagtgaaaagcacaaagaaaaaggtgaa
gaagctgacattgaggaaaacaaatgggataaatcacctggatctgggagcataaaatcc
aaatctttggagagttcactgaaagaacttaaggaaaggtcacaaaatgatagtgacaaa
gagcaaagagatttggagagaagatttcgagaaaaagaacctgaaagacaaaggtatcga
ttggatgatggcagaaagcatagaactcactatgagtttgacaagtttatgagaaggaat
gaagaagagctgaaatgggggaaaggatacaaccaagacagaggaaagaaagggaactac
aactacagcttcactgtggaggcagtagacaaactgggtaaagaggacaagtgtgatgac
atggcatccaaaaaggagcgcataagaaataaggatcgtccagccatgcagttgtaccag
ccaggagctcgcatccgaacccatatgggacctacaagtaaaacctatgactgcagtggg
aaatcctttgaagatgctcttgataaaaagtatgaggcagataattcaactggagctagt
tctgaaaagactgaagaagcagaataa
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